Literature DB >> 17427744

Cortical surface shape analysis based on spherical wavelets.

Peng Yu1, P Ellen Grant, Yuan Qi, Xiao Han, Florent Ségonne, Rudolph Pienaar, Evelina Busa, Jenni Pacheco, Nikos Makris, Randy L Buckner, Polina Golland, Bruce Fischl.   

Abstract

In vivo quantification of neuroanatomical shape variations is possible due to recent advances in medical imaging and has proven useful in the study of neuropathology and neurodevelopment. In this paper, we apply a spherical wavelet transformation to extract shape features of cortical surfaces reconstructed from magnetic resonance images (MRIs) of a set of subjects. The spherical wavelet transformation can characterize the underlying functions in a local fashion in both space and frequency, in contrast to spherical harmonics that have a global basis set. We perform principal component analysis (PCA) on these wavelet shape features to study patterns of shape variation within normal population from coarse to fine resolution. In addition, we study the development of cortical folding in newborns using the Gompertz model in the wavelet domain, which allows us to characterize the order of development of large-scale and finer folding patterns independently. Given a limited amount of training data, we use a regularization framework to estimate the parameters of the Gompertz model to improve the prediction performance on new data. We develop an efficient method to estimate this regularized Gompertz model based on the Broyden-Fletcher-Goldfarb-Shannon (BFGS) approximation. Promising results are presented using both PCA and the folding development model in the wavelet domain. The cortical folding development model provides quantitative anatomic information regarding macroscopic cortical folding development and may be of potential use as a biomarker for early diagnosis of neurologic deficits in newborns.

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Year:  2007        PMID: 17427744      PMCID: PMC4465968          DOI: 10.1109/TMI.2007.892499

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  9 in total

1.  Elastic model-based segmentation of 3-D neuroradiological data sets.

Authors:  A Kelemen; G Székely; G Gerig
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

2.  Segmentation, registration, and measurement of shape variation via image object shape.

Authors:  S M Pizer; D S Fritsch; P A Yushkevich; V E Johnson; E L Chaney
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

3.  3D brain mapping using a deformable neuroanatomy.

Authors:  G E Christensen; R D Rabbitt; M I Miller
Journal:  Phys Med Biol       Date:  1994-03       Impact factor: 3.609

4.  Statistical shape analysis of neuroanatomical structures based on medial models.

Authors:  M Styner; G Gerig; J Lieberman; D Jones; D Weinberger
Journal:  Med Image Anal       Date:  2003-09       Impact factor: 8.545

5.  Segmentation of 2-D and 3-D objects from MRI volume data using constrained elastic deformations of flexible Fourier contour and surface models.

Authors:  G Székely; A Kelemen; C Brechbühler; G Gerig
Journal:  Med Image Anal       Date:  1996-03       Impact factor: 8.545

6.  Cortical surface-based analysis. I. Segmentation and surface reconstruction.

Authors:  A M Dale; B Fischl; M I Sereno
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

7.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

8.  A computerized approach for morphological analysis of the corpus callosum.

Authors:  C Davatzikos; M Vaillant; S M Resnick; J L Prince; S Letovsky; R N Bryan
Journal:  J Comput Assist Tomogr       Date:  1996 Jan-Feb       Impact factor: 1.826

9.  Growth patterns in the developing brain detected by using continuum mechanical tensor maps.

Authors:  P M Thompson; J N Giedd; R P Woods; D MacDonald; A C Evans; A W Toga
Journal:  Nature       Date:  2000-03-09       Impact factor: 49.962

  9 in total
  31 in total

1.  Principal component based diffeomorphic surface mapping.

Authors:  Anqi Qiu; Laurent Younes; Michael I Miller
Journal:  IEEE Trans Med Imaging       Date:  2011-09-19       Impact factor: 10.048

2.  Shape Comparison Using Perturbing Shape Registration.

Authors:  Yifeng Jiang; Erin Edmiston; Fei Wang; Hilary P Blumberg; Lawrence H Staib; Xenophon Papademetris
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2009-06-20

3.  On the construction of invertible filter banks on the 2-sphere.

Authors:  Boon Thye Thomas Yeo; Wanmei Ou; Polina Golland
Journal:  IEEE Trans Image Process       Date:  2008-03       Impact factor: 10.856

4.  Time sequence diffeomorphic metric mapping and parallel transport track time-dependent shape changes.

Authors:  Anqi Qiu; Marilyn Albert; Laurent Younes; Michael I Miller
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

5.  Effects of registration regularization and atlas sharpness on segmentation accuracy.

Authors:  B T Thomas Yeo; Mert R Sabuncu; Rahul Desikan; Bruce Fischl; Polina Golland
Journal:  Med Image Anal       Date:  2008-06-19       Impact factor: 8.545

6.  Shape analysis with overcomplete spherical wavelets.

Authors:  B T Thomas Yeo; Peng Yu; P Ellen Grant; Bruce Fischl; Polina Golland
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

7.  Analysis of cortical shape in children with simplex autism.

Authors:  Donna L Dierker; Eric Feczko; John R Pruett; Steven E Petersen; Bradley L Schlaggar; John N Constantino; John W Harwell; Timothy S Coalson; David C Van Essen
Journal:  Cereb Cortex       Date:  2013-10-27       Impact factor: 5.357

8.  Gyral folding pattern analysis via surface profiling.

Authors:  Kaiming Li; Lei Guo; Gang Li; Jingxin Nie; Carlos Faraco; Guangbin Cui; Qun Zhao; L Stephen Miller; Tianming Liu
Journal:  Neuroimage       Date:  2010-05-26       Impact factor: 6.556

9.  Cortical Folding Development Study based on Over-Complete Spherical Wavelets.

Authors:  Peng Yu; Boon Thye Thomas Yeo; P Ellen Grant; Bruce Fischl; Polina Golland
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2007-10

10.  Kernel Methods for Riemannian Analysis of Robust Descriptors of the Cerebral Cortex.

Authors:  Suyash P Awate; Richard M Leahy; Anand A Joshi
Journal:  Inf Process Med Imaging       Date:  2017-05-23
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