Literature DB >> 25220471

Four levels of hierarchical organization, including noncovalent chainmail, brace the mature tumor herpesvirus capsid against pressurization.

Z Hong Zhou1, Wong Hoi Hui2, Sanket Shah3, Jonathan Jih4, Christine M O'Connor5, Michael B Sherman6, Dean H Kedes7, Stan Schein8.   

Abstract

Like many double-stranded DNA viruses, tumor gammaherpesviruses Epstein-Barr virus and Kaposi's sarcoma-associated herpesvirus withstand high internal pressure. Bacteriophage HK97 uses covalent chainmail for this purpose, but how this is achieved noncovalently in the much larger gammaherpesvirus capsid is unknown. Our cryoelectron microscopy structure of a gammaherpesvirus capsid reveals a hierarchy of four levels of organization: (1) Within a hexon capsomer, each monomer of the major capsid protein (MCP), 1,378 amino acids and six domains, interacts with its neighboring MCPs at four sites. (2) Neighboring capsomers are linked in pairs by MCP dimerization domains and in groups of three by heterotrimeric triplex proteins. (3) Small (∼280 amino acids) HK97-like domains in MCP monomers alternate with triplex heterotrimers to form a belt that encircles each capsomer. (4) One hundred sixty-two belts concatenate to form noncovalent chainmail. The triplex heterotrimer orchestrates all four levels and likely drives maturation to an angular capsid that can withstand pressurization.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 25220471      PMCID: PMC4433476          DOI: 10.1016/j.str.2014.05.019

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  62 in total

1.  Protein structure prediction on the Web: a case study using the Phyre server.

Authors:  Lawrence A Kelley; Michael J E Sternberg
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

2.  Virology. Pressurized viruses.

Authors:  William M Gelbart; Charles M Knobler
Journal:  Science       Date:  2009-03-27       Impact factor: 47.728

3.  Three-dimensional structure of the Epstein-Barr virus capsid.

Authors:  Raphaele Germi; Gregory Effantin; Laurence Grossi; Rob W H Ruigrok; Patrice Morand; Guy Schoehn
Journal:  J Gen Virol       Date:  2012-05-16       Impact factor: 3.891

4.  Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling.

Authors:  Matthew L Baker; Corey F Hryc; Qinfen Zhang; Weimin Wu; Joanita Jakana; Cameron Haase-Pettingell; Pavel V Afonine; Paul D Adams; Jonathan A King; Wen Jiang; Wah Chiu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-09       Impact factor: 11.205

5.  Maturation in action: CryoEM study of a viral capsid caught during expansion.

Authors:  David Veesler; Joel Quispe; Nikolaus Grigorieff; Clinton S Potter; Bridget Carragher; John E Johnson
Journal:  Structure       Date:  2012-06-28       Impact factor: 5.006

6.  Structure of the pseudorabies virus capsid: comparison with herpes simplex virus type 1 and differential binding of essential minor proteins.

Authors:  F L Homa; J B Huffman; K Toropova; H R Lopez; A M Makhov; J F Conway
Journal:  J Mol Biol       Date:  2013-07-01       Impact factor: 5.469

7.  Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography.

Authors:  David Veesler; Thiam-Seng Ng; Anoop K Sendamarai; Brian J Eilers; C Martin Lawrence; Shee-Mei Lok; Mark J Young; John E Johnson; Chi-yu Fu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-21       Impact factor: 11.205

8.  Rhesus macaque rhadinovirus-associated non-Hodgkin lymphoma: animal model for KSHV-associated malignancies.

Authors:  Beata U Orzechowska; Michael F Powers; Jerald Sprague; He Li; Bonnie Yen; Robert P Searles; Michael K Axthelm; Scott W Wong
Journal:  Blood       Date:  2008-08-29       Impact factor: 22.113

9.  The smallest capsid protein mediates binding of the essential tegument protein pp150 to stabilize DNA-containing capsids in human cytomegalovirus.

Authors:  Xinghong Dai; Xuekui Yu; Hao Gong; Xiaohong Jiang; Gerrado Abenes; Hongrong Liu; Sakar Shivakoti; William J Britt; Hua Zhu; Fenyong Liu; Z Hong Zhou
Journal:  PLoS Pathog       Date:  2013-08-15       Impact factor: 6.823

10.  A new topology of the HK97-like fold revealed in Bordetella bacteriophage by cryoEM at 3.5 A resolution.

Authors:  Xing Zhang; Huatao Guo; Lei Jin; Elizabeth Czornyj; Asher Hodes; Wong H Hui; Angela W Nieh; Jeff F Miller; Z Hong Zhou
Journal:  Elife       Date:  2013-12-17       Impact factor: 8.140

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  12 in total

1.  CryoEM and mutagenesis reveal that the smallest capsid protein cements and stabilizes Kaposi's sarcoma-associated herpesvirus capsid.

Authors:  Xinghong Dai; Danyang Gong; Yuchen Xiao; Ting-Ting Wu; Ren Sun; Z Hong Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

2.  Structure of a headful DNA-packaging bacterial virus at 2.9 Å resolution by electron cryo-microscopy.

Authors:  Haiyan Zhao; Kunpeng Li; Anna Y Lynn; Keith E Aron; Guimei Yu; Wen Jiang; Liang Tang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-20       Impact factor: 11.205

Review 3.  Nature's favorite building block: Deciphering folding and capsid assembly of proteins with the HK97-fold.

Authors:  Margaret M Suhanovsky; Carolyn M Teschke
Journal:  Virology       Date:  2015-04-08       Impact factor: 3.616

4.  Capsid Structure of Anabaena Cyanophage A-1(L).

Authors:  Ning Cui; Feng Yang; Jun-Tao Zhang; Hui Sun; Yu Chen; Rong-Cheng Yu; Zhi-Peng Chen; Yong-Liang Jiang; Shu-Jing Han; Xudong Xu; Qiong Li; Cong-Zhao Zhou
Journal:  J Virol       Date:  2021-09-22       Impact factor: 5.103

5.  Near-atomic cryo-electron microscopy structures of varicella-zoster virus capsids.

Authors:  Wei Wang; Qingbing Zheng; Dequan Pan; Hai Yu; Wenkun Fu; Jian Liu; Maozhou He; Rui Zhu; Yuze Cai; Yang Huang; Zhenghui Zha; Zhenqin Chen; Xiangzhong Ye; Jinle Han; Yuqiong Que; Ting Wu; Jun Zhang; Shaowei Li; Hua Zhu; Z Hong Zhou; Tong Cheng; Ningshao Xia
Journal:  Nat Microbiol       Date:  2020-09-07       Impact factor: 17.745

6.  Structure and mutagenesis reveal essential capsid protein interactions for KSHV replication.

Authors:  Xinghong Dai; Danyang Gong; Hanyoung Lim; Jonathan Jih; Ting-Ting Wu; Ren Sun; Z Hong Zhou
Journal:  Nature       Date:  2018-01-17       Impact factor: 49.962

7.  Extensive subunit contacts underpin herpesvirus capsid stability and interior-to-exterior allostery.

Authors:  Alexis Huet; Alexander M Makhov; Jamie B Huffman; Matthijn Vos; Fred L Homa; James F Conway
Journal:  Nat Struct Mol Biol       Date:  2016-04-25       Impact factor: 15.369

8.  Protein chainmail variants in dsDNA viruses.

Authors:  Z Hong Zhou; Joshua Chiou
Journal:  AIMS Biophys       Date:  2015-06-17

9.  A putative ATPase mediates RNA transcription and capping in a dsRNA virus.

Authors:  Xuekui Yu; Jiansen Jiang; Jingchen Sun; Z Hong Zhou
Journal:  Elife       Date:  2015-08-04       Impact factor: 8.140

10.  Subassemblies and asymmetry in assembly of herpes simplex virus procapsid.

Authors:  Anastasia A Aksyuk; William W Newcomb; Naiqian Cheng; Dennis C Winkler; Juan Fontana; J Bernard Heymann; Alasdair C Steven
Journal:  MBio       Date:  2015-10-06       Impact factor: 7.867

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