| Literature DB >> 25330812 |
Emmanuel Fajardo, Carol Metcalf, Elton Mbofana, Charlotte van Vyve, Dhodho Munyaradzi, Sandra Simons, Misheck Kuhudzayi, Helen Bygrave.
Abstract
BACKGROUND: CD4+ T-cell testing of blood specimens collected in standard EDTA Vacutainer tubes and transported at ambient temperature, must be completed within 48 hours with the BD FACSCount™ flow cytometer, restricting specimen collection in remote clinics with no on-site testing and limited specimen transport services. We conducted a study in Buhera District, Zimbabwe, to assess the stability and accuracy of CD4+ T-cell results of samples collected in Stabilization Tubes (ST) and stored at ambient temperature for varying time periods.Entities:
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Year: 2014 PMID: 25330812 PMCID: PMC4209078 DOI: 10.1186/s12879-014-0553-9
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Participant characteristics
| Characteristic | Value |
|---|---|
| Total patients: N | 51 |
| Female: n, (%) | 35 (68.6) |
| Age (years): median, (IQR) | 34, (28 - 45) |
| WHO stage: n, (%) | |
| 1 | 21 (40.7) |
| 2 | 22 (43.3) |
| 3 | 5 (10.0) |
| 4 | 3 (6.0) |
| Reason for testing: n, (%) | |
| ART eligibility | 13 (25.0) |
| ART monitoring | 38 (75.0) |
| CD4+ T cells: median, (IQR) | 507.5, (271.75 - 744.5) |
Figure 1Comparison of CD4 counts measured on ST (index test), at different time intervals, and EDTA at day 0 (reference test). A: box-and-whisker plots displaying the median and upper and lower quartiles. B and C: scatter plots displaying correlation. D and E: Bland-Altman plots showing the mean difference (solid line) and 95% lower limits of agreement (dotted lines). Blue vertical dashed lines indicate CD4 T cells thresholds of 350 cell/μL and 500 cells/μL.
Summary statistics for correlation and agreement between CD4+ T cells in ST samples measured on Day 7 and Day 14 (index test), and CD4+ T cells in EDTA samples measured on Day 0 (reference test)
| Test | N | Median | p-value (EDTA Day 0) | R2 | Spearman's rho | Mean bias (95% CI) | Standard deviation of bias | Limits of agreement |
|---|---|---|---|---|---|---|---|---|
| CD4 ST Day 7 | 49 | 480 | 0.30 | 0.957 | 0.977 | -4.89 (-18.34 to 8.54) | 46.81 | -98.52 to 88.72 |
| CD4 ST Day 14 | 19 | 500 | 0.71 | 0.936 | 0.963 | 5.10 (-20.13 to 30.34) | 52.35 | -99.61 to 109.82 |
| CD4% ST Day 7 | 46 | 24.15 | 0.17 | 0.936 | 0.948 | -0.53 (-1.14 to 0.06) | 2.02 | -4.59 to 3.51 |
Figure 2Comparison of CD4% measured on ST (index test), at different time intervals, and EDTA at day 0 (reference test). A: box-and-whisker plots showing the median and upper and lower quartiles. B: scatter plot displaying correlation. C: Bland-Altman plots showing the mean difference (solid line) and 95% lower limits of agreement (dotted lines).
Clinical agreement and misclassification rates between CD4 measured on EDTA Day 0 (reference test) and CD4 measured on ST Day 7 and Day 14 (index test) at CD4 thresholds for ART eligibility of 350 cells/μL and 500 cells/μL
| EDTA Day 0 | ST Day 7 | Sensitivity: 100 (78.2 – 100); PPV: 100 (78.2 – 100) | ||
| ≤350 | ≤350 | Total | Specificity: 100 (89.7 – 100); NPV: 100 (89.7 – 100) | |
| ≥350 | 15 | 0 | 15 | Total misclassification rate: 0 |
| ≥350 | 0 | 34 | 34 | Upward misclassification rate: 0 |
| Total | 15 | 34 | 49 | Downward misclassification rate: 0 |
| EDTA Day 0 | ST Day 14 | Sensitivity: 83.3 (35.9 – 99.6); PPV: 100 (47.8 – 100) | ||
| ≤350 | ≥350 | Total | Specificity: 100 (75.3 – 100); NPV: 92.9 (66.1 – 99.8) | |
| ≤350 | 5 | 1 | 6 | Total misclassification rate: 5.2 |
| ≥350 | 0 | 13 | 13 | Upward misclassification rate: 5.2 (1/19) |
| Total | 5 | 14 | 19 | Downward misclassification rate: 0 |
| EDTA Day 0 | ST Day 7 | Sensitivity: 100 (85.2 – 100); PPV: 88.5 (69.8 – 97.6) | ||
| ≤500 | ≥500 | Total | Specificity: 88.5 (69.8 – 97.6); NPV: 100 (85.2 – 100) | |
| ≥500 | 23 | 0 | 23 | Total misclassification rate: 6.1 (3/49) |
| ≤500 | 3 | 23 | 26 | Upward misclassification rate: 0 |
| Total | 26 | 23 | 49 | Downward misclassification rate: 6.1 (3/49) |
| EDTA Day 0 | ST Day 14 | Sensitivity: 88.9 (51.8 – 99.7); PPV: 80.0 (44.4 – 97.5) | ||
| ≤500 | ≥500 | Total | Specificity: 80.0 (44.4 – 97.5): NPV: 88.9 (51.8 – 99.7) | |
| ≥500 | 8 | 1 | 9 | Total misclassification rate: 15.7 (3/19) |
| ≥500 | 2 | 8 | 10 | Upward misclassification rate: 5.2 (1/19) |
| Total | 10 | 9 | 19 | Downward misclassification rate: 10.5 (2/19) |