Literature DB >> 10369661

Molecular basis of glutathione synthetase deficiency and a rare gene permutation event.

G Polekhina1, P G Board, R R Gali, J Rossjohn, M W Parker.   

Abstract

Glutathione synthetase (GS) catalyses the production of glutathione from gamma-glutamylcysteine and glycine in an ATP-dependent manner. Malfunctioning of GS results in disorders including metabolic acidosis, 5-oxoprolinuria, neurological dysfunction, haemolytic anaemia and in some cases is probably lethal. Here we report the crystal structure of human GS (hGS) at 2.1 A resolution in complex with ADP, two magnesium ions, a sulfate ion and glutathione. The structure indicates that hGS belongs to the recently identified ATP-grasp superfamily, although it displays no detectable sequence identity with other family members including its bacterial counterpart, Escherichia coli GS. The difficulty in identifying hGS as a member of the family is due in part to a rare gene permutation which has resulted in a circular shift of the conserved secondary structure elements in hGS with respect to the other known ATP-grasp proteins. Nevertheless, it appears likely that the enzyme shares the same general catalytic mechanism as other ligases. The possibility of cyclic permutations provides an insight into the evolution of this family and will probably lead to the identification of new members. Mutations that lead to GS deficiency have been mapped onto the structure, providing a molecular basis for understanding their effects.

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Year:  1999        PMID: 10369661      PMCID: PMC1171401          DOI: 10.1093/emboj/18.12.3204

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  26 in total

1.  The structure of the human glutathione synthetase gene.

Authors:  L Whitbread; R R Gali; P G Board
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2.  A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity.

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Review 3.  Structural classification of proteins: new superfamilies.

Authors:  A G Murzin
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Authors:  L Esser; C R Wang; M Hosaka; C S Smagula; T C Südhof; J Deisenhofer
Journal:  EMBO J       Date:  1998-02-16       Impact factor: 11.598

5.  Structure of carbamoyl phosphate synthetase: a journey of 96 A from substrate to product.

Authors:  J B Thoden; H M Holden; G Wesenberg; F M Raushel; I Rayment
Journal:  Biochemistry       Date:  1997-05-27       Impact factor: 3.162

6.  Three-dimensional structure of the biotin carboxylase subunit of acetyl-CoA carboxylase.

Authors:  G L Waldrop; I Rayment; H M Holden
Journal:  Biochemistry       Date:  1994-08-30       Impact factor: 3.162

7.  A pseudo-michaelis quaternary complex in the reverse reaction of a ligase: structure of Escherichia coli B glutathione synthetase complexed with ADP, glutathione, and sulfate at 2.0 A resolution.

Authors:  T Hara; H Kato; Y Katsube; J Oda
Journal:  Biochemistry       Date:  1996-09-17       Impact factor: 3.162

8.  Three-dimensional structure of the glutathione synthetase from Escherichia coli B at 2.0 A resolution.

Authors:  H Yamaguchi; H Kato; Y Hata; T Nishioka; A Kimura; J Oda; Y Katsube
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9.  The crystal structure of succinyl-CoA synthetase from Escherichia coli at 2.5-A resolution.

Authors:  W T Wolodko; M E Fraser; M N James; W A Bridger
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Review 10.  Glutathione: an overview of biosynthesis and modulation.

Authors:  M E Anderson
Journal:  Chem Biol Interact       Date:  1998-04-24       Impact factor: 5.192

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  32 in total

1.  Circularly permuted proteins in the protein structure database.

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3.  Glutathione synthetase homologs encode alpha-L-glutamate ligases for methanogenic coenzyme F420 and tetrahydrosarcinapterin biosyntheses.

Authors:  Hong Li; Huimin Xu; David E Graham; Robert H White
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-08       Impact factor: 11.205

4.  Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer.

Authors:  Renato H-J Weiße; Annette Faust; Marcel Schmidt; Peter Schönheit; Axel J Scheidig
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

Review 5.  Resilience of biochemical activity in protein domains in the face of structural divergence.

Authors:  Dapeng Zhang; Lakshminarayan M Iyer; A Maxwell Burroughs; L Aravind
Journal:  Curr Opin Struct Biol       Date:  2014-06-19       Impact factor: 6.809

6.  Non-homologous isofunctional enzymes: a systematic analysis of alternative solutions in enzyme evolution.

Authors:  Marina V Omelchenko; Michael Y Galperin; Yuri I Wolf; Eugene V Koonin
Journal:  Biol Direct       Date:  2010-04-30       Impact factor: 4.540

7.  Comparison of the functions of glutathionylspermidine synthetase/amidase from E. coli and its predicted homologues YgiC and YjfC.

Authors:  Li Sui; John C Warren; Janelle Pn Russell; Nina V Stourman
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8.  Structural basis for evolution of product diversity in soybean glutathione biosynthesis.

Authors:  Ashley Galant; Kiani A J Arkus; Chloe Zubieta; Rebecca E Cahoon; Joseph M Jez
Journal:  Plant Cell       Date:  2009-11-30       Impact factor: 11.277

9.  Human hereditary glutathione synthetase deficiency: kinetic properties of mutant enzymes.

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10.  Structure of Trypanosoma brucei glutathione synthetase: domain and loop alterations in the catalytic cycle of a highly conserved enzyme.

Authors:  Paul K Fyfe; Magnus S Alphey; William N Hunter
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