Literature DB >> 25246540

Range of cell-wall alterations enhance saccharification in Brachypodium distachyon mutants.

Poppy E Marriott1, Richard Sibout2, Catherine Lapierre2, Jonatan U Fangel3, William G T Willats3, Herman Hofte2, Leonardo D Gómez1, Simon J McQueen-Mason4.   

Abstract

Lignocellulosic plant biomass is an attractive feedstock for the production of sustainable biofuels, but the commercialization of such products is hampered by the high costs of processing this material into fermentable sugars (saccharification). One approach to lowering these costs is to produce crops with cell walls that are more susceptible to hydrolysis to reduce preprocessing and enzyme inputs. To deepen our understanding of the molecular genetic basis of lignocellulose recalcitrance, we have screened a mutagenized population of the model grass Brachypodium distachyon for improved saccharification with an industrial polysaccharide-degrading enzyme mixture. From an initial screen of 2,400 M2 plants, we selected 12 lines that showed heritable improvements in saccharification, mostly with no significant reduction in plant size or stem strength. Characterization of these putative mutants revealed a variety of alterations in cell-wall components. We have mapped the underlying genetic lesions responsible for increased saccharification using a deep sequencing approach, and here we report the mapping of one of the causal mutations to a narrow region in chromosome 2. The most likely candidate gene in this region encodes a GT61 glycosyltransferase, which has been implicated in arabinoxylan substitution. Our work shows that forward genetic screening provides a powerful route to identify factors that impact on lignocellulose digestibility, with implications for improving feedstock for cellulosic biofuel production.

Entities:  

Keywords:  feruloylation; lignin; lignocellulosic biofuel; matrix polysaccharides

Mesh:

Substances:

Year:  2014        PMID: 25246540      PMCID: PMC4209982          DOI: 10.1073/pnas.1414020111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  Designed for deconstruction--poplar trees altered in cell wall lignification improve the efficacy of bioethanol production.

Authors:  Shawn D Mansfield; Kyu-Young Kang; Clint Chapple
Journal:  New Phytol       Date:  2012-01-12       Impact factor: 10.151

2.  Down-regulation of caffeic acid o-methyltransferase in maize revisited using a transgenic approach.

Authors:  Joel Piquemal; Simon Chamayou; Isabelle Nadaud; Michel Beckert; Yves Barrière; Isabelle Mila; Catherine Lapierre; Joan Rigau; Pere Puigdomenech; Alain Jauneau; Catherine Digonnet; Alain-Michel Boudet; Deborah Goffner; Magalie Pichon
Journal:  Plant Physiol       Date:  2002-12       Impact factor: 8.340

3.  Environmental, economic, and energetic costs and benefits of biodiesel and ethanol biofuels.

Authors:  Jason Hill; Erik Nelson; David Tilman; Stephen Polasky; Douglas Tiffany
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-12       Impact factor: 11.205

4.  Down-regulation of PoGT47C expression in poplar results in a reduced glucuronoxylan content and an increased wood digestibility by cellulase.

Authors:  Chanhui Lee; Quincy Teng; Wenlin Huang; Ruiqin Zhong; Zheng-Hua Ye
Journal:  Plant Cell Physiol       Date:  2009-04-23       Impact factor: 4.927

5.  Improvement of biomass through lignin modification.

Authors:  Xu Li; Jing-Ke Weng; Clint Chapple
Journal:  Plant J       Date:  2008-05       Impact factor: 6.417

6.  Overexpression of a BAHD acyltransferase, OsAt10, alters rice cell wall hydroxycinnamic acid content and saccharification.

Authors:  Laura E Bartley; Matthew L Peck; Sung-Ryul Kim; Berit Ebert; Chithra Manisseri; Dawn M Chiniquy; Robert Sykes; Lingfang Gao; Carsten Rautengarten; Miguel E Vega-Sánchez; Peter I Benke; Patrick E Canlas; Peijian Cao; Susan Brewer; Fan Lin; Whitney L Smith; Xiaohan Zhang; Jay D Keasling; Rolf E Jentoff; Steven B Foster; Jizhong Zhou; Angela Ziebell; Gynheung An; Henrik V Scheller; Pamela C Ronald
Journal:  Plant Physiol       Date:  2013-02-07       Impact factor: 8.340

7.  An engineered monolignol 4-o-methyltransferase depresses lignin biosynthesis and confers novel metabolic capability in Arabidopsis.

Authors:  Kewei Zhang; Mohammad-Wadud Bhuiya; Jorge Rencoret Pazo; Yuchen Miao; Hoon Kim; John Ralph; Chang-Jun Liu
Journal:  Plant Cell       Date:  2012-07-31       Impact factor: 11.277

8.  A novel bioinformatics approach identifies candidate genes for the synthesis and feruloylation of arabinoxylan.

Authors:  Rowan A C Mitchell; Paul Dupree; Peter R Shewry
Journal:  Plant Physiol       Date:  2007-03-09       Impact factor: 8.340

9.  Comprehensive compositional analysis of plant cell walls (Lignocellulosic biomass) part I: lignin.

Authors:  Cliff E Foster; Tina M Martin; Markus Pauly
Journal:  J Vis Exp       Date:  2010-03-11       Impact factor: 1.355

10.  Versatile high resolution oligosaccharide microarrays for plant glycobiology and cell wall research.

Authors:  Henriette L Pedersen; Jonatan U Fangel; Barry McCleary; Christian Ruzanski; Maja G Rydahl; Marie-Christine Ralet; Vladimir Farkas; Laura von Schantz; Susan E Marcus; Mathias C F Andersen; Rob Field; Mats Ohlin; J Paul Knox; Mads H Clausen; William G T Willats
Journal:  J Biol Chem       Date:  2012-09-17       Impact factor: 5.157

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  24 in total

1.  Systems analysis in Cellvibrio japonicus resolves predicted redundancy of β-glucosidases and determines essential physiological functions.

Authors:  Cassandra E Nelson; Artur Rogowski; Carl Morland; Joshua A Wilhide; Harry J Gilbert; Jeffrey G Gardner
Journal:  Mol Microbiol       Date:  2017-02-28       Impact factor: 3.501

Review 2.  Brachypodium: A Monocot Grass Model Genus for Plant Biology.

Authors:  Karen-Beth G Scholthof; Sonia Irigoyen; Pilar Catalan; Kranthi K Mandadi
Journal:  Plant Cell       Date:  2018-07-11       Impact factor: 11.277

3.  Screening of rice mutants with improved saccharification efficiency results in the identification of CONSTITUTIVE PHOTOMORPHOGENIC 1 and GOLD HULL AND INTERNODE 1.

Authors:  Ko Hirano; Reiko Masuda; Wakana Takase; Yoichi Morinaka; Mayuko Kawamura; Yoshinobu Takeuchi; Hiroki Takagi; Hiroki Yaegashi; Satoshi Natsume; Ryohei Terauchi; Toshihisa Kotake; Yasuyuki Matsushita; Takashi Sazuka
Journal:  Planta       Date:  2017-03-29       Impact factor: 4.116

4.  How cell wall complexity influences saccharification efficiency in Miscanthus sinensis.

Authors:  Amanda P De Souza; Claire L Alvim Kamei; Andres F Torres; Sivakumar Pattathil; Michael G Hahn; Luisa M Trindade; Marcos S Buckeridge
Journal:  J Exp Bot       Date:  2015-04-23       Impact factor: 6.992

5.  Cell Wall Composition and Biomass Recalcitrance Differences Within a Genotypically Diverse Set of Brachypodium distachyon Inbred Lines.

Authors:  Cynthia L Cass; Anastasiya A Lavell; Nicholas Santoro; Cliff E Foster; Steven D Karlen; Rebecca A Smith; John Ralph; David F Garvin; John C Sedbrook
Journal:  Front Plant Sci       Date:  2016-05-26       Impact factor: 5.753

6.  Linkage Mapping of Stem Saccharification Digestibility in Rice.

Authors:  Bohan Liu; Leonardo D Gómez; Cangmei Hua; Lili Sun; Imran Ali; Linli Huang; Chunyan Yu; Rachael Simister; Clare Steele-King; Yinbo Gan; Simon J McQueen-Mason
Journal:  PLoS One       Date:  2016-07-14       Impact factor: 3.240

7.  Active Sites of Reduced Epidermal Fluorescence1 (REF1) Isoforms Contain Amino Acid Substitutions That Are Different between Monocots and Dicots.

Authors:  Tagnon D Missihoun; Simeon O Kotchoni; Dorothea Bartels; Peta Bonham-Smith
Journal:  PLoS One       Date:  2016-10-31       Impact factor: 3.240

8.  A mixed-linkage (1,3;1,4)-β-D-glucan specific hydrolase mediates dark-triggered degradation of this plant cell wall polysaccharide.

Authors:  Florian J Kraemer; China Lunde; Moritz Koch; Benjamin M Kuhn; Clemens Ruehl; Patrick J Brown; Philipp Hoffmann; Vera Göhre; Sarah Hake; Markus Pauly; Vicente Ramírez
Journal:  Plant Physiol       Date:  2021-04-23       Impact factor: 8.340

9.  Analysis of a Modern Hybrid and an Ancient Sugarcane Implicates a Complex Interplay of Factors in Affecting Recalcitrance to Cellulosic Ethanol Production.

Authors:  Viviane Guzzo de Carli Poelking; Andrea Giordano; Maria Esther Ricci-Silva; Thomas Christopher Rhys Williams; Diego Alves Peçanha; Marília Contin Ventrella; Jorge Rencoret; John Ralph; Márcio Henrique Pereira Barbosa; Marcelo Loureiro
Journal:  PLoS One       Date:  2015-08-07       Impact factor: 3.240

10.  Exploring tomato Solanum pennellii introgression lines for residual biomass and enzymatic digestibility traits.

Authors:  G Caruso; L D Gomez; F Ferriello; A Andolfi; C Borgonuovo; A Evidente; R Simister; S J McQueen-Mason; D Carputo; L Frusciante; M R Ercolano
Journal:  BMC Genet       Date:  2016-04-05       Impact factor: 2.797

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