| Literature DB >> 25275493 |
Laura L Hermann1, Butsaya Thaisomboonsuk2, Yongyuth Poolpanichupatam2, Richard G Jarman3, Siripen Kalayanarooj4, Ananda Nisalak2, In-Kyu Yoon2, Stefan Fernandez2.
Abstract
BACKGROUND: Currently, no dengue NS1 detection kit has regulatory approval for the diagnosis of acute dengue fever. Here we report the sensitivity and specificity of the InBios DEN Detect NS1 ELISA using a panel of well characterized human acute fever serum specimens. METHODOLOGY/PRINCIPALEntities:
Mesh:
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Year: 2014 PMID: 25275493 PMCID: PMC4183466 DOI: 10.1371/journal.pntd.0003193
Source DB: PubMed Journal: PLoS Negl Trop Dis ISSN: 1935-2727
Summary of study population.
| Confirmed Dengue n = 314 | Other Febrile Illness n = 20 | |
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| Median Age, years, (IQR | 9 (6 – 12) 1 month – 24.7 yrs | 7 (4 – 9) 7 months – 15 yrs |
| Male∶Female | 144 ∶ 170 | 8∶12 |
| Median Days from Onset of Illness, (IQR | 4 (3 – 5) | 4 (3 – 5) |
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| RT-PCR only | 3 (1.0%) | |
| Serology only | 15 (4.8%) | |
| RT-PCR and Serology | 296 (94.3%) | |
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| DENV-1 | 96 (30.6%) | |
| DENV-2 | 95 (30.3%) | |
| DENV-3 | 96 (30.6%) | |
| DENV-4 | 12 (3.8%) | |
| Indeterminate | 15 (4.8%) | |
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| Primary | 51 (16.2%) | |
| Secondary | 260 (82.8%) | |
| Indeterminate | 3 (1.0%) | |
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| Dengue Fever | 159 (50.6%) | |
| Dengue Hemorrhagic Fever | 141 (44.9%) | |
| Other | 14 (4.5%) |
IQR – interquartile range.
Represents subjects confirmed as dengue positive by serological testing only. The infecting serotype was unable to be determined since they were negative by RT-PCR.
Represents subjects confirmed as dengue positive by RT-PCR only. Serological studies were not positive and primary or secondary infection could not be determined.
Dengue Fever clinical diagnosis based on SEARO WHO guidelines [22].
Includes patients clinically diagnosed with DHF with plasma leakage, DSS and deaths based on SEARO WHO guidelines [22].
No diagnosis was given in 8 cases. Other clinical diagnoses included one each of bronchitis, gastritis, viral gastroenteritis, viral-induced thrombocytopenia, query rickettsial infection and nonspecific viral infection.
Overall performance characteristics of the InBios and Bio-Rad assays compared to reference standarda.
| Sensitivity, % (95% CI | Specificity, % (95% CI) | Diagnostic Accuracy, % (95% CI) | PPV | NPV | |
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| 86.0 (270/314) | 100.0 (20/20) | 86.8 (290/334) | 100 (270/270) | 31.3 (20/64) |
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| 72.8 (227/314) | 100.0 (20/20) | 74.0 (247/334) | 100 (227/227) | 18.7 (20/107) |
The composite reference standard included samples that were positive either by serology and/or RT-PCR.
CI – confidence interval.
PPV – positive predictive value.
NPV – negative predictive value.
Sensitivity = (true positives)/(total positive by reference standard).
Specificity = (true negatives)/(total negative by reference standard).
Diagnostic Accuracy = (true positives+true negatives)/(total number of samples).
PPV = (true positives)/(total positive by InBios or Bio-Rad assay).
NPV = (true negatives)/(total negative by InBios or Bio-Rad assay).
Sensitivity of InBios and Bio-Rad assays differentiated by primary or secondary infection.
| Number of Specimens | Median DOI | InBios Sensitivity (95% CI | Bio-Rad Sensitivity (95% CI | |
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| 51 | 4 (3 – 6) | 98.8% (89.7–100.0) | 96.1% (86.8–99.0) |
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| 260 | 4 (3 – 5) | 83.5% (78.5–87.5) | 67.3% (61.4–72.7) |
Total number of DENV positive samples is 314.
DOI – days after onset of illness.
IQR – interquartile range.
CI – confidence interval.
Figure 1Sensitivity of InBios and Bio-Rad Assays stratified by date after onset of illness in (A) All infections and in (B) Primary and (C) Secondary infections.
Serum samples (total samples, n = 314; primary, n = 51; secondary, n = 260) were tested using the InBios and Bio-Rad NS1 kits. Sensitivity was plotted against day post-onset of illness. p-values were calculated using McNemar's Chi-square test. NA – not applicable. Unable to do statistical analysis when value equals 0. NS – not significant.
Sensitivity of InBios and Bio-Rad assays based on serotype.
| Test | DENV-1 Sensitivity n = 96 (95% CI) | DENV-2 Sensitivity n = 95 (95% CI) | DENV-3 Sensitivity n = 96 (95% CI) | DENV-4 Sensitivity n = 12 (95% CI) |
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| 92.7% (85.7–96.4) | 89.5% (81.2–94.2) | 81.3% (72.3–87.8) | 75.0% (46.8–91.1) |
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| 90.6% (83.1–95.0) | 52.6% (42.7–62.4) | 79.2% (70.0–86.1) | 58.3% (32.0–80.7) |
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| 0.48 | <0.0001 | 0.6171 | 0.4795 |
Sensitivity of InBios and Bio-Rad assays based on clinical diagnosis and serological diagnosis.
| Overall | Primary Infection | Secondary Infection | ||||
| Test | Dengue Fever | Dengue Hemorrhagic Fever | Dengue Fever Sensitivity n = 24 | Dengue Hemorrhagic Fever Sensitivity n = 22 | Dengue Fever Sensitivity n = 134 | Dengue Hemorrhagic Fever Sensitivity n = 118 |
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| 3.9 | 3.8 | 4.4 | 4.1 | 3.8 | 3.8 |
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| 85.5% (79.2–90.2) | 85.8% (79.1–90.6) | 100.0% (86.2–100.0) | 95.5% (78.2–99.2) | 82.8% (75.6–88.3) | 83.4% (76.2–89.4) |
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| 76.1% (68.9–82.1) | 66.7% 58.5–73.9) | 100.0% (86.2–100.0) | 90.9% (72.2–97.5) | 71.6% (63.5–78.6) | 61.7% (52.9–70.1) |
Dengue Fever clinical diagnosis based on SEARO WHO guidelines [22].
Includes patients clinically diagnosed with DHF with plasma leakage, DSS and deaths based on SEARO WHO guidelines [22].
Total number of Dengue Fever equals 159, but 1 case could not be classified as primary or secondary infection.
Total number of Dengue Hemorrhagic Fever equals 141, but 1 case could not be classified as primary or secondary infection.