Literature DB >> 25368324

The biosynthesis of UDP-d-FucNAc-4N-(2)-oxoglutarate (UDP-Yelosamine) in Bacillus cereus ATCC 14579: Pat and Pyl, an aminotransferase and an ATP-dependent Grasp protein that ligates 2-oxoglutarate to UDP-4-amino-sugars.

Soyoun Hwang1, Zi Li2, Yael Bar-Peled1, Avi Aronov1, Jaime Ericson1, Maor Bar-Peled3.   

Abstract

Surface glycan switching is often observed when micro-organisms transition between different biotic and abiotic niches, including biofilms, although the advantages of this switching to the organism are not well understood. Bacillus cereus grown in a biofilm-inducing medium has been shown to synthesize an unusual cell wall polysaccharide composed of the repeating subunit →6)Gal(α1-2)(2-R-hydroxyglutar-5-ylamido)Fuc2NAc4N(α1-6)GlcNAc(β1→, where galactose is linked to the hydroxyglutarate moiety of FucNAc-4-amido-(2)-hydroxyglutarate. The molecular mechanism involved in attaching 2-hydroxyglutarate to 4-amino-FucNAc has not been determined. Here, we show two genes in B. cereus ATCC 14579 encoding enzymes involved in the synthesis of UDP-FucNAc-4-amido-(2)-oxoglutarate (UDP-Yelosamine), a modified UDP-sugar not previously reported to exist. Using mass spectrometry and real time NMR spectroscopy, we show that Bc5273 encodes a C4″-aminotransferase (herein referred to as Pat) that, in the presence of pyridoxal phosphate, transfers the primary amino group of l-Glu to C-4″ of UDP-4-keto-6-deoxy-d-GlcNAc to form UDP-4-amino-FucNAc and 2-oxoglutarate. Pat also converts 4-keto-xylose, 4-keto-glucose, and 4-keto-2-acetamido-altrose to their corresponding UDP-4-amino-sugars. Bc5272 encodes a carboxylate-amine ligase (herein referred as Pyl) that, in the presence of ATP and Mg(II), adds 2-oxoglutarate to the 4-amino moiety of UDP-4-amino-FucNAc to form UDP-Yelosamine and ADP. Pyl is also able to ligate 2-oxoglutarate to other 4-amino-sugar derivatives to form UDP-Yelose, UDP-Solosamine, and UDP-Aravonose. Characterizing the metabolic pathways involved in the formation of modified nucleotide sugars provides a basis for understanding some of the mechanisms used by bacteria to modify or alter their cell surface polysaccharides in response to changing growth and environmental challenges.
© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Bacterial Metabolism; Biofilm; Carbohydrate Biosynthesis; Enzyme Catalysis; Glycobiology

Mesh:

Substances:

Year:  2014        PMID: 25368324      PMCID: PMC4271244          DOI: 10.1074/jbc.M114.614917

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  27 in total

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Journal:  J Biol Chem       Date:  2003-04-18       Impact factor: 5.157

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Authors:  Sarawut Jitrapakdee; John C Wallace
Journal:  Curr Protein Pept Sci       Date:  2003-06       Impact factor: 3.272

3.  A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity.

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4.  Synapsin I is structurally similar to ATP-utilizing enzymes.

Authors:  L Esser; C R Wang; M Hosaka; C S Smagula; T C Südhof; J Deisenhofer
Journal:  EMBO J       Date:  1998-02-16       Impact factor: 11.598

5.  Improved spectral resolution in cosy 1H NMR spectra of proteins via double quantum filtering.

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Journal:  Biochem Biophys Res Commun       Date:  1983-12-16       Impact factor: 3.575

6.  Overcoming the overlap problem in the assignment of 1H NMR spectra of larger proteins by use of three-dimensional heteronuclear 1H-15N Hartmann-Hahn-multiple quantum coherence and nuclear Overhauser-multiple quantum coherence spectroscopy: application to interleukin 1 beta.

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Journal:  Biochemistry       Date:  1989-07-25       Impact factor: 3.162

7.  Molecular basis of glutathione synthetase deficiency and a rare gene permutation event.

Authors:  G Polekhina; P G Board; R R Gali; J Rossjohn; M W Parker
Journal:  EMBO J       Date:  1999-06-15       Impact factor: 11.598

8.  Vancomycin resistance: structure of D-alanine:D-alanine ligase at 2.3 A resolution.

Authors:  C Fan; P C Moews; C T Walsh; J R Knox
Journal:  Science       Date:  1994-10-21       Impact factor: 47.728

9.  Structure of the polysaccharide chain of the lipopolysaccharide from Flexibacter maritimus.

Authors:  Evgeny Vinogradov; Leann L MacLean; Elizabeth M Crump; Malcolm B Perry; William W Kay
Journal:  Eur J Biochem       Date:  2003-04

10.  A common fold for peptide synthetases cleaving ATP to ADP: glutathione synthetase and D-alanine:d-alanine ligase of Escherichia coli.

Authors:  C Fan; P C Moews; Y Shi; C T Walsh; J R Knox
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-14       Impact factor: 11.205

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  6 in total

Review 1.  Enzymatic strategies and biocatalysts for amide bond formation: tricks of the trade outside of the ribosome.

Authors:  Anwesha Goswami; Steven G Van Lanen
Journal:  Mol Biosyst       Date:  2014-11-24

2.  A four-gene operon in Bacillus cereus produces two rare spore-decorating sugars.

Authors:  Zi Li; Thiya Mukherjee; Kyle Bowler; Sholeh Namdari; Zachary Snow; Sarah Prestridge; Alexandra Carlton; Maor Bar-Peled
Journal:  J Biol Chem       Date:  2017-03-15       Impact factor: 5.157

3.  Functional Characterization of UDP-apiose Synthases from Bryophytes and Green Algae Provides Insight into the Appearance of Apiose-containing Glycans during Plant Evolution.

Authors:  James Smith; Yiwen Yang; Shahar Levy; Oluwatoyin Oluwayemi Adelusi; Michael G Hahn; Malcolm A O'Neill; Maor Bar-Peled
Journal:  J Biol Chem       Date:  2016-08-22       Impact factor: 5.157

4.  Biosynthesis of three N-acetylaminosugar-conjugated flavonoids using engineered Escherichia coli.

Authors:  A Ra Cho; Su Jin Lee; Bong Gyu Kim; Joong-Hoon Ahn
Journal:  Microb Cell Fact       Date:  2016-10-24       Impact factor: 5.328

5.  Proteomics identifies Bacillus cereus EntD as a pivotal protein for the production of numerous virulence factors.

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Journal:  Front Microbiol       Date:  2015-10-07       Impact factor: 5.640

6.  Identification of an apiosyltransferase in the plant pathogen Xanthomonas pisi.

Authors:  James Amor Smith; Maor Bar-Peled
Journal:  PLoS One       Date:  2018-10-18       Impact factor: 3.240

  6 in total

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