Literature DB >> 25258081

Ligand binding to the FeMo-cofactor: structures of CO-bound and reactivated nitrogenase.

Thomas Spatzal1, Kathryn A Perez2, Oliver Einsle3, James B Howard4, Douglas C Rees1.   

Abstract

The mechanism of nitrogenase remains enigmatic, with a major unresolved issue concerning how inhibitors and substrates bind to the active site. We report a crystal structure of carbon monoxide (CO)-inhibited nitrogenase molybdenum-iron (MoFe)-protein at 1.50 angstrom resolution, which reveals a CO molecule bridging Fe2 and Fe6 of the FeMo-cofactor. The μ2 binding geometry is achieved by replacing a belt-sulfur atom (S2B) and highlights the generation of a reactive iron species uncovered by the displacement of sulfur. The CO inhibition is fully reversible as established by regain of enzyme activity and reappearance of S2B in the 1.43 angstrom resolution structure of the reactivated enzyme. The substantial and reversible reorganization of the FeMo-cofactor accompanying CO binding was unanticipated and provides insights into a catalytically competent state of nitrogenase.
Copyright © 2014, American Association for the Advancement of Science.

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Year:  2014        PMID: 25258081      PMCID: PMC4205161          DOI: 10.1126/science.1256679

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  30 in total

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Authors:  Barbara K. Burgess; David J. Lowe
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

2.  Investigation of CO binding and release from Mo-nitrogenase during catalytic turnover.

Authors:  L M Cameron; B J Hales
Journal:  Biochemistry       Date:  1998-06-30       Impact factor: 3.162

3.  Vanadium nitrogenase reduces CO.

Authors:  Chi Chung Lee; Yilin Hu; Markus W Ribbe
Journal:  Science       Date:  2010-08-06       Impact factor: 47.728

4.  Role of the MoFe protein alpha-subunit histidine-195 residue in FeMo-cofactor binding and nitrogenase catalysis.

Authors:  C H Kim; W E Newton; D R Dean
Journal:  Biochemistry       Date:  1995-03-07       Impact factor: 3.162

5.  Structure of ADP x AIF4(-)-stabilized nitrogenase complex and its implications for signal transduction.

Authors:  H Schindelin; C Kisker; J L Schlessman; J B Howard; D C Rees
Journal:  Nature       Date:  1997-05-22       Impact factor: 49.962

6.  Biosynthesis of Nitrogenase FeMoco.

Authors:  Yilin Hu; Markus W Ribbe
Journal:  Coord Chem Rev       Date:  2011-05-01       Impact factor: 22.315

7.  Crystallographic structure and functional implications of the nitrogenase molybdenum-iron protein from azotobacter vinelandii.

Authors:  J Kim; D C Rees
Journal:  Nature       Date:  1992-12-10       Impact factor: 49.962

8.  How many metals does it take to fix N2? A mechanistic overview of biological nitrogen fixation.

Authors:  James B Howard; Douglas C Rees
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-06       Impact factor: 11.205

9.  Localization of a substrate binding site on the FeMo-cofactor in nitrogenase: trapping propargyl alcohol with an alpha-70-substituted MoFe protein.

Authors:  Paul M C Benton; Mikhail Laryukhin; Suzanne M Mayer; Brian M Hoffman; Dennis R Dean; Lance C Seefeldt
Journal:  Biochemistry       Date:  2003-08-05       Impact factor: 3.162

10.  Alkyne substrate interaction within the nitrogenase MoFe protein.

Authors:  Patricia C Dos Santos; Suzanne M Mayer; Brett M Barney; Lance C Seefeldt; Dennis R Dean
Journal:  J Inorg Biochem       Date:  2007-05-29       Impact factor: 4.155

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  93 in total

1.  Uncoupling binding of substrate CO from turnover by vanadium nitrogenase.

Authors:  Chi Chung Lee; Aaron W Fay; Tsu-Chien Weng; Courtney M Krest; Britt Hedman; Keith O Hodgson; Yilin Hu; Markus W Ribbe
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-29       Impact factor: 11.205

Review 2.  Catalytic N2-to-NH3 (or -N2H4) Conversion by Well-Defined Molecular Coordination Complexes.

Authors:  Matthew J Chalkley; Marcus W Drover; Jonas C Peters
Journal:  Chem Rev       Date:  2020-04-30       Impact factor: 60.622

3.  N-H Bond Dissociation Enthalpies and Facile H Atom Transfers for Early Intermediates of Fe-N2 and Fe-CN Reductions.

Authors:  Jonathan Rittle; Jonas C Peters
Journal:  J Am Chem Soc       Date:  2017-02-17       Impact factor: 15.419

4.  Effects of N2 Binding Mode on Iron-Based Functionalization of Dinitrogen to Form an Iron(III) Hydrazido Complex.

Authors:  Sean F McWilliams; Eckhard Bill; Gudrun Lukat-Rodgers; Kenton R Rodgers; Brandon Q Mercado; Patrick L Holland
Journal:  J Am Chem Soc       Date:  2018-06-29       Impact factor: 15.419

5.  Evaluation of the Catalytic Relevance of the CO-Bound States of V-Nitrogenase.

Authors:  Chi Chung Lee; Jarett Wilcoxen; Caleb J Hiller; R David Britt; Yilin Hu
Journal:  Angew Chem Int Ed Engl       Date:  2018-03-01       Impact factor: 15.336

6.  Computational Approach to Molecular Catalysis by 3d Transition Metals: Challenges and Opportunities.

Authors:  Konstantinos D Vogiatzis; Mikhail V Polynski; Justin K Kirkland; Jacob Townsend; Ali Hashemi; Chong Liu; Evgeny A Pidko
Journal:  Chem Rev       Date:  2018-10-30       Impact factor: 60.622

7.  Diiron bridged-thiolate complexes that bind N2 at the Fe(II)Fe(II), Fe(II)Fe(I), and Fe(I)Fe(I) redox states.

Authors:  Sidney E Creutz; Jonas C Peters
Journal:  J Am Chem Soc       Date:  2015-06-09       Impact factor: 15.419

8.  Production and isolation of vanadium nitrogenase from Azotobacter vinelandii by molybdenum depletion.

Authors:  Daniel Sippel; Julia Schlesier; Michael Rohde; Christian Trncik; Laure Decamps; Ivana Djurdjevic; Thomas Spatzal; Susana L A Andrade; Oliver Einsle
Journal:  J Biol Inorg Chem       Date:  2016-12-07       Impact factor: 3.358

9.  Dinitrogen binding and activation at a molybdenum-iron-sulfur cluster.

Authors:  Alex McSkimming; Daniel L M Suess
Journal:  Nat Chem       Date:  2021-05-27       Impact factor: 24.427

10.  Assignment of protonated R-homocitrate in extracted FeMo-cofactor of nitrogenase via vibrational circular dichroism spectroscopies.

Authors:  Lan Deng; Hongxin Wang; Christie H Dapper; William E Newton; Sergey Shilov; Shunlin Wang; Stephen P Cramer; Zhao-Hui Zhou
Journal:  Commun Chem       Date:  2020-10-28
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