Literature DB >> 23827137

Structure of the pseudorabies virus capsid: comparison with herpes simplex virus type 1 and differential binding of essential minor proteins.

F L Homa1, J B Huffman, K Toropova, H R Lopez, A M Makhov, J F Conway.   

Abstract

The structure of pseudorabies virus (PRV) capsids isolated from the nucleus of infected cells and from PRV virions was determined by cryo-electron microscopy (cryo-EM) and compared to herpes simplex virus type 1 (HSV-1) capsids. PRV capsid structures closely resemble those of HSV-1, including distribution of the capsid vertex specific component (CVSC) of HSV-1, which is a heterodimer of the pUL17 and pUL25 proteins. Occupancy of CVSC on all PRV capsids is near 100%, compared to ~50% reported for HSV-1 C-capsids and 25% or less that we measure for HSV-1 A- and B-capsids. A PRV mutant lacking pUL25 does not produce C-capsids and lacks visible CVSC density in the cryo-EM-based reconstruction. A reconstruction of PRV capsids in which green fluorescent protein was fused within the N-terminus of pUL25 confirmed previous studies with a similar HSV-1 capsid mutant localizing pUL25 to the CVSC density region that is distal to the penton. However, comparison of the CVSC density in a 9-Å-resolution PRV C-capsid map with the available crystal structure of HSV-1 pUL25 failed to find a satisfactory fit, suggesting either a different fold for PRV pUL25 or a capsid-bound conformation for pUL25 that does not match the X-ray model determined from protein crystallized in solution. The PRV capsid imaged within virions closely resembles C-capsids with the addition of weak but significant density shrouding the pentons that we attribute to tegument proteins. Our results demonstrate significant structure conservation between the PRV and HSV capsids.
© 2013 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  BAC; CVSC; GFP; HSV-1; MS; PDB; PRV; Protein Data Bank; bacterial artificial chromosome; capsid vertex specific component; cryo-EM; cryo-electron microscopy; double-stranded DNA; dsDNA; green fluorescent protein; herpes simplex virus type 1; mass spectrometry; pUL17; pUL25; pseudorabies virus

Mesh:

Substances:

Year:  2013        PMID: 23827137      PMCID: PMC3779361          DOI: 10.1016/j.jmb.2013.06.034

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  53 in total

1.  Capsid assembly and DNA packaging in herpes simplex virus.

Authors: 
Journal:  Rev Med Virol       Date:  1997-07       Impact factor: 6.989

2.  Methods for reconstructing density maps of "single" particles from cryoelectron micrographs to subnanometer resolution.

Authors:  J F Conway; A C Steven
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

3.  The herpes simplex virus 1 UL17 protein is the second constituent of the capsid vertex-specific component required for DNA packaging and retention.

Authors:  Katerina Toropova; Jamie B Huffman; Fred L Homa; James F Conway
Journal:  J Virol       Date:  2011-06-01       Impact factor: 5.103

4.  Structure and polymorphism of the UL6 portal protein of herpes simplex virus type 1.

Authors:  Benes L Trus; Naiqian Cheng; William W Newcomb; Fred L Homa; Jay C Brown; Alasdair C Steven
Journal:  J Virol       Date:  2004-11       Impact factor: 5.103

5.  Biochemical studies of the maturation of herpesvirus nucleocapsid species.

Authors:  M L Perdue; J C Cohen; C C Randall; D J O'Callaghan
Journal:  Virology       Date:  1976-10-01       Impact factor: 3.616

6.  Role of the UL25 protein in herpes simplex virus DNA encapsidation.

Authors:  Shelley K Cockrell; Minerva E Sanchez; Angela Erazo; Fred L Homa
Journal:  J Virol       Date:  2008-10-22       Impact factor: 5.103

7.  Structure of the herpes simplex virus capsid: peptide A862-H880 of the major capsid protein is displayed on the rim of the capsomer protrusions.

Authors:  J V Spencer; B L Trus; F P Booy; A C Steven; W W Newcomb; J C Brown
Journal:  Virology       Date:  1997-02-17       Impact factor: 3.616

8.  The capsid and tegument of the alphaherpesviruses are linked by an interaction between the UL25 and VP1/2 proteins.

Authors:  Kelly Elizabeth Coller; Joy I-Hsuan Lee; Aki Ueda; Gregory Allan Smith
Journal:  J Virol       Date:  2007-08-22       Impact factor: 5.103

9.  Partial functional complementation of a pseudorabies virus UL25 deletion mutant by herpes simplex virus type 1 pUL25 indicates overlapping functions of alphaherpesvirus pUL25 proteins.

Authors:  Jana Kuhn; Tobias Leege; Barbara G Klupp; Harald Granzow; Walter Fuchs; Thomas C Mettenleiter
Journal:  J Virol       Date:  2008-04-09       Impact factor: 5.103

10.  Assembly of VP26 in herpes simplex virus-1 inferred from structures of wild-type and recombinant capsids.

Authors:  Z H Zhou; J He; J Jakana; J D Tatman; F J Rixon; W Chiu
Journal:  Nat Struct Biol       Date:  1995-11
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  38 in total

1.  Structure of the herpes simplex virus 1 capsid with associated tegument protein complexes.

Authors:  Xinghong Dai; Z Hong Zhou
Journal:  Science       Date:  2018-04-05       Impact factor: 47.728

2.  CryoEM and mutagenesis reveal that the smallest capsid protein cements and stabilizes Kaposi's sarcoma-associated herpesvirus capsid.

Authors:  Xinghong Dai; Danyang Gong; Yuchen Xiao; Ting-Ting Wu; Ren Sun; Z Hong Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

3.  Conservation and Divergence of the I-Domain Inserted into the Ubiquitous HK97 Coat Protein Fold in P22-Like Bacteriophages.

Authors:  Therese N Tripler; Anne R Kaplan; Andrei T Alexandrescu; Carolyn M Teschke
Journal:  J Virol       Date:  2019-04-17       Impact factor: 5.103

4.  Vertex-Specific Proteins pUL17 and pUL25 Mechanically Reinforce Herpes Simplex Virus Capsids.

Authors:  Joost Snijder; Kerstin Radtke; Fenja Anderson; Luella Scholtes; Eleonora Corradini; Joel Baines; Albert J R Heck; Gijs J L Wuite; Beate Sodeik; Wouter H Roos
Journal:  J Virol       Date:  2017-05-26       Impact factor: 5.103

Review 5.  Herpesvirus Capsid Assembly and DNA Packaging.

Authors:  Jason D Heming; James F Conway; Fred L Homa
Journal:  Adv Anat Embryol Cell Biol       Date:  2017       Impact factor: 1.231

Review 6.  Assembly and Egress of an Alphaherpesvirus Clockwork.

Authors:  Gregory A Smith
Journal:  Adv Anat Embryol Cell Biol       Date:  2017       Impact factor: 1.231

7.  A virus capsid-like nanocompartment that stores iron and protects bacteria from oxidative stress.

Authors:  Colleen A McHugh; Juan Fontana; Daniel Nemecek; Naiqian Cheng; Anastasia A Aksyuk; J Bernard Heymann; Dennis C Winkler; Alan S Lam; Joseph S Wall; Alasdair C Steven; Egbert Hoiczyk
Journal:  EMBO J       Date:  2014-07-14       Impact factor: 11.598

8.  Highly acidic C-terminal region of cytomegalovirus pUL96 determines its functions during virus maturation independently of a direct pp150 interaction.

Authors:  Teal M Brechtel; Edward S Mocarski; Ritesh Tandon
Journal:  J Virol       Date:  2014-02-05       Impact factor: 5.103

9.  Organization of capsid-associated tegument components in Kaposi's sarcoma-associated herpesvirus.

Authors:  Xinghong Dai; Danyang Gong; Ting-Ting Wu; Ren Sun; Z Hong Zhou
Journal:  J Virol       Date:  2014-08-20       Impact factor: 5.103

Review 10.  Investigating the biology of alpha herpesviruses with MS-based proteomics.

Authors:  Esteban A Engel; Ren Song; Orkide O Koyuncu; Lynn W Enquist
Journal:  Proteomics       Date:  2015-05-15       Impact factor: 3.984

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