Literature DB >> 25332047

Conformational switching in pyruvic acid isolated in Ar and N₂ matrixes: spectroscopic analysis, anharmonic simulation, and tunneling.

Igor Reva1, Cláudio M Nunes1, Malgorzata Biczysko2,3, Rui Fausto1.   

Abstract

Monomers of pyruvic acid (PA) isolated in cryogenic argon and nitrogen matrixes were characterized by mid- and near-infrared spectroscopy. Interpretation of the experiments was aided by fully anharmonic calculations of the fundamental modes, overtones, and combinations up to two quanta, including their infrared intensities. The initially dominating PA conformer (Tc) has a cis CCOH arrangement and is stabilized by a strong intramolecular H-bond. Selective near-infrared excitation of Tc at the first OH overtone (6630 cm(-1) in Ar, 6643 cm(-1) in N2) induced a large scale conformational conversion to the higher-energy conformer (Tt) with trans CCOH arrangement. Tt was then converted back to Tc by selective NIR irradiation at the first Tt OH overtone (6940 cm(-1) in Ar, 6894 cm(-1) in N2). In N2 matrix, the Tt form was stabilized due to interaction between the OH group and the matrix molecules. This stabilization manifested itself in the absence of Tt → Tc relaxation and in a considerable change of the vibrational Tt signature upon going from argon to nitrogen matrix. In argon, the Tt form spontaneously decayed back to Tc in the dark (characteristic lifetime +16 h). In the presence of broad-band near-infrared light, the Tt → Tc relaxation speed considerably increased. The decay mechanisms are discussed.

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Year:  2014        PMID: 25332047     DOI: 10.1021/jp509578c

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  5 in total

1.  CC/DFT Route toward Accurate Structures and Spectroscopic Features for Observed and Elusive Conformers of Flexible Molecules: Pyruvic Acid as a Case Study.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Paola Cimino; Emanuele Penocchio; Cristina Puzzarini
Journal:  J Chem Theory Comput       Date:  2015-08-07       Impact factor: 6.006

2.  Identification of Serine Conformers by Matrix-Isolation IR Spectroscopy Aided by Near-Infrared Laser-Induced Conformational Change, 2D Correlation Analysis, and Quantum Mechanical Anharmonic Computations.

Authors:  Eszter E Najbauer; Gábor Bazsó; Rui Apóstolo; Rui Fausto; Malgorzata Biczysko; Vincenzo Barone; György Tarczay
Journal:  J Phys Chem B       Date:  2015-08-05       Impact factor: 2.991

3.  Complexes of Glycolic Acid with Nitrogen Isolated in Argon Matrices. II. Vibrational Overtone Excitations.

Authors:  Iwona Kosendiak; Jussi M E Ahokas; Justyna Krupa; Jan Lundell; Maria Wierzejewska
Journal:  Molecules       Date:  2019-09-06       Impact factor: 4.411

4.  The Virtual Multifrequency Spectrometer: a new paradigm for spectroscopy.

Authors:  Vincenzo Barone
Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2016 Mar/Apr

5.  Anharmonic Effects on Vibrational Spectra Intensities: Infrared, Raman, Vibrational Circular Dichroism, and Raman Optical Activity.

Authors:  Julien Bloino; Malgorzata Biczysko; Vincenzo Barone
Journal:  J Phys Chem A       Date:  2015-12-01       Impact factor: 2.781

  5 in total

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