| Literature DB >> 25264387 |
L Lombard1, L M Serrato-Diaz2, R Cheewangkoon3, R D French-Monar2, C Decock4, P W Crous5.
Abstract
Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic studies of these fungi have relied on morphology and DNA sequence comparisons of the internal transcribed spacer region of the nuclear rDNA (ITS) and the β-tubulin gene regions. Employing DNA sequence data from four loci (β-tubulin, histone H3, ITS, and translation elongation factor 1-alpha) and morphological comparisons, the taxonomic status of the genus Gliocephalotrichum was re-evaluated. As a result five species are newly described, namely G. humicola (Taiwan, soil), G. mexicanum (rambutan fruit from Mexico), G. nephelii (rambutan fruit from Guatemala), G. queenslandicum (Australia, endophytic isolations) and G. simmonsii (rambutan fruit from Guatemala). Although species of Gliocephalotrichum are generally not regarded as important plant pathogens, their ability to cause post-harvest fruit rot could have an impact on fruit export and storage.Entities:
Keywords: Gliocephalotrichum; Leuconectria; phylogeny; taxonomy
Year: 2014 PMID: 25264387 PMCID: PMC4150073 DOI: 10.3767/003158514X680261
Source DB: PubMed Journal: Persoonia ISSN: 0031-5850 Impact factor: 11.051
Gliocephalotrichum isolates included in this study.
| Species | Culture accession | GenBank accession | Substrate | Country | Collector | |||
|---|---|---|---|---|---|---|---|---|
| BTUB | HIS3 | ITS | TEF | |||||
| CBS 250.91 | KF513182 | KF513323 | KF513251 | KF513405 | plant root | Brazil | L. Pfenning | |
| DQ374413 | KF513324 | DQ374408 | KF513406 | leaf litter | French Guiana | C. Decock & V. Robert | ||
| CBS 132042 = MUCL 46732 | DQ374414 | KF513325 | DQ374409 | KF513407 | leaf litter | French Guiana | C. Decock & V. Robert | |
| DQ377831 | KF513326 | DQ377831 | KF513408 | soil | USA | L.J. Wickerham | ||
| CBS 118.68 | KF513183 | KF513327 | KF513252 | KF513409 | air | Central African Republic | J. Nicot | |
| CBS 562.75 | KF513184 | KF513328 | KF513253 | KF513410 | Indonesia | I. Gandjar | ||
| CBS 451.92 = GJS 92-7 = ATCC 90145 = BPI 1113065 | KF513185 | KF513329 | KF513254 | KF513411 | Puerto Rico | W.R. Buck | ||
| CBS 104.95 | KF513186 | KF513330 | KF513255 | KF513412 | soil | Brazil | L. Pfenning | |
| CBS 113467 | KF513187 | KF513331 | KF513256 | KF513413 | soil | Thailand | M. Reblova | |
| CPC 13577 | KF513188 | KF513332 | KF513257 | KF513414 | USA | T. Sutton | ||
| CPC 21866 = MUCL 46552 | DQ377830 | KF513333 | DQ374406 | KF513415 | leaf litter | French Guiana | C. Decock & V. Robert | |
| CPC 21867 = MUCL 46553 | DQ377829 | KF513334 | DQ374407 | KF513416 | leaf litter | French Guiana | C. Decock & V. Robert | |
| CPC 23321 | KF513189 | KF513335 | KF513258 | KF513417 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23322 | KF513190 | KF513336 | KF513259 | KF513418 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23323 | KF513191 | KF513337 | KF513260 | KF513419 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23324 | KF513192 | KF513338 | KF513261 | KF513420 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23325 | KF513193 | KF513339 | KF513262 | KF513421 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23334 | KF513194 | KF513340 | KF513263 | KF513422 | Mexico | L.M. Serrato-Diaz | ||
| CPC 23335 | KF513195 | KF513341 | KF513264 | KF513423 | Mexico | L.M. Serrato-Diaz | ||
| CPC 23336 | KF513196 | KF513342 | KF513265 | KF513424 | Mexico | L.M. Serrato-Diaz | ||
| CPC 23337 | KF513197 | KF513343 | KF513266 | KF513425 | Mexico | L.M. Serrato-Diaz | ||
| CPC 23339 | KF513198 | KF513344 | KF513267 | KF513426 | Mexico | L.M. Serrato-Diaz | ||
| DQ377841 | KF513353 | DQ366705 | KF513435 | soil | Thailand | C. Klinsukont | ||
| CBS 903.70 = QM 9146 | KF513208 | KF513354 | KF513277 | KF513436 | soil | Thailand | S. Chomchalow | |
| CBS 904.70 = MUCL 18580 = QM 9147 | DQ377842 | KF513355 | DQ366706 | KF513437 | soil | Thailand | S. Chomchalow | |
| EU984072 | – | EF121859 | HM054075 | leaf litter | China | W.Y. Zhuang & Y. Nong | ||
| CBS 135945 | KF513209 | KF513356 | KF513278 | KF513438 | soil | Taiwan | P.W. Crous | |
| KF513210 | KF513357 | KF513279 | KF513439 | soil | Taiwan | P.W. Crous | ||
| CPC 23340 | KF513211 | KF513358 | KF513280 | KF513440 | soil | Taiwan | P.W. Crous | |
| CPC 23344 | KF513212 | KF513359 | KF513281 | KF513441 | soil | Taiwan | P.W. Crous | |
| CPC 23345 | KF513213 | KF513360 | KF513282 | KF513442 | soil | Taiwan | P.W. Crous | |
| CPC 23347 | KF513214 | KF513361 | KF513283 | KF513443 | soil | Taiwan | P.W. Crous | |
| DQ377835 | KF513367 | DQ278422 | KF513449 | leaf litter | French Guiana | C. Decock & V. Robert | ||
| CBS 132043 = MUCL 46694 | DQ377836 | KF513368 | DQ278421 | KF513450 | leaf litter | French Guiana | C. Decock & V. Robert | |
| KF513220 | KF513369 | KF513289 | KF513451 | Mexico | L.M. Serrato-Diaz | |||
| CBS 135948 | KF513221 | KF513370 | KF513290 | KF513452 | Mexico | L.M. Serrato-Diaz | ||
| DQ374410 | KF513371 | DQ366699 | KF513453 | soil | Zaïre | J.A. Meyer | ||
| CPC 21862 = MUCL 8137 | DQ374411 | – | DQ366700 | KF513454 | – | Zaïre | – | |
| CPC 21863 = MUCL 18349 | DQ374412 | – | DQ366701 | KF513455 | – | South Africa | – | |
| KF513222 | KF513372 | KF513291 | KF513456 | Guatamala | L.M. Serrato-Diaz | |||
| CBS 135950 | KF513223 | KF513373 | KF513292 | KF513457 | Guatamala | L.M. Serrato-Diaz | ||
| DQ374415 | – | DQ366707 | KF513458 | soil | USA | L.H. Huang | ||
| CBS 112956 = CPC 4713 | KF513224 | KF513374 | KF513293 | KF513459 | Australia | I. Steer & B. Paulus | ||
| KF513225 | KF513375 | KF513294 | KF513460 | Australia | I. Steer & B. Paulus | |||
| CBS 135951 | KF513226 | KF513376 | KF513295 | KF513461 | Guatamala | L.M. Serrato-Diaz | ||
| CBS 135952 | KF513227 | KF513377 | KF513296 | KF513462 | Guatamala | L.M. Serrato-Diaz | ||
| KF513228 | KF513378 | KF513297 | KF513463 | Guatamala | L.M. Serrato-Diaz | |||
| DQ377838 | KF513379 | DQ 366702 | KF513464 | soil | South Africa | H.J. Swart | ||
| CBS 983.69 | KF513229 | KF513380 | KF513298 | KF513465 | soil | Brazil | C. Ram | |
| CBS 511.81 | KF513230 | KF513381 | KF513299 | KF513466 | New Zealand | H.J. Boesewinkel | ||
| CBS 249.91 | KF513231 | KF513382 | KF513300 | KF513467 | root of unknown plant | Brazil | L. Pfenning | |
| CPC 21865 = MUCL 46551 = SING 0061759 | DQ377837 | KF513383 | DQ366704 | KF513468 | – | Singapore | C. Decock | |
| CPC 21868 = MUCL 46722 | DQ377840 | KF513384 | KF513301 | KF513469 | – | Malaysia | – | |
| CPC 23349 | KF513232 | KF513385 | KF513302 | KF513470 | Guatamala | L.M. Serrato-Diaz | ||
| CPC 23350 | KF513233 | KF513386 | KF513303 | KF513471 | Guatamala | L.M. Serrato-Diaz | ||
| CPC 23351 | KF513234 | KF513387 | KF513304 | KF513472 | Guatamala | L.M. Serrato-Diaz | ||
| CPC 23352 | KF513235 | KF513388 | KF513305 | KF513473 | Guatamala | L.M. Serrato-Diaz | ||
| CPC 23353 | KF513236 | KF513389 | KF513306 | KF513474 | Guatamala | L.M. Serrato-Diaz | ||
| CPC 23354 | KF513237 | KF513390 | KF513307 | KF513475 | Guatamala | L.M. Serrato-Diaz | ||
| CPC 23355 | KF513238 | KF513391 | KF513308 | KF513476 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23356 | KF513239 | KF513392 | KF513309 | KF513477 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23357 | KF513240 | KF513393 | KF513310 | KF513478 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23358 | KF513241 | KF513394 | KF513311 | KF513479 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23359 | KF513242 | KF513395 | KF513312 | KF513480 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23360 | KF513243 | KF513396 | KF513313 | KF513481 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23361 | KF513244 | KF513397 | KF513314 | KF513482 | Puerto Rico | L.M. Serrato-Diaz | ||
| CPC 23362 | KF513245 | KF513398 | KF513315 | KF513483 | Puerto Rico | L.M. Serrato-Diaz | ||
| CBS 109446 | KF513248 | KF513402 | KF513320 | KF513489 | Venezuela | I. Hernandez | ||
| CBS 254.82 | KF513249 | KF513403 | KF513321 | KF513490 | Indonesia | J.E. Willemstein-Sytema | ||
| CBS 135954 | KF513250 | KF513404 | KF513322 | KF513491 | Guatamala | L.M. Serrato-Diaz | ||
1 ATCC: American Type Culture Collection, Virginia, USA; BPI: U.S. National Fungus Collections, USDA, ARS, Beltsville, Maryland, USA; CBS: CBS-KNAW Fungal Biodiversity Centre, Utrecht, The Netherlands; CPC: working collection of Pedro Crous housed at CBS; HMAS: Key Laboratory of Systematic Mycology and Lichenology Laboratory, Institute of Microbiology, Chinese Academy of Science, Beijing 100101, P.R. China; IFO: Institute for Fermentation, 17-85, Juso-honmachi, 2-chrome, Yodogawa-ku, Osaka 532, Japan; IMI: International Mycological Institute, CABI-Bioscience, Egham, Bakeham Lane, UK; GJS: Gary J. Samuels personal collection; MUCL: Mycothéque, Laboratoire de Mycologie Systématique st Appliqéq, l’Université, Louvian-la-Neuve, Belguim; NRRL: Agricultural Research Service, USDA, Washington, USA; QM: Quatermaster Culture Collection, Material Protection and Biotechnology Division, Science and Advanced Technology Directorate, U.S. Army Natick Research and Development Center, Natick, Massachusetts 01760-5020, USA; SING: Parks and Recreation Department, Botanical Gardens, Cluny Road, Singapore 1025.
2 BTUB = β-tubulin, HIS3 = histone H3, ITS = internal transcribed spacer regions 1 and 2 and the 5.8S gene of the ribosomal DNA, TEF = translation elongation factor 1-alpha.
* Ex-type isolates indicated in bold.
Fig. 1One of 1 000 most parsimonious trees obtained from a heuristic search with 1 000 random addition sequences of the combined sequences of β-tubulin, histone H3, internal transcribed spacer region and translation elongation factor 1-alpha sequence alignments of the Gliocephalotrichum isolates used in this study. Scale bar shows 10 changes. Bootstrap support values and Bayesian posterior probability values are shown at the nodes. Thickened lines indicate branches in the strict consensus tree and the consensus tree of the Bayesian analysis. The tree was rooted to Gliocladiopsis tenuis (IMI 68205) and Gliocladiopsis sagariensis (CBS 199.55). Ex-type isolates are indicated in bold.
Fig. 2Gliocephalotrichum bacillisporum (CBS 126572, ex-type culture). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d, e. penicillus; f–i. apex of stipe extensions; j. conidia; k. chlamydospores formed in chains. — Scale bars: b = 50 μm; c = 20 μm; d = 10 μm (applies to e–k).
Fig. 3Gliocephalotrichum bulbilium (CBS 242.62, ex-type culture). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d–h. apex of stipe extensions; i, j. penicillus; k. bulbilloid aggregate of chlamydospores; l. conidia. — Scale bars: b = 50 μm; c = 20 μm; i = 10 μm (applies to d–j); k = 10 μm (applies to l).
Fig. 4Gliocephalotrichum humicola (CBS 135946, ex-type). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d, e. penicillus; f, g. apex of stipe extensions; h. conidia; i. chlamydospores. — Scale bars: b = 50 μm; c = 20 μm; d = 10 μm (applies to e–i).
Fig. 5Gliocephalotrichum longibrachium (CBS 126571, ex-type culture). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d, e. penicillus; f–h. apex of stipe extensions; i. conidia; j. bulbilloid aggregate of chlamydospores. — Scale bars: b = 50 μm (applies to c); d = 10 μm (applies to e–j).
Fig. 6Gliocephalotrichum mexicanum (CBS 135947, ex-type culture). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d, e. penicillus; f–h. apex of stipe extensions; i. conidia; j. bulbilloid aggregate of chlamydospores. — Scale bars: b = 50 μm; c = 20 μm; d = 10 μm (applies to e–j).
Fig. 7Gliocephalotrichum microchlamydosporum (CBS 345.64, ex-type culture). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d, e. penicillus; f–h. apex of stipe extensions; i. conidia; j. chlamydospore. — Scale bars: b = 50 μm (applies to c); d = 10 μm (applies to e–j).
Fig. 8Gliocephalotrichum nephelii (CBS 135949, ex-type culture). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d, e. penicillus; f–h. apex of stipe extensions; i. conidia; j. chlamydospores. — Scale bars: b = 50 μm (applies to c); d = 10 μm (applies to e–j).
Fig. 9Gliocephalotrichum queenslandicum (CBS 114868, ex-type culture). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d. conidia; e, f. penicillus; g–i. apex of stipe extensions; j. chlamydospores; k. bulbilloid aggregate of chlamydospores. — Scale bars: b = 20 μm; c = 50 μm; d = 10 μm (applies to e–k).
Fig. 10Gliocephalotrichum simmonsii (CBS 135953, ex-type culture). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d, e. penicillus; f–h. apex of stipe extensions; i. conidia; j. bulbilloid aggregate of chlamydospores. — Scale bars: b = 50 μm (applies to c); d = 10 μm (applies to e–j).
Fig. 11Gliocephalotrichum simplex (CBS267.65, ex-type culture). a. Conidiophores on carnation leaf on SNA; b, c. conidiophores; d, e. penicillus; f–h. apex of stipe extensions; i. conidia; j. chlamydospore. — Scale bars: b = 50 μm (applies to c); d = 10 μm (applies to e–j).