Literature DB >> 25284968

Wavelet based multi-scale shape features on arbitrary surfaces for cortical thickness discrimination.

Won Hwa Kim1, Deepti Pachauri2, Charles Hatt3, Moo K Chung4, Sterling C Johnson5, Vikas Singh6.   

Abstract

Hypothesis testing on signals defined on surfaces (such as the cortical surface) is a fundamental component of a variety of studies in Neuroscience. The goal here is to identify regions that exhibit changes as a function of the clinical condition under study. As the clinical questions of interest move towards identifying very early signs of diseases, the corresponding statistical differences at the group level invariably become weaker and increasingly hard to identify. Indeed, after a multiple comparisons correction is adopted (to account for correlated statistical tests over all surface points), very few regions may survive. In contrast to hypothesis tests on point-wise measurements, in this paper, we make the case for performing statistical analysis on multi-scale shape descriptors that characterize the local topological context of the signal around each surface vertex. Our descriptors are based on recent results from harmonic analysis, that show how wavelet theory extends to non-Euclidean settings (i.e., irregular weighted graphs). We provide strong evidence that these descriptors successfully pick up group-wise differences, where traditional methods either fail or yield unsatisfactory results. Other than this primary application, we show how the framework allows performing cortical surface smoothing in the native space without mappint to a unit sphere.

Entities:  

Year:  2012        PMID: 25284968      PMCID: PMC4182864     

Source DB:  PubMed          Journal:  Adv Neural Inf Process Syst        ISSN: 1049-5258


  14 in total

1.  Deformation-based surface morphometry applied to gray matter deformation.

Authors:  Moo K Chung; Keith J Worsley; Steve Robbins; Tomás Paus; Jonathan Taylor; Jay N Giedd; Judith L Rapoport; Alan C Evans
Journal:  Neuroimage       Date:  2003-02       Impact factor: 6.556

2.  Toward defining the preclinical stages of Alzheimer's disease: recommendations from the National Institute on Aging-Alzheimer's Association workgroups on diagnostic guidelines for Alzheimer's disease.

Authors:  Reisa A Sperling; Paul S Aisen; Laurel A Beckett; David A Bennett; Suzanne Craft; Anne M Fagan; Takeshi Iwatsubo; Clifford R Jack; Jeffrey Kaye; Thomas J Montine; Denise C Park; Eric M Reiman; Christopher C Rowe; Eric Siemers; Yaakov Stern; Kristine Yaffe; Maria C Carrillo; Bill Thies; Marcelle Morrison-Bogorad; Molly V Wagster; Creighton H Phelps
Journal:  Alzheimers Dement       Date:  2011-04-21       Impact factor: 21.566

3.  Longitudinal mapping of cortical thickness and brain growth in normal children.

Authors:  Elizabeth R Sowell; Paul M Thompson; Christiana M Leonard; Suzanne E Welcome; Eric Kan; Arthur W Toga
Journal:  J Neurosci       Date:  2004-09-22       Impact factor: 6.167

4.  Cortical surface shape analysis based on spherical wavelets.

Authors:  Peng Yu; P Ellen Grant; Yuan Qi; Xiao Han; Florent Ségonne; Rudolph Pienaar; Evelina Busa; Jenni Pacheco; Nikos Makris; Randy L Buckner; Polina Golland; Bruce Fischl
Journal:  IEEE Trans Med Imaging       Date:  2007-04       Impact factor: 10.048

5.  Intellectual ability and cortical development in children and adolescents.

Authors:  P Shaw; D Greenstein; J Lerch; L Clasen; R Lenroot; N Gogtay; A Evans; J Rapoport; J Giedd
Journal:  Nature       Date:  2006-03-30       Impact factor: 49.962

6.  Highly accurate inverse consistent registration: a robust approach.

Authors:  Martin Reuter; H Diana Rosas; Bruce Fischl
Journal:  Neuroimage       Date:  2010-07-14       Impact factor: 6.556

7.  Synapse loss in frontal cortex biopsies in Alzheimer's disease: correlation with cognitive severity.

Authors:  S T DeKosky; S W Scheff
Journal:  Ann Neurol       Date:  1990-05       Impact factor: 10.422

8.  Postmortem evidence of structural brain changes in schizophrenia. Differences in brain weight, temporal horn area, and parahippocampal gyrus compared with affective disorder.

Authors:  R Brown; N Colter; J A Corsellis; T J Crow; C D Frith; R Jagoe; E C Johnstone; L Marsh
Journal:  Arch Gen Psychiatry       Date:  1986-01

9.  Preclinical evidence of Alzheimer's disease in persons homozygous for the epsilon 4 allele for apolipoprotein E.

Authors:  E M Reiman; R J Caselli; L S Yun; K Chen; D Bandy; S Minoshima; S N Thibodeau; D Osborne
Journal:  N Engl J Med       Date:  1996-03-21       Impact factor: 91.245

10.  Diffuse changes in cortical thickness in pediatric moderate-to-severe traumatic brain injury.

Authors:  Tricia L Merkley; Erin D Bigler; Elisabeth A Wilde; Stephen R McCauley; Jill V Hunter; Harvey S Levin
Journal:  J Neurotrauma       Date:  2008-11       Impact factor: 5.269

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  21 in total

1.  Applying tensor-based morphometry to parametric surfaces can improve MRI-based disease diagnosis.

Authors:  Yalin Wang; Lei Yuan; Jie Shi; Alexander Greve; Jieping Ye; Arthur W Toga; Allan L Reiss; Paul M Thompson
Journal:  Neuroimage       Date:  2013-02-20       Impact factor: 6.556

2.  Multi-resolutional brain network filtering and analysis via wavelets on non-Euclidean space.

Authors:  Won Hwa Kim; Nagesh Adluru; Moo K Chung; Sylvia Charchut; Johnson J GadElkarim; Lori Altshuler; Teena Moody; Anand Kumar; Vikas Singh; Alex D Leow
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

3.  Genetic influence of apolipoprotein E4 genotype on hippocampal morphometry: An N = 725 surface-based Alzheimer's disease neuroimaging initiative study.

Authors:  Jie Shi; Natasha Leporé; Boris A Gutman; Paul M Thompson; Leslie C Baxter; Richard J Caselli; Yalin Wang
Journal:  Hum Brain Mapp       Date:  2014-01-22       Impact factor: 5.038

4.  Persistent Homology in Sparse Regression and Its Application to Brain Morphometry.

Authors:  Moo K Chung; Jamie L Hanson; Jieping Ye; Richard J Davidson; Seth D Pollak
Journal:  IEEE Trans Med Imaging       Date:  2015-03-24       Impact factor: 10.048

5.  Statistical Inference Models for Image Datasets with Systematic Variations.

Authors:  Won Hwa Kim; Barbara B Bendlin; Moo K Chung; Sterling C Johnson; Vikas Singh
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2015-06

6.  Multi-resolutional shape features via non-Euclidean wavelets: applications to statistical analysis of cortical thickness.

Authors:  Won Hwa Kim; Vikas Singh; Moo K Chung; Chris Hinrichs; Deepti Pachauri; Ozioma C Okonkwo; Sterling C Johnson
Journal:  Neuroimage       Date:  2014-03-12       Impact factor: 6.556

7.  Multi-resolution Shape Analysis via Non-Euclidean Wavelets: Applications to Mesh Segmentation and Surface Alignment Problems.

Authors:  Won Hwa Kim; Moo K Chung; Vikas Singh
Journal:  Conf Comput Vis Pattern Recognit Workshops       Date:  2013

8.  Multi-resolution statistical analysis of brain connectivity graphs in preclinical Alzheimer's disease.

Authors:  Won Hwa Kim; Nagesh Adluru; Moo K Chung; Ozioma C Okonkwo; Sterling C Johnson; Barbara B Bendlin; Vikas Singh
Journal:  Neuroimage       Date:  2015-05-27       Impact factor: 6.556

9.  A unified kernel regression for diffusion wavelets on manifolds detects aging-related changes in the amygdala and hippocampus.

Authors:  Moo K Chung; Stacey M Schaefer; Carien M Van Reekum; Lara Peschke-Schmitz; Mattew J Sutterer; Richard J Davidson
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

10.  Surface fluid registration of conformal representation: application to detect disease burden and genetic influence on hippocampus.

Authors:  Jie Shi; Paul M Thompson; Boris Gutman; Yalin Wang
Journal:  Neuroimage       Date:  2013-04-13       Impact factor: 6.556

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