Literature DB >> 25271843

Optimization of a free water elimination two-compartment model for diffusion tensor imaging.

Andrew R Hoy1, Cheng Guan Koay2, Steven R Kecskemeti3, Andrew L Alexander4.   

Abstract

Diffusion tensor imaging is used to measure the diffusion of water in tissue. The diffusion properties carry information about the relative organization and structure of the underlying tissue. In the case of a single voxel containing both tissue and a fast diffusing component such as free water, a single diffusion tensor is no longer appropriate. A two-tensor free water elimination model has previously been proposed to correct for the case of volume mixing. Here, this model was implemented in a straightforward but novel manner without the use of spatial constraints. The optimal acquisition parameters were investigated through Monte Carlo simulations and human brain imaging studies. At a signal-to-noise ratio of 40 with 64 diffusion-weighted encoding images, the most accurate estimates of fast diffusion signal were obtained with two diffusion-weighted shells (b-value in s/mm(2)×number of directions) of 500×32 and 1500×32. The potential bias in fractional anisotropy induced by this two-compartment model was more than an order of magnitude less than the error of using the single diffusion tensor model in the presence of partial volume effects with free water. This strategy may be useful for characterizing the diffusion of tissues adjacent to cerebral spinal fluid (CSF), tissues affected by edema, and removing artifacts from blurring and ghosting of the CSF signal. Published by Elsevier Inc.

Entities:  

Keywords:  DTI; Diffusion modeling; Diffusion tensor imaging; Free water

Mesh:

Year:  2014        PMID: 25271843      PMCID: PMC4312191          DOI: 10.1016/j.neuroimage.2014.09.053

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  23 in total

1.  Analysis of partial volume effects in diffusion-tensor MRI.

Authors:  A L Alexander; K M Hasan; M Lazar; J S Tsuruda; D L Parker
Journal:  Magn Reson Med       Date:  2001-05       Impact factor: 4.668

Review 2.  The basis of anisotropic water diffusion in the nervous system - a technical review.

Authors:  Christian Beaulieu
Journal:  NMR Biomed       Date:  2002 Nov-Dec       Impact factor: 4.044

3.  Echo-planar imaging of intravoxel incoherent motion.

Authors:  R Turner; D Le Bihan; J Maier; R Vavrek; L K Hedges; J Pekar
Journal:  Radiology       Date:  1990-11       Impact factor: 11.105

4.  Diffusion tensor tractography of the limbic system.

Authors:  Luis Concha; Donald W Gross; Christian Beaulieu
Journal:  AJNR Am J Neuroradiol       Date:  2005-10       Impact factor: 3.825

5.  New modeling and experimental framework to characterize hindered and restricted water diffusion in brain white matter.

Authors:  Yaniv Assaf; Raisa Z Freidlin; Gustavo K Rohde; Peter J Basser
Journal:  Magn Reson Med       Date:  2004-11       Impact factor: 4.668

6.  T1, T2 relaxation and magnetization transfer in tissue at 3T.

Authors:  Greg J Stanisz; Ewa E Odrobina; Joseph Pun; Michael Escaravage; Simon J Graham; Michael J Bronskill; R Mark Henkelman
Journal:  Magn Reson Med       Date:  2005-09       Impact factor: 4.668

Review 7.  Extracellular space structure revealed by diffusion analysis.

Authors:  C Nicholson; E Syková
Journal:  Trends Neurosci       Date:  1998-05       Impact factor: 13.837

8.  Toward a quantitative assessment of diffusion anisotropy.

Authors:  C Pierpaoli; P J Basser
Journal:  Magn Reson Med       Date:  1996-12       Impact factor: 4.668

9.  Acquisition strategy to reduce cerebrospinal fluid partial volume effects for improved DTI tractography.

Authors:  Corey A Baron; Christian Beaulieu
Journal:  Magn Reson Med       Date:  2014-04-10       Impact factor: 4.668

10.  MR diffusion tensor spectroscopy and imaging.

Authors:  P J Basser; J Mattiello; D LeBihan
Journal:  Biophys J       Date:  1994-01       Impact factor: 4.033

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  43 in total

1.  Comparison of two different analysis approaches for DTI free-water corrected and uncorrected maps in the study of white matter microstructural integrity in individuals with depression.

Authors:  Maurizio Bergamino; Rayus Kuplicki; Teresa A Victor; Yoon-Hee Cha; Martin P Paulus
Journal:  Hum Brain Mapp       Date:  2017-06-20       Impact factor: 5.038

2.  Magnetic resonance T1w/T2w ratio: A parsimonious marker for Parkinson disease.

Authors:  Guangwei Du; Mechelle M Lewis; Christopher Sica; Lan Kong; Xuemei Huang
Journal:  Ann Neurol       Date:  2018-12-19       Impact factor: 10.422

Review 3.  In vivo imaging of neuroinflammation in schizophrenia.

Authors:  Ofer Pasternak; Marek Kubicki; Martha E Shenton
Journal:  Schizophr Res       Date:  2015-06-03       Impact factor: 4.939

Review 4.  On modeling.

Authors:  Dmitry S Novikov; Valerij G Kiselev; Sune N Jespersen
Journal:  Magn Reson Med       Date:  2018-03-01       Impact factor: 4.668

5.  Free water elimination diffusion tractography: A comparison with conventional and fluid-attenuated inversion recovery, diffusion tensor imaging acquisitions.

Authors:  Andrew R Hoy; Steven R Kecskemeti; Andrew L Alexander
Journal:  J Magn Reson Imaging       Date:  2015-04-20       Impact factor: 4.813

6.  Fast and accurate initialization of the free-water imaging model parameters from multi-shell diffusion MRI.

Authors:  Ørjan Bergmann; Rafael Henriques; Carl-Fredrik Westin; Ofer Pasternak
Journal:  NMR Biomed       Date:  2019-12-19       Impact factor: 4.044

7.  Identifying Schizo-Obsessive Comorbidity by Tract-Based Spatial Statistics and Probabilistic Tractography.

Authors:  Yong-Ming Wang; Zhuo-Ya Yang; Xin-Lu Cai; Han-Yu Zhou; Rui-Ting Zhang; Han-Xue Yang; Yun-Si Liang; Xiong-Zhao Zhu; Kristoffer Hougaard Madsen; Thomas Alrik Sørensen; Arne Møller; Zhen Wang; Eric F C Cheung; Raymond C K Chan
Journal:  Schizophr Bull       Date:  2020-02-26       Impact factor: 9.306

8.  Design and validation of diffusion MRI models of white matter.

Authors:  Ileana O Jelescu; Matthew D Budde
Journal:  Front Phys       Date:  2017-11-28

9.  Perivascular space fluid contributes to diffusion tensor imaging changes in white matter.

Authors:  Farshid Sepehrband; Ryan P Cabeen; Jeiran Choupan; Giuseppe Barisano; Meng Law; Arthur W Toga
Journal:  Neuroimage       Date:  2019-04-30       Impact factor: 6.556

10.  Degeneracy in model parameter estimation for multi-compartmental diffusion in neuronal tissue.

Authors:  Ileana O Jelescu; Jelle Veraart; Els Fieremans; Dmitry S Novikov
Journal:  NMR Biomed       Date:  2015-11-29       Impact factor: 4.044

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