Literature DB >> 2081262

Partial molar volumes of polypeptides and their constituent groups in aqueous solution over a broad temperature range.

G I Makhatadze1, V N Medvedkin, P L Privalov.   

Abstract

The partial molar volumes of various compounds that model protein constituent groups, such as tripeptides (Gly-X-Gly, where X = Gly, Ala, Val, Leu, Ile, Pro, Met, His, Ser), homopeptides (Glyn, n = 3,4,5), and simple organic analogues of amino acid side chains (methanol, acetamide, propanamide, acetic acid, propanoic acid, n-butanamine, n-butanamine nitrate, n-propylguanidine nitrate, 4-methylphenol), have been determined in aqueous solution with a vibrational densimeter in the temperature range of 5-85 degrees C. The partial molar volumes of amino acid side chains and the peptide unit were estimated from the data obtained. Assuming additivity of component groups, the partial molar volumes of polypeptide chains of several proteins over a broad temperature range were calculated. The partial molar volume functions of four proteins (myoglobin, cytochrome C, ribonuclease A, lysozyme) were compared with those determined experimentally for the unfolded and native forms of these proteins. It has been shown that the average deviation of the calculated functions from the experimental ones does not exceed 3% over the temperature range studied.

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Year:  1990        PMID: 2081262     DOI: 10.1002/bip.360301102

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  21 in total

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2.  Folding units in calcium vector protein of amphioxus: Structural and functional properties of its amino- and carboxy-terminal halves.

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Journal:  Protein Sci       Date:  2001-04       Impact factor: 6.725

3.  Contribution of proton linkage to the thermodynamic stability of the major cold-shock protein of Escherichia coli CspA.

Authors:  S A Petrosian; G I Makhatadze
Journal:  Protein Sci       Date:  2000-02       Impact factor: 6.725

4.  Multidomain structure of a recombinant streptokinase. A differential scanning calorimetry study.

Authors:  A Beldarraín; J L López-Lacomba; V P Kutyshenko; R Serrano; M Cortijo
Journal:  J Protein Chem       Date:  2001-01

5.  Thermal and urea-induced unfolding in T7 RNA polymerase: calorimetry, circular dichroism and fluorescence study.

Authors:  Y Griko; N Sreerama; P Osumi-Davis; R W Woody; A Y Woody
Journal:  Protein Sci       Date:  2001-04       Impact factor: 6.725

6.  Interaction of cAMP receptor protein from Escherichia coli with cAMP and DNA studied by differential scanning calorimetry.

Authors:  Urszula Błaszczyk; Zygmunt Wasylewski
Journal:  J Protein Chem       Date:  2003-04

7.  Computational design of the Fyn SH3 domain with increased stability through optimization of surface charge charge interactions.

Authors:  Katrina L Schweiker; Arash Zarrine-Afsar; Alan R Davidson; George I Makhatadze
Journal:  Protein Sci       Date:  2007-12       Impact factor: 6.725

8.  An endoglucanase, EglA, from the hyperthermophilic archaeon Pyrococcus furiosus hydrolyzes beta-1,4 bonds in mixed-linkage (1-->3),(1-->4)-beta-D-glucans and cellulose.

Authors:  M W Bauer; L E Driskill; W Callen; M A Snead; E J Mathur; R M Kelly
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

9.  Thermodynamics of BPTI folding.

Authors:  G I Makhatadze; K S Kim; C Woodward; P L Privalov
Journal:  Protein Sci       Date:  1993-12       Impact factor: 6.725

10.  Conformational stability of apoflavodoxin.

Authors:  C G Genzor; A Beldarraín; C Gómez-Moreno; J L López-Lacomba; M Cortijo; J Sancho
Journal:  Protein Sci       Date:  1996-07       Impact factor: 6.725

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