Literature DB >> 25327757

Processing of preribosomal RNA in Saccharomyces cerevisiae.

Antonio Fernández-Pevida1, Dieter Kressler, Jesús de la Cruz.   

Abstract

Most, if not all RNAs, are transcribed as precursors that require processing to gain functionality. Ribosomal RNAs (rRNA) from all organisms undergo both exo- and endonucleolytic processing. Also, in all organisms, rRNA processing occurs inside large preribosomal particles and is coupled to nucleotide modification, folding of the precursor rRNA (pre-rRNA), and assembly of the ribosomal proteins (r-proteins). In this review, we focus on the processing pathway of pre-rRNAs of cytoplasmic ribosomes in the yeast Saccharomyces cerevisiae, without doubt, the organism where this pathway is best characterized. We summarize the current understanding of the rRNA maturation process, particularly focusing on the pre-rRNA processing sites, the enzymes responsible for the cleavage or trimming reactions and the different mechanisms that monitor and regulate the pathway. Strikingly, the overall order of the various processing steps is reasonably well conserved in eukaryotes, perhaps reflecting common principles for orchestrating the concomitant events of pre-rRNA processing and ribosome assembly.
© 2014 John Wiley & Sons, Ltd.

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Year:  2014        PMID: 25327757     DOI: 10.1002/wrna.1267

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  46 in total

Review 1.  IT'S 2 for the price of 1: Multifaceted ITS2 processing machines in RNA and DNA maintenance.

Authors:  Monica C Pillon; Yu-Hua Lo; Robin E Stanley
Journal:  DNA Repair (Amst)       Date:  2019-07-08

2.  Grc3 programs the essential endoribonuclease Las1 for specific RNA cleavage.

Authors:  Monica C Pillon; Mack Sobhany; Mario J Borgnia; Jason G Williams; Robin E Stanley
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-26       Impact factor: 11.205

3.  Arabidopsis small nucleolar RNA monitors the efficient pre-rRNA processing during ribosome biogenesis.

Authors:  Pan Zhu; Yuqiu Wang; Nanxun Qin; Feng Wang; Jia Wang; Xing Wang Deng; Danmeng Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-05       Impact factor: 11.205

4.  Putative group I introns in the eukaryote nuclear internal transcribed spacers.

Authors:  Daniele Corsaro; Danielle Venditti
Journal:  Curr Genet       Date:  2019-08-28       Impact factor: 3.886

Review 5.  Principles of 60S ribosomal subunit assembly emerging from recent studies in yeast.

Authors:  Salini Konikkat; John L Woolford
Journal:  Biochem J       Date:  2017-01-15       Impact factor: 3.857

6.  Atomic modeling of the ITS2 ribosome assembly subcomplex from cryo-EM together with mass spectrometry-identified protein-protein crosslinks.

Authors:  Shan Wu; Dan Tan; John L Woolford; Meng-Qiu Dong; Ning Gao
Journal:  Protein Sci       Date:  2016-10-13       Impact factor: 6.725

7.  Role of the 40S beak ribosomal protein eS12 in ribosome biogenesis and function in Saccharomyces cerevisiae.

Authors:  Sara Martín-Villanueva; José Fernández-Fernández; Olga Rodríguez-Galán; Julia Fernández-Boraita; Eduardo Villalobo; Jesús de La Cruz
Journal:  RNA Biol       Date:  2020-06-07       Impact factor: 4.652

8.  Proteome distribution between nucleoplasm and nucleolus and its relation to ribosome biogenesis in Arabidopsis thaliana.

Authors:  Denise Palm; Stefan Simm; Katrin Darm; Benjamin L Weis; Maike Ruprecht; Enrico Schleiff; Christian Scharf
Journal:  RNA Biol       Date:  2016-03-16       Impact factor: 4.652

9.  Ribosomal RNA Biogenesis and Its Response to Chilling Stress in Oryza sativa.

Authors:  Runlai Hang; Zhen Wang; Xian Deng; Chunyan Liu; Bin Yan; Chao Yang; Xianwei Song; Beixin Mo; Xiaofeng Cao
Journal:  Plant Physiol       Date:  2018-03-19       Impact factor: 8.340

10.  Immature large ribosomal subunits containing the 7S pre-rRNA can engage in translation in Saccharomyces cerevisiae.

Authors:  Olga Rodríguez-Galán; Juan J García-Gómez; Dieter Kressler; Jesús de la Cruz
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

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