Literature DB >> 25281329

Thermodynamics of Membrane Insertion and Refolding of the Diphtheria Toxin T-Domain.

Mauricio Vargas-Uribe1, Mykola V Rodnin, Karin Öjemalm, Aurora Holgado, Alexander Kyrychenko, IngMarie Nilsson, Yevgen O Posokhov, George Makhatadze, Gunnar von Heijne, Alexey S Ladokhin.   

Abstract

The diphtheria toxin translocation (T) domain inserts into the endosomal membrane in response to the endosomal acidification and enables the delivery of the catalytic domain into the cell. The insertion pathway consists of a series of conformational changes that occur in solution and in the membrane and leads to the conversion of a water-soluble state into a transmembrane state. In this work, we utilize various biophysical techniques to characterize the insertion pathway from the thermodynamic perspective. Thermal and chemical unfolding measured by differential scanning calorimetry, circular dichroism, and tryptophan fluorescence reveal that the free energy of unfolding of the T-domain at neutral and mildly acidic pH differ by 3-5 kcal/mol, depending on the experimental conditions. Fluorescence correlation spectroscopy measurements show that the free energy change from the membrane-competent state to the interfacial state is approximately -8 kcal/mol and is pH-independent, while that from the membrane-competent state to the transmembrane state ranges between -9.5 and -12 kcal/mol, depending on the membrane lipid composition and pH. Finally, the thermodynamics of transmembrane insertion of individual helices was tested using an in vitro assay that measures the translocon-assisted integration of test sequences into the microsomal membrane. These experiments suggest that even the most hydrophobic helix TH8 has only a small favorable free energy of insertion. The free energy for the insertion of the consensus insertion unit TH8-TH9 is slightly more favorable, yet less favorable than that measured for the entire protein, suggesting a cooperative effect for the membrane insertion of the helices of the T-domain.

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Year:  2014        PMID: 25281329      PMCID: PMC4385515          DOI: 10.1007/s00232-014-9734-0

Source DB:  PubMed          Journal:  J Membr Biol        ISSN: 0022-2631            Impact factor:   1.843


  36 in total

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2.  Topography of helices 5-7 in membrane-inserted diphtheria toxin T domain: identification and insertion boundaries of two hydrophobic sequences that do not form a stable transmembrane hairpin.

Authors:  Michael P Rosconi; Erwin London
Journal:  J Biol Chem       Date:  2002-02-21       Impact factor: 5.157

3.  Reversible refolding of the diphtheria toxin T-domain on lipid membranes.

Authors:  Alexey S Ladokhin; Rachel Legmann; R John Collier; Stephen H White
Journal:  Biochemistry       Date:  2004-06-15       Impact factor: 3.162

4.  Analyzing topography of membrane-inserted diphtheria toxin T domain using BODIPY-streptavidin: at low pH, helices 8 and 9 form a transmembrane hairpin but helices 5-7 form stable nonclassical inserted segments on the cis side of the bilayer.

Authors:  Michael P Rosconi; Gang Zhao; Erwin London
Journal:  Biochemistry       Date:  2004-07-20       Impact factor: 3.162

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Journal:  Biophys J       Date:  1994-02       Impact factor: 4.033

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Journal:  Protein Sci       Date:  1994-09       Impact factor: 6.725

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Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

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Authors:  H Zhan; K J Oh; Y K Shin; W L Hubbell; R J Collier
Journal:  Biochemistry       Date:  1995-04-11       Impact factor: 3.162

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  9 in total

1.  An inducible amphipathic helix within the intrinsically disordered C terminus can participate in membrane curvature generation by peripherin-2/rds.

Authors:  Michelle L Milstein; Victoria A Kimler; Chiranjib Ghatak; Alexey S Ladokhin; Andrew F X Goldberg
Journal:  J Biol Chem       Date:  2017-03-21       Impact factor: 5.157

2.  Membrane Protein Folding & Lipid Interactions: Theory & Experiment.

Authors:  Alexey S Ladokhin
Journal:  J Membr Biol       Date:  2015-06       Impact factor: 1.843

3.  Membrane Association of the Diphtheria Toxin Translocation Domain Studied by Coarse-Grained Simulations and Experiment.

Authors:  Jose C Flores-Canales; Mauricio Vargas-Uribe; Alexey S Ladokhin; Maria Kurnikova
Journal:  J Membr Biol       Date:  2015-02-04       Impact factor: 1.843

4.  Conformational switching, refolding and membrane insertion of the diphtheria toxin translocation domain.

Authors:  Alexey S Ladokhin; Alexander Kyrychenko; Mykola V Rodnin; Victor Vasquez-Montes
Journal:  Methods Enzymol       Date:  2021-02-02       Impact factor: 1.600

5.  Role of acidic residues in helices TH8-TH9 in membrane interactions of the diphtheria toxin T domain.

Authors:  Chiranjib Ghatak; Mykola V Rodnin; Mauricio Vargas-Uribe; Andrew J McCluskey; Jose C Flores-Canales; Maria Kurnikova; Alexey S Ladokhin
Journal:  Toxins (Basel)       Date:  2015-04-14       Impact factor: 4.546

6.  Cellular Entry of the Diphtheria Toxin Does Not Require the Formation of the Open-Channel State by Its Translocation Domain.

Authors:  Alexey S Ladokhin; Mauricio Vargas-Uribe; Mykola V Rodnin; Chiranjib Ghatak; Onkar Sharma
Journal:  Toxins (Basel)       Date:  2017-09-22       Impact factor: 4.546

7.  Microcalorimetric Investigations of Reversible Staphylococcal Enterotoxin Unfolding.

Authors:  Susan C Berry; Odbert A Triplett; Li-Rong Yu; Mark E Hart; Lauren S Jackson; William H Tolleson
Journal:  Toxins (Basel)       Date:  2022-08-15       Impact factor: 5.075

8.  Expanding MPEx Hydropathy Analysis to Account for Electrostatic Contributions to Protein Interactions with Anionic Membranes.

Authors:  Victor Vasquez-Montes; Alexey S Ladokhin
Journal:  J Membr Biol       Date:  2021-02-10       Impact factor: 1.843

Review 9.  Targeting Acidic Diseased Tissues by pH-Triggered Membrane-Associated Peptide Folding.

Authors:  Yana K Reshetnyak; Anna Moshnikova; Oleg A Andreev; Donald M Engelman
Journal:  Front Bioeng Biotechnol       Date:  2020-04-28
  9 in total

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