Literature DB >> 25320178

The 19q12 bladder cancer GWAS signal: association with cyclin E function and aggressive disease.

Yi-Ping Fu1, Indu Kohaar1, Lee E Moore2, Petra Lenz3, Jonine D Figueroa2, Wei Tang1, Patricia Porter-Gill1, Nilanjan Chatterjee2, Alexandra Scott-Johnson1, Montserrat Garcia-Closas4, Brian Muchmore1, Dalsu Baris2, Ashley Paquin1, Kris Ylaya5, Molly Schwenn6, Andrea B Apolo7, Margaret R Karagas8, McAnthony Tarway1, Alison Johnson9, Adam Mumy1, Alan Schned8, Liliana Guedez10, Michael A Jones11, Masatoshi Kida12, G M Monawar Hosain13, Nuria Malats14, Manolis Kogevinas15, Adonina Tardon16, Consol Serra17, Alfredo Carrato18, Reina Garcia-Closas19, Josep Lloreta20, Xifeng Wu21, Mark Purdue2, Gerald L Andriole22, Robert L Grubb22, Amanda Black2, Maria T Landi2, Neil E Caporaso2, Paolo Vineis23, Afshan Siddiq24, H Bas Bueno-de-Mesquita25, Dimitrios Trichopoulos26, Börje Ljungberg27, Gianluca Severi28, Elisabete Weiderpass29, Vittorio Krogh30, Miren Dorronsoro31, Ruth C Travis32, Anne Tjønneland33, Paul Brennan34, Jenny Chang-Claude35, Elio Riboli24, Jennifer Prescott36, Constance Chen37, Immaculata De Vivo36, Edward Govannucci38, David Hunter37, Peter Kraft37, Sara Lindstrom37, Susan M Gapstur39, Eric J Jacobs39, W Ryan Diver39, Demetrius Albanes2, Stephanie J Weinstein2, Jarmo Virtamo40, Charles Kooperberg41, Chancellor Hohensee41, Rebecca J Rodabough41, Victoria K Cortessis42, David V Conti43, Manuela Gago-Dominguez44, Mariana C Stern43, Malcolm C Pike45, David Van Den Berg43, Jian-Min Yuan46, Christopher A Haiman43, Olivier Cussenot47, Geraldine Cancel-Tassin48, Morgan Roupret49, Eva Comperat49, Stefano Porru50, Angela Carta50, Sofia Pavanello51, Cecilia Arici50, Giuseppe Mastrangelo51, H Barton Grossman52, Zhaoming Wang53, Xiang Deng53, Charles C Chung53, Amy Hutchinson53, Laurie Burdette53, William Wheeler54, Joseph Fraumeni2, Stephen J Chanock2, Stephen M Hewitt5, Debra T Silverman2, Nathaniel Rothman2, Ludmila Prokunina-Olsson55.   

Abstract

A genome-wide association study (GWAS) of bladder cancer identified a genetic marker rs8102137 within the 19q12 region as a novel susceptibility variant. This marker is located upstream of the CCNE1 gene, which encodes cyclin E, a cell-cycle protein. We performed genetic fine-mapping analysis of the CCNE1 region using data from two bladder cancer GWAS (5,942 cases and 10,857 controls). We found that the original GWAS marker rs8102137 represents a group of 47 linked SNPs (with r(2) ≥ 0.7) associated with increased bladder cancer risk. From this group, we selected a functional promoter variant rs7257330, which showed strong allele-specific binding of nuclear proteins in several cell lines. In both GWASs, rs7257330 was associated only with aggressive bladder cancer, with a combined per-allele OR = 1.18 [95% confidence interval (CI), 1.09-1.27, P = 4.67 × 10(-5)] versus OR = 1.01 (95% CI, 0.93-1.10, P = 0.79) for nonaggressive disease, with P = 0.0015 for case-only analysis. Cyclin E protein expression analyzed in 265 bladder tumors was increased in aggressive tumors (P = 0.013) and, independently, with each rs7257330-A risk allele (P(trend) = 0.024). Overexpression of recombinant cyclin E in cell lines caused significant acceleration of cell cycle. In conclusion, we defined the 19q12 signal as the first GWAS signal specific for aggressive bladder cancer. Molecular mechanisms of this genetic association may be related to cyclin E overexpression and alteration of cell cycle in carriers of CCNE1 risk variants. In combination with established bladder cancer risk factors and other somatic and germline genetic markers, the CCNE1 variants could be useful for inclusion into bladder cancer risk prediction models. ©2014 American Association for Cancer Research.

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Year:  2014        PMID: 25320178      PMCID: PMC4203382          DOI: 10.1158/0008-5472.CAN-14-1531

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  31 in total

Review 1.  Cyclin E in human cancers.

Authors:  R Donnellan; R Chetty
Journal:  FASEB J       Date:  1999-05       Impact factor: 5.191

2.  Prospective study of FGFR3 mutations as a prognostic factor in nonmuscle invasive urothelial bladder carcinomas.

Authors:  Silvia Hernández; Elena López-Knowles; Josep Lloreta; Manolis Kogevinas; Alex Amorós; Adonina Tardón; Alfredo Carrato; Consol Serra; Núria Malats; Francisco X Real
Journal:  J Clin Oncol       Date:  2006-08-01       Impact factor: 44.544

3.  Direct observation of individual endogenous protein complexes in situ by proximity ligation.

Authors:  Ola Söderberg; Mats Gullberg; Malin Jarvius; Karin Ridderstråle; Karl-Johan Leuchowius; Jonas Jarvius; Kenneth Wester; Per Hydbring; Fuad Bahram; Lars-Gunnar Larsson; Ulf Landegren
Journal:  Nat Methods       Date:  2006-10-29       Impact factor: 28.547

4.  Sequence variant on 8q24 confers susceptibility to urinary bladder cancer.

Authors:  Lambertus A Kiemeney; Steinunn Thorlacius; Patrick Sulem; Frank Geller; Katja K H Aben; Simon N Stacey; Julius Gudmundsson; Margret Jakobsdottir; Jon T Bergthorsson; Asgeir Sigurdsson; Thorarinn Blondal; J Alfred Witjes; Sita H Vermeulen; Christina A Hulsbergen-van de Kaa; Dorine W Swinkels; Martine Ploeg; Erik B Cornel; Henk Vergunst; Thorgeir E Thorgeirsson; Daniel Gudbjartsson; Sigurjon A Gudjonsson; Gudmar Thorleifsson; Kari T Kristinsson; Magali Mouy; Steinunn Snorradottir; Donatella Placidi; Marcello Campagna; Cecilia Arici; Kvetoslava Koppova; Eugene Gurzau; Peter Rudnai; Eliane Kellen; Silvia Polidoro; Simonetta Guarrera; Carlotta Sacerdote; Manuel Sanchez; Berta Saez; Gabriel Valdivia; Charlotta Ryk; Petra de Verdier; Annika Lindblom; Klaus Golka; D Timothy Bishop; Margaret A Knowles; Sigfus Nikulasson; Vigdis Petursdottir; Eirikur Jonsson; Gudmundur Geirsson; Baldvin Kristjansson; Jose I Mayordomo; Gunnar Steineck; Stefano Porru; Frank Buntinx; Maurice P Zeegers; Tony Fletcher; Rajiv Kumar; Giuseppe Matullo; Paolo Vineis; Anne E Kiltie; Jeffrey R Gulcher; Unnur Thorsteinsdottir; Augustine Kong; Thorunn Rafnar; Kari Stefansson
Journal:  Nat Genet       Date:  2008-09-14       Impact factor: 38.330

5.  Genetic variation in the prostate stem cell antigen gene PSCA confers susceptibility to urinary bladder cancer.

Authors:  Xifeng Wu; Yuanqing Ye; Lambertus A Kiemeney; Patrick Sulem; Thorunn Rafnar; Giuseppe Matullo; Daniela Seminara; Teruhiko Yoshida; Norihisa Saeki; Angeline S Andrew; Colin P Dinney; Bogdan Czerniak; Zuo-feng Zhang; Anne E Kiltie; D Timothy Bishop; Paolo Vineis; Stefano Porru; Frank Buntinx; Eliane Kellen; Maurice P Zeegers; Rajiv Kumar; Peter Rudnai; Eugene Gurzau; Kvetoslava Koppova; Jose Ignacio Mayordomo; Manuel Sanchez; Berta Saez; Annika Lindblom; Petra de Verdier; Gunnar Steineck; Gordon B Mills; Alan Schned; Simonetta Guarrera; Silvia Polidoro; Shen-Chih Chang; Jie Lin; David W Chang; Katherine S Hale; Tadeusz Majewski; H Barton Grossman; Steinunn Thorlacius; Unnur Thorsteinsdottir; Katja K H Aben; J Alfred Witjes; Kari Stefansson; Christopher I Amos; Margaret R Karagas; Jian Gu
Journal:  Nat Genet       Date:  2009-08-02       Impact factor: 38.330

6.  Candidate gene analysis using imputed genotypes: cell cycle single-nucleotide polymorphisms and ovarian cancer risk.

Authors:  Ellen L Goode; Brooke L Fridley; Robert A Vierkant; Julie M Cunningham; Catherine M Phelan; Stephanie Anderson; David N Rider; Kristin L White; V Shane Pankratz; Honglin Song; Estrid Hogdall; Susanne K Kjaer; Alice S Whittemore; Richard DiCioccio; Susan J Ramus; Simon A Gayther; Joellen M Schildkraut; Paul P D Pharaoh; Thomas A Sellers
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2009-03-03       Impact factor: 4.254

7.  Isolation of three novel human cyclins by rescue of G1 cyclin (Cln) function in yeast.

Authors:  D J Lew; V Dulić; S I Reed
Journal:  Cell       Date:  1991-09-20       Impact factor: 41.582

8.  Alternative splicing of human cyclin E.

Authors:  A Sewing; V Rönicke; C Bürger; M Funk; R Müller
Journal:  J Cell Sci       Date:  1994-02       Impact factor: 5.285

9.  A flexible and accurate genotype imputation method for the next generation of genome-wide association studies.

Authors:  Bryan N Howie; Peter Donnelly; Jonathan Marchini
Journal:  PLoS Genet       Date:  2009-06-19       Impact factor: 5.917

10.  Nuclear import of Cdk/cyclin complexes: identification of distinct mechanisms for import of Cdk2/cyclin E and Cdc2/cyclin B1.

Authors:  J D Moore; J Yang; R Truant; S Kornbluth
Journal:  J Cell Biol       Date:  1999-01-25       Impact factor: 10.539

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  19 in total

Review 1.  Low-Molecular-Weight Cyclin E in Human Cancer: Cellular Consequences and Opportunities for Targeted Therapies.

Authors:  Joseph A Caruso; Mylinh T Duong; Jason P W Carey; Kelly K Hunt; Khandan Keyomarsi
Journal:  Cancer Res       Date:  2018-09-07       Impact factor: 12.701

2.  Tumour-suppressive microRNA-424-5p directly targets CCNE1 as potential prognostic markers in epithelial ovarian cancer.

Authors:  Jingjing Liu; Zhenpeng Gu; Yujie Tang; Junmei Hao; Cuiping Zhang; Xingsheng Yang
Journal:  Cell Cycle       Date:  2018-01-02       Impact factor: 4.534

3.  Diet quality, common genetic polymorphisms, and bladder cancer risk in a New England population-based study.

Authors:  Reno C Leeming; Stella Koutros; Margaret R Karagas; Dalsu Baris; Molly Schwenn; Alison Johnson; Michael S Zens; Alan R Schned; Nathaniel Rothman; Debra T Silverman; Michael N Passarelli
Journal:  Eur J Nutr       Date:  2022-06-27       Impact factor: 5.614

4.  Transcription Factor KLF5 Binds a Cyclin E1 Polymorphic Intronic Enhancer to Confer Increased Bladder Cancer Risk.

Authors:  Jillian M Pattison; Valeriya Posternak; Michael D Cole
Journal:  Mol Cancer Res       Date:  2016-08-11       Impact factor: 5.852

5.  Genome-wide association studies and epigenome-wide association studies go together in cancer control.

Authors:  Mukesh Verma
Journal:  Future Oncol       Date:  2016-04-15       Impact factor: 3.404

6.  Identification of a novel susceptibility locus at 13q34 and refinement of the 20p12.2 region as a multi-signal locus associated with bladder cancer risk in individuals of European ancestry.

Authors:  Jonine D Figueroa; Candace D Middlebrooks; A Rouf Banday; Yuanqing Ye; Montserrat Garcia-Closas; Nilanjan Chatterjee; Stella Koutros; Lambertus A Kiemeney; Thorunn Rafnar; Timothy Bishop; Helena Furberg; Giuseppe Matullo; Klaus Golka; Manuela Gago-Dominguez; Jack A Taylor; Tony Fletcher; Afshan Siddiq; Victoria K Cortessis; Charles Kooperberg; Olivier Cussenot; Simone Benhamou; Jennifer Prescott; Stefano Porru; Colin P Dinney; Núria Malats; Dalsu Baris; Mark P Purdue; Eric J Jacobs; Demetrius Albanes; Zhaoming Wang; Charles C Chung; Sita H Vermeulen; Katja K Aben; Tessel E Galesloot; Gudmar Thorleifsson; Patrick Sulem; Kari Stefansson; Anne E Kiltie; Mark Harland; Mark Teo; Kenneth Offit; Joseph Vijai; Dean Bajorin; Ryan Kopp; Giovanni Fiorito; Simonetta Guarrera; Carlotta Sacerdote; Silvia Selinski; Jan G Hengstler; Holger Gerullis; Daniel Ovsiannikov; Meinolf Blaszkewicz; Jose Esteban Castelao; Manuel Calaza; Maria Elena Martinez; Patricia Cordeiro; Zongli Xu; Vijayalakshmi Panduri; Rajiv Kumar; Eugene Gurzau; Kvetoslava Koppova; H Bas Bueno-De-Mesquita; Börje Ljungberg; Françoise Clavel-Chapelon; Elisabete Weiderpass; Vittorio Krogh; Miren Dorronsoro; Ruth C Travis; Anne Tjønneland; Paul Brennan; Jenny Chang-Claude; Elio Riboli; David Conti; Marianna C Stern; Malcolm C Pike; David Van Den Berg; Jian-Min Yuan; Chancellor Hohensee; Rebecca P Jeppson; Geraldine Cancel-Tassin; Morgan Roupret; Eva Comperat; Constance Turman; Immaculata De Vivo; Edward Giovannucci; David J Hunter; Peter Kraft; Sara Lindstrom; Angela Carta; Sofia Pavanello; Cecilia Arici; Giuseppe Mastrangelo; Ashish M Kamat; Liren Zhang; Yilei Gong; Xia Pu; Amy Hutchinson; Laurie Burdett; William A Wheeler; Margaret R Karagas; Alison Johnson; Alan Schned; G M Monawar Hosain; Molly Schwenn; Manolis Kogevinas; Adonina Tardón; Consol Serra; Alfredo Carrato; Reina García-Closas; Josep Lloreta; Gerald Andriole; Robert Grubb; Amanda Black; W Ryan Diver; Susan M Gapstur; Stephanie Weinstein; Jarmo Virtamo; Christopher A Haiman; Maria Teresa Landi; Neil E Caporaso; Joseph F Fraumeni; Paolo Vineis; Xifeng Wu; Stephen J Chanock; Debra T Silverman; Ludmila Prokunina-Olsson; Nathaniel Rothman
Journal:  Hum Mol Genet       Date:  2016-01-04       Impact factor: 6.150

7.  Tumour-suppressive microRNA-144-5p directly targets CCNE1/2 as potential prognostic markers in bladder cancer.

Authors:  R Matsushita; N Seki; T Chiyomaru; S Inoguchi; T Ishihara; Y Goto; R Nishikawa; H Mataki; S Tatarano; T Itesako; M Nakagawa; H Enokida
Journal:  Br J Cancer       Date:  2015-06-09       Impact factor: 7.640

8.  Upregulated expression of BCL2, MCM7, and CCNE1 indicate cisplatin-resistance in the set of two human bladder cancer cell lines: T24 cisplatin sensitive and T24R2 cisplatin resistant bladder cancer cell lines.

Authors:  Sung Han Kim; Jin-Nyoung Ho; Hyunjin Jin; Sang Chul Lee; Sang Eun Lee; Sung-Kyu Hong; Jeong Woo Lee; Eun-Sik Lee; Seok-Soo Byun
Journal:  Investig Clin Urol       Date:  2016-01-11

9.  Cyclin E1-CDK 2, a potential anticancer target.

Authors:  Dongdong Fang; Shuang Huang; Shi-Bing Su
Journal:  Aging (Albany NY)       Date:  2016-04       Impact factor: 5.682

10.  Bioinformatic identification of prognostic signature defined by copy number alteration and expression of CCNE1 in non-muscle invasive bladder cancer.

Authors:  Bic-Na Song; Seon-Kyu Kim; In-Sun Chu
Journal:  Exp Mol Med       Date:  2017-01-13       Impact factor: 8.718

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