Literature DB >> 25321248

Effect of time discretization of the imaging process on the accuracy of trajectory estimation in fluorescence microscopy.

Yau Wong, Jerry Chao, Zhiping Lin, Raimund J Ober.   

Abstract

In fluorescence microscopy, high-speed imaging is often necessary for the proper visualization and analysis of fast subcellular dynamics. Here, we examine how the speed of image acquisition affects the accuracy with which parameters such as the starting position and speed of a microscopic non-stationary fluorescent object can be estimated from the resulting image sequence. Specifically, we use a Fisher information-based performance bound to investigate the detector-dependent effect of frame rate on the accuracy of parameter estimation. We demonstrate that when a charge-coupled device detector is used, the estimation accuracy deteriorates as the frame rate increases beyond a point where the detector's readout noise begins to overwhelm the low number of photons detected in each frame. In contrast, we show that when an electron-multiplying charge-coupled device (EMCCD) detector is used, the estimation accuracy improves with increasing frame rate. In fact, at high frame rates where the low number of photons detected in each frame renders the fluorescent object difficult to detect visually, imaging with an EMCCD detector represents a natural implementation of the Ultrahigh Accuracy Imaging Modality, and enables estimation with an accuracy approaching that which is attainable only when a hypothetical noiseless detector is used.

Mesh:

Year:  2014        PMID: 25321248      PMCID: PMC4163155          DOI: 10.1364/OE.22.020396

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  11 in total

1.  Chromatin dynamics in interphase cells revealed by tracking in a two-photon excitation microscope.

Authors:  Valeria Levi; QiaoQiao Ruan; Matthew Plutz; Andrew S Belmont; Enrico Gratton
Journal:  Biophys J       Date:  2005-09-08       Impact factor: 4.033

2.  Rab conversion as a mechanism of progression from early to late endosomes.

Authors:  Jochen Rink; Eric Ghigo; Yannis Kalaidzidis; Marino Zerial
Journal:  Cell       Date:  2005-09-09       Impact factor: 41.582

3.  Observation of individual microtubule motor steps in living cells with endocytosed quantum dots.

Authors:  Xiaolin Nan; Peter A Sims; Peng Chen; X Sunney Xie
Journal:  J Phys Chem B       Date:  2005-12-29       Impact factor: 2.991

4.  Visualizing single molecules interacting with nuclear pore complexes by narrow-field epifluorescence microscopy.

Authors:  Weidong Yang; Siegfried M Musser
Journal:  Methods       Date:  2006-08       Impact factor: 3.608

5.  Gaussian approximations of fluorescence microscope point-spread function models.

Authors:  Bo Zhang; Josiane Zerubia; Jean-Christophe Olivo-Marin
Journal:  Appl Opt       Date:  2007-04-01       Impact factor: 1.980

6.  Model-based resolution: applying the theory in quantitative microscopy.

Authors:  A Santos; I T Young
Journal:  Appl Opt       Date:  2000-06-10       Impact factor: 1.980

7.  Limit of the Accuracy of Parameter Estimation for Moving Single Molecules Imaged by Fluorescence Microscopy.

Authors:  Yau Wong; Zhiping Lin; Raimund J Ober
Journal:  IEEE Trans Signal Process       Date:  2011       Impact factor: 4.931

8.  Autonomy and robustness of translocation through the nuclear pore complex: a single-molecule study.

Authors:  Thomas Dange; David Grünwald; Antje Grünwald; Reiner Peters; Ulrich Kubitscheck
Journal:  J Cell Biol       Date:  2008-09-29       Impact factor: 10.539

9.  Live cell imaging of alphaherpes virus anterograde transport and spread.

Authors:  Matthew P Taylor; Radomir Kratchmarov; Lynn W Enquist
Journal:  J Vis Exp       Date:  2013-08-16       Impact factor: 1.355

10.  Ultrahigh accuracy imaging modality for super-localization microscopy.

Authors:  Jerry Chao; Sripad Ram; E Sally Ward; Raimund J Ober
Journal:  Nat Methods       Date:  2013-03-03       Impact factor: 28.547

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  2 in total

1.  Deconvolution of Camera Instrument Response Functions.

Authors:  John H Lewis; Ryan M Jamiolkowski; Michael S Woody; E Michael Ostap; Yale E Goldman
Journal:  Biophys J       Date:  2017-03-28       Impact factor: 4.033

2.  Fisher information theory for parameter estimation in single molecule microscopy: tutorial.

Authors:  Jerry Chao; E Sally Ward; Raimund J Ober
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2016-07-01       Impact factor: 2.129

  2 in total

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