Literature DB >> 25309815

A Temporal Pattern Mining Approach for Classifying Electronic Health Record Data.

Iyad Batal1, Hamed Valizadegan1, Gregory F Cooper1, Milos Hauskrecht1.   

Abstract

We study the problem of learning classification models from complex multivariate temporal data encountered in electronic health record systems. The challenge is to define a good set of features that are able to represent well the temporal aspect of the data. Our method relies on temporal abstractions and temporal pattern mining to extract the classification features. Temporal pattern mining usually returns a large number of temporal patterns, most of which may be irrelevant to the classification task. To address this problem, we present the Minimal Predictive Temporal Patterns framework to generate a small set of predictive and non-spurious patterns. We apply our approach to the real-world clinical task of predicting patients who are at risk of developing heparin induced thrombocytopenia. The results demonstrate the benefit of our approach in efficiently learning accurate classifiers, which is a key step for developing intelligent clinical monitoring systems.

Entities:  

Year:  2013        PMID: 25309815      PMCID: PMC4192602          DOI: 10.1145/2508037.2508044

Source DB:  PubMed          Journal:  ACM Trans Intell Syst Technol        ISSN: 2157-6904            Impact factor:   4.654


  5 in total

Review 1.  Heparin-induced thrombocytopenia: pathogenesis and management.

Authors:  Theodore E Warkentin
Journal:  Br J Haematol       Date:  2003-05       Impact factor: 6.998

2.  Medical temporal-knowledge discovery via temporal abstraction.

Authors:  Robert Moskovitch; Yuval Shahar
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

3.  Conditional outlier detection for clinical alerting.

Authors:  Milos Hauskrecht; Michal Valko; Iyad Batal; Gilles Clermont; Shyam Visweswaran; Gregory F Cooper
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

4.  Argatroban dosing of patients with heparin-induced thrombocytopenia and an elevated aPTT due to antiphospholipid antibody syndrome.

Authors:  Robert Pendleton; Michelle M Wheeler; George M Rodgers
Journal:  Ann Pharmacother       Date:  2006-03-28       Impact factor: 3.154

5.  Feature importance analysis for patient management decisions.

Authors:  Michal Valko; Milos Hauskrecht
Journal:  Stud Health Technol Inform       Date:  2010
  5 in total
  10 in total

1.  A Regularized Linear Dynamical System Framework for Multivariate Time Series Analysis.

Authors:  Zitao Liu; Milos Hauskrecht
Journal:  Proc Conf AAAI Artif Intell       Date:  2015-01

2.  An Efficient Pattern Mining Approach for Event Detection in Multivariate Temporal Data.

Authors:  Iyad Batal; Gregory Cooper; Dmitriy Fradkin; James Harrison; Fabian Moerchen; Milos Hauskrecht
Journal:  Knowl Inf Syst       Date:  2015-01-21       Impact factor: 2.822

Review 3.  Progress in Biomedical Knowledge Discovery: A 25-year Retrospective.

Authors:  L Sacchi; J H Holmes
Journal:  Yearb Med Inform       Date:  2016-08-02

4.  A Temporal Mining Framework for Classifying Un-Evenly Spaced Clinical Data: An Approach for Building Effective Clinical Decision-Making System.

Authors:  Nancy Yesudhas Jane; Khanna Harichandran Nehemiah; Kannan Arputharaj
Journal:  Appl Clin Inform       Date:  2016-01-13       Impact factor: 2.342

5.  Utilizing uncoded consultation notes from electronic medical records for predictive modeling of colorectal cancer.

Authors:  Mark Hoogendoorn; Peter Szolovits; Leon M G Moons; Mattijs E Numans
Journal:  Artif Intell Med       Date:  2016-03-31       Impact factor: 5.326

6.  A design of experiments approach to validation sampling for logistic regression modeling with error-prone medical records.

Authors:  Liwen Ouyang; Daniel W Apley; Sanjay Mehrotra
Journal:  J Am Med Inform Assoc       Date:  2015-09-15       Impact factor: 4.497

7.  Mining compact predictive pattern sets using classification model.

Authors:  Matteo Mantovani; Carlo Combi; Milos Hauskrecht
Journal:  Artif Intell Med Conf Artif Intell Med (2005-)       Date:  2019-05-30

8.  Modeling multivariate clinical event time-series with recurrent temporal mechanisms.

Authors:  Jeong Min Lee; Milos Hauskrecht
Journal:  Artif Intell Med       Date:  2021-01-18       Impact factor: 5.326

9.  High-throughput phenotyping with temporal sequences.

Authors:  Hossein Estiri; Zachary H Strasser; Shawn N Murphy
Journal:  J Am Med Inform Assoc       Date:  2021-03-18       Impact factor: 4.497

10.  Prediction of heart failure 1 year before diagnosis in general practitioner patients using machine learning algorithms: a retrospective case-control study.

Authors:  Frank C Bennis; Mark Hoogendoorn; Claire Aussems; Joke C Korevaar
Journal:  BMJ Open       Date:  2022-08-30       Impact factor: 3.006

  10 in total

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