Literature DB >> 25309208

Crystal structure of N-(1-allyl-3-chloro-4-eth-oxy-1H-indazol-5-yl)-4-meth-oxybenzene-sulfonamide.

Hakima Chicha1, El Mostapha Rakib1, Latifa Bouissane1, Mohamed Saadi2, Lahcen El Ammari2.   

Abstract

In the title compound, C19H20ClN3O4S, the benzene ring is inclined to the indazole ring system (r.m.s. deviation = 0.014 Å) by 65.07 (8)°. The allyl and eth-oxy groups are almost normal to the indazole ring, as indicated by the respective torsion angles [N-N-C-C = 111.6 (2) and C-C-O-C = -88.1 (2)°]. In the crystal, mol-ecules are connected by N-H⋯N hydrogen bonds, forming helical chains propagating along [010]. The chains are linked by C-H⋯O hydrogen bonds, forming a three-dimensional network.

Entities:  

Keywords:  benzene­sulfonamide; crystal structure; hydrogen bonds; indazole

Year:  2014        PMID: 25309208      PMCID: PMC4186176          DOI: 10.1107/S1600536814018492

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of sulfonamides, see: El-Sayed et al. (2011 ▶); Mustafa et al. (2012 ▶); Bouissane et al. (2006 ▶); Ghorab et al. (2009 ▶). For similar compounds, see: Abbassi et al. (2012 ▶, 2013 ▶); Chicha et al. (2014 ▶).

Experimental

Crystal data

C19H20ClN3O4S M = 421.89 Monoclinic, a = 8.2699 (7) Å b = 13.1235 (12) Å c = 10.0026 (9) Å β = 110.379 (5)° V = 1017.64 (16) Å3 Z = 2 Mo Kα radiation μ = 0.32 mm−1 T = 296 K 0.42 × 0.32 × 0.28 mm

Data collection

Bruker X8 APEX Diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2008 ▶) T min = 0.670, T max = 0.746 12792 measured reflections 5605 independent reflections 4754 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.088 S = 1.03 5605 reflections 253 parameters 1 restraint H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.20 e Å−3 Absolute structure: Flack & Bernardinelli (2000 ▶) Absolute structure parameter: −0.04 (4)

Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814018492/su2771sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814018492/su2771Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814018492/su2771Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814018492/su2771fig1.tif A view of the mol­ecular structure of the title mol­ecule, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level. Click here for additional data file. . DOI: 10.1107/S1600536814018492/su2771fig2.tif A partial view of the crystal packing of the title compound. The hydrogen bonds are shown as dashed lines (see Table 1 for details). CCDC reference: 1019238 Additional supporting information: crystallographic information; 3D view; checkCIF report
C19H20ClN3O4SF(000) = 440
Mr = 421.89Dx = 1.377 Mg m3
Monoclinic, P21Melting point: 397 K
Hall symbol: P 2ybMo Kα radiation, λ = 0.71073 Å
a = 8.2699 (7) ÅCell parameters from 5605 reflections
b = 13.1235 (12) Åθ = 2.6–29.6°
c = 10.0026 (9) ŵ = 0.32 mm1
β = 110.379 (5)°T = 296 K
V = 1017.64 (16) Å3Prism, colourless
Z = 20.42 × 0.32 × 0.28 mm
Bruker X8 APEX Diffractometer5605 independent reflections
Radiation source: fine-focus sealed tube4754 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
φ and ω scansθmax = 29.6°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008)h = −11→11
Tmin = 0.670, Tmax = 0.746k = −18→18
12792 measured reflectionsl = −12→13
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.088w = 1/[σ2(Fo2) + (0.0435P)2 + 0.0481P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
5605 reflectionsΔρmax = 0.18 e Å3
253 parametersΔρmin = −0.20 e Å3
1 restraintAbsolute structure: Flack & Bernardinelli (2000)
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: −0.04 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.
xyzUiso*/Ueq
C10.5375 (4)0.8680 (4)0.9417 (3)0.1124 (13)
H1A0.61820.81590.95770.135*
H1B0.53440.90841.01730.135*
C20.4301 (3)0.8844 (2)0.8151 (3)0.0706 (7)
H20.35060.93700.80180.085*
C30.4268 (2)0.82350 (16)0.6893 (2)0.0519 (4)
H3A0.46290.86630.62570.062*
H3B0.50890.76800.72060.062*
C40.0173 (2)0.76621 (13)0.43723 (18)0.0438 (4)
C50.0066 (2)0.69652 (13)0.54239 (16)0.0396 (3)
C60.1670 (2)0.70913 (13)0.65413 (18)0.0411 (4)
C70.2124 (2)0.65003 (15)0.77993 (19)0.0472 (4)
H70.31870.65750.85260.057*
C80.0936 (2)0.58180 (14)0.78968 (19)0.0455 (4)
H80.12000.54200.87140.055*
C9−0.0697 (2)0.56870 (13)0.68005 (17)0.0387 (3)
C10−0.1141 (2)0.62525 (13)0.55548 (17)0.0389 (3)
C11−0.4058 (3)0.67175 (17)0.4348 (2)0.0595 (5)
H11A−0.36800.74220.44670.071*
H11B−0.44980.65480.51020.071*
C12−0.5450 (3)0.6575 (2)0.2914 (3)0.0826 (8)
H12A−0.64100.70090.28460.124*
H12B−0.58210.58770.28070.124*
H12C−0.50060.67480.21760.124*
C13−0.1432 (2)0.47263 (13)0.97527 (17)0.0372 (3)
C14−0.0709 (2)0.37584 (14)1.00480 (19)0.0445 (4)
H14−0.09980.32610.93420.053*
C150.0440 (2)0.35386 (14)1.1395 (2)0.0472 (4)
H150.09360.28951.15940.057*
C160.0854 (2)0.42823 (14)1.24556 (18)0.0412 (4)
C170.0108 (3)0.52403 (15)1.21696 (19)0.0509 (5)
H170.03650.57321.28820.061*
C18−0.1031 (2)0.54584 (15)1.08055 (19)0.0472 (4)
H18−0.15250.61031.06030.057*
C190.2358 (3)0.4703 (2)1.4897 (2)0.0654 (6)
H19A0.31880.44141.57390.098*
H19B0.13100.48451.50710.098*
H19C0.28080.53231.46560.098*
N10.25612 (19)0.78146 (13)0.61078 (16)0.0475 (3)
H1N−0.19660.43990.64540.057*
N20.1641 (2)0.81619 (12)0.47747 (17)0.0487 (4)
N3−0.18652 (19)0.49314 (12)0.69400 (14)0.0450 (3)
O1−0.26451 (16)0.60654 (10)0.44257 (13)0.0492 (3)
O2−0.3468 (2)0.60356 (12)0.80661 (15)0.0631 (4)
O3−0.41372 (18)0.41918 (13)0.76263 (15)0.0663 (4)
O40.20127 (17)0.39973 (12)1.37445 (14)0.0575 (4)
S1−0.29029 (5)0.50045 (3)0.80328 (4)0.04255 (11)
Cl1−0.13391 (7)0.78969 (4)0.27168 (5)0.06011 (14)
U11U22U33U12U13U23
C10.0692 (16)0.197 (4)0.0710 (18)−0.008 (2)0.0241 (14)−0.035 (2)
C20.0470 (11)0.0776 (16)0.0869 (16)−0.0028 (11)0.0230 (11)−0.0236 (13)
C30.0415 (9)0.0562 (11)0.0615 (11)−0.0034 (8)0.0223 (8)0.0045 (9)
C40.0545 (10)0.0401 (10)0.0375 (8)0.0026 (8)0.0168 (7)0.0043 (7)
C50.0474 (9)0.0380 (8)0.0345 (7)0.0047 (7)0.0155 (6)0.0034 (6)
C60.0436 (8)0.0399 (9)0.0415 (8)0.0019 (7)0.0169 (7)0.0041 (7)
C70.0441 (9)0.0529 (11)0.0404 (8)0.0016 (8)0.0096 (7)0.0075 (7)
C80.0517 (10)0.0480 (10)0.0367 (8)0.0037 (8)0.0154 (7)0.0096 (7)
C90.0471 (9)0.0340 (8)0.0377 (8)−0.0011 (7)0.0184 (7)−0.0012 (6)
C100.0460 (8)0.0355 (8)0.0343 (7)0.0020 (7)0.0129 (6)−0.0020 (6)
C110.0527 (10)0.0579 (12)0.0599 (11)0.0003 (10)0.0097 (9)−0.0046 (10)
C120.0651 (14)0.0873 (19)0.0745 (15)−0.0002 (13)−0.0023 (12)0.0097 (14)
C130.0374 (7)0.0407 (9)0.0341 (7)0.0006 (6)0.0129 (6)0.0056 (6)
C140.0526 (9)0.0398 (9)0.0398 (8)0.0039 (8)0.0145 (7)−0.0014 (7)
C150.0530 (10)0.0396 (9)0.0487 (9)0.0108 (8)0.0171 (8)0.0061 (7)
C160.0353 (7)0.0475 (10)0.0390 (8)0.0030 (7)0.0108 (6)0.0053 (7)
C170.0548 (10)0.0466 (11)0.0424 (9)0.0043 (8)0.0057 (7)−0.0067 (7)
C180.0532 (10)0.0382 (9)0.0447 (9)0.0072 (7)0.0100 (8)0.0024 (7)
C190.0630 (12)0.0784 (16)0.0416 (10)−0.0014 (11)0.0013 (8)0.0019 (10)
N10.0483 (7)0.0480 (8)0.0464 (8)−0.0015 (7)0.0169 (6)0.0078 (7)
N20.0601 (9)0.0433 (8)0.0465 (8)0.0024 (7)0.0234 (7)0.0091 (6)
N30.0608 (8)0.0372 (7)0.0419 (7)−0.0087 (7)0.0241 (6)−0.0053 (6)
O10.0551 (7)0.0475 (7)0.0390 (6)−0.0016 (6)0.0089 (5)−0.0066 (5)
O20.0731 (9)0.0687 (10)0.0497 (8)0.0340 (8)0.0242 (7)0.0146 (7)
O30.0477 (7)0.0917 (12)0.0499 (8)−0.0213 (8)0.0049 (6)0.0132 (8)
O40.0520 (7)0.0689 (9)0.0419 (6)0.0142 (7)0.0041 (5)0.0047 (6)
S10.03950 (19)0.0505 (2)0.03584 (18)0.00353 (19)0.01090 (14)0.00789 (17)
Cl10.0752 (3)0.0580 (3)0.0390 (2)−0.0010 (2)0.0097 (2)0.0121 (2)
C1—C21.287 (4)C11—H11B0.9700
C1—H1A0.9300C12—H12A0.9600
C1—H1B0.9300C12—H12B0.9600
C2—C31.483 (3)C12—H12C0.9600
C2—H20.9300C13—C181.378 (3)
C3—N11.463 (2)C13—C141.391 (2)
C3—H3A0.9700C13—S11.7650 (16)
C3—H3B0.9700C14—C151.382 (2)
C4—N21.313 (2)C14—H140.9300
C4—C51.420 (2)C15—C161.393 (3)
C4—Cl11.7201 (17)C15—H150.9300
C5—C101.407 (2)C16—O41.3636 (19)
C5—C61.416 (2)C16—C171.386 (3)
C6—N11.362 (2)C17—C181.391 (2)
C6—C71.413 (2)C17—H170.9300
C7—C81.358 (3)C18—H180.9300
C7—H70.9300C19—O41.428 (3)
C8—C91.423 (2)C19—H19A0.9600
C8—H80.9300C19—H19B0.9600
C9—C101.385 (2)C19—H19C0.9600
C9—N31.425 (2)N1—N21.363 (2)
C10—O11.3801 (19)N3—S11.6106 (14)
C11—O11.428 (2)N3—H1N0.8390
C11—C121.506 (3)O2—S11.4358 (15)
C11—H11A0.9700O3—S11.4338 (15)
C2—C1—H1A120.0C11—C12—H12C109.5
C2—C1—H1B120.0H12A—C12—H12C109.5
H1A—C1—H1B120.0H12B—C12—H12C109.5
C1—C2—C3123.2 (3)C18—C13—C14120.21 (15)
C1—C2—H2118.4C18—C13—S1120.10 (13)
C3—C2—H2118.4C14—C13—S1119.68 (13)
N1—C3—C2112.82 (16)C15—C14—C13119.75 (16)
N1—C3—H3A109.0C15—C14—H14120.1
C2—C3—H3A109.0C13—C14—H14120.1
N1—C3—H3B109.0C14—C15—C16119.95 (16)
C2—C3—H3B109.0C14—C15—H15120.0
H3A—C3—H3B107.8C16—C15—H15120.0
N2—C4—C5112.59 (15)O4—C16—C17124.04 (16)
N2—C4—Cl1119.34 (13)O4—C16—C15115.67 (16)
C5—C4—Cl1128.07 (14)C17—C16—C15120.29 (15)
C10—C5—C6120.30 (15)C16—C17—C18119.33 (17)
C10—C5—C4136.61 (15)C16—C17—H17120.3
C6—C5—C4103.08 (15)C18—C17—H17120.3
N1—C6—C7131.36 (16)C13—C18—C17120.43 (17)
N1—C6—C5107.00 (15)C13—C18—H18119.8
C7—C6—C5121.61 (16)C17—C18—H18119.8
C8—C7—C6116.83 (15)O4—C19—H19A109.5
C8—C7—H7121.6O4—C19—H19B109.5
C6—C7—H7121.6H19A—C19—H19B109.5
C7—C8—C9122.74 (16)O4—C19—H19C109.5
C7—C8—H8118.6H19A—C19—H19C109.5
C9—C8—H8118.6H19B—C19—H19C109.5
C10—C9—C8120.76 (16)C6—N1—N2111.39 (14)
C10—C9—N3119.00 (15)C6—N1—C3128.29 (16)
C8—C9—N3120.16 (14)N2—N1—C3120.30 (16)
O1—C10—C9121.44 (16)C4—N2—N1105.93 (14)
O1—C10—C5120.56 (15)C9—N3—S1124.38 (12)
C9—C10—C5117.75 (15)C9—N3—H1N117.2
O1—C11—C12108.46 (19)S1—N3—H1N118.3
O1—C11—H11A110.0C10—O1—C11115.14 (13)
C12—C11—H11A110.0C16—O4—C19117.56 (16)
O1—C11—H11B110.0O3—S1—O2120.14 (10)
C12—C11—H11B110.0O3—S1—N3104.96 (9)
H11A—C11—H11B108.4O2—S1—N3109.07 (8)
C11—C12—H12A109.5O3—S1—C13107.67 (8)
C11—C12—H12B109.5O2—S1—C13106.96 (8)
H12A—C12—H12B109.5N3—S1—C13107.45 (8)
D—H···AD—HH···AD···AD—H···A
N3—H1N···N2i0.842.112.931 (2)166
C19—H19A···O3ii0.962.373.285 (2)159
C3—H3B···O2iii0.972.473.418 (3)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H1N⋯N2i 0.842.112.931 (2)166
C19—H19A⋯O3ii 0.962.373.285 (2)159
C3—H3B⋯O2iii 0.972.473.418 (3)165

Symmetry codes: (i) ; (ii) ; (iii) .

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