Literature DB >> 25294983

The lipid cubic phase or in meso method for crystallizing proteins. Bushings for better manual dispensing.

Martin Caffrey1, Robert Eifert2, Dianfan Li1, Nicole Howe1.   

Abstract

The lipid cubic phase or in meso method can be used to set up crystallization trials of soluble and membrane proteins. The cubic phase is noted for being a sticky and viscous mesophase. Dispensing the protein-laden mesophase by hand into wells on crystallization plates has been facilitated by the use of an inexpensive repeat dispenser. However, the assembled dispensing device is prone to damage. Specifically, the delicate plunger used to dispense the viscous mesophase by positive displacement can be bent and scarred when the locking nut that fixes the plunger to the ratchet-driven dispensing mechanism is inadvertently overtightened. A defective plunger can render the device useless as a dispensing tool. More importantly, it can lead to catastrophic loss of valuable protein and lipid due to leakage when the dispensing syringe is being recharged with fresh mesophase. This note describes two types of bushings designed to protect the plunger from mechanical damage, which provide facile and reliable dispenser performance. One is a split bushing in brass and is a highly durable solution. The other is a small sleeve made from readily available plastic tubing. While it lacks durability, the plastic sleeve is simple yet highly effective, and can be replaced as the need arises.

Entities:  

Keywords:  dispensing devices; in meso crystallization; lipid cubic phase; membrane protein crystallization

Year:  2014        PMID: 25294983      PMCID: PMC4180742          DOI: 10.1107/S1600576714015702

Source DB:  PubMed          Journal:  J Appl Crystallogr        ISSN: 0021-8898            Impact factor:   3.304


  12 in total

Review 1.  A lipid's eye view of membrane protein crystallization in mesophases.

Authors:  M Caffrey
Journal:  Curr Opin Struct Biol       Date:  2000-08       Impact factor: 6.809

2.  Announcing the worldwide Protein Data Bank.

Authors:  Helen Berman; Kim Henrick; Haruki Nakamura
Journal:  Nat Struct Biol       Date:  2003-12

3.  Crystallization of a globular protein in lipid cubic phase.

Authors:  S Tanaka; S U Egelhaaf; W C K Poon
Journal:  Phys Rev Lett       Date:  2004-03-26       Impact factor: 9.161

Review 4.  Structure-function of the G protein-coupled receptor superfamily.

Authors:  Vsevolod Katritch; Vadim Cherezov; Raymond C Stevens
Journal:  Annu Rev Pharmacol Toxicol       Date:  2012-11-08       Impact factor: 13.820

5.  G-protein-coupled receptors signal victory.

Authors:  Jeffrey L Benovic
Journal:  Cell       Date:  2012-11-29       Impact factor: 41.582

6.  Membrane protein structure determination using crystallography and lipidic mesophases: recent advances and successes.

Authors:  Martin Caffrey; Dianfan Li; Abhiram Dukkipati
Journal:  Biochemistry       Date:  2012-07-31       Impact factor: 3.162

7.  Crystallizing membrane proteins using lipidic mesophases.

Authors:  Martin Caffrey; Vadim Cherezov
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

8.  Use of a robot for high-throughput crystallization of membrane proteins in lipidic mesophases.

Authors:  Dianfan Li; Coilín Boland; Kilian Walsh; Martin Caffrey
Journal:  J Vis Exp       Date:  2012-09-01       Impact factor: 1.355

9.  A fast, simple and robust protocol for growing crystals in the lipidic cubic phase.

Authors:  Margaret Aherne; Joseph A Lyons; Martin Caffrey
Journal:  J Appl Crystallogr       Date:  2012-10-10       Impact factor: 3.304

10.  Crystal structure of the β2 adrenergic receptor-Gs protein complex.

Authors:  Søren G F Rasmussen; Brian T DeVree; Yaozhong Zou; Andrew C Kruse; Ka Young Chung; Tong Sun Kobilka; Foon Sun Thian; Pil Seok Chae; Els Pardon; Diane Calinski; Jesper M Mathiesen; Syed T A Shah; Joseph A Lyons; Martin Caffrey; Samuel H Gellman; Jan Steyaert; Georgios Skiniotis; William I Weis; Roger K Sunahara; Brian K Kobilka
Journal:  Nature       Date:  2011-07-19       Impact factor: 49.962

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  1 in total

Review 1.  A comprehensive review of the lipid cubic phase or in meso method for crystallizing membrane and soluble proteins and complexes.

Authors:  Martin Caffrey
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-01-01       Impact factor: 1.056

  1 in total

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