Literature DB >> 25215885

The structural biology of phenazine biosynthesis.

Wulf Blankenfeldt1, James F Parsons2.   

Abstract

The phenazines are a class of over 150 nitrogen-containing aromatic compounds of bacterial and archeal origin. Their redox properties not only explain their activity as broad-specificity antibiotics and virulence factors but also enable them to function as respiratory pigments, thus extending their importance to the primary metabolism of phenazine-producing species. Despite their discovery in the mid-19th century, the molecular mechanisms behind their biosynthesis have only been unraveled in the last decade. Here, we review the contribution of structural biology that has led to our current understanding of phenazine biosynthesis.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 25215885      PMCID: PMC4268259          DOI: 10.1016/j.sbi.2014.08.013

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  43 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Phenazine biosynthesis in Pseudomonas fluorescens: branchpoint from the primary shikimate biosynthetic pathway and role of phenazine-1,6-dicarboxylic acid.

Authors:  M McDonald; D V Mavrodi; L S Thomashow; H G Floss
Journal:  J Am Chem Soc       Date:  2001-09-26       Impact factor: 15.419

3.  The structures of anthranilate synthase of Serratia marcescens crystallized in the presence of (i) its substrates, chorismate and glutamine, and a product, glutamate, and (ii) its end-product inhibitor, L-tryptophan.

Authors:  G Spraggon; C Kim; X Nguyen-Huu; M C Yee; C Yanofsky; S E Mills
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-22       Impact factor: 11.205

4.  Clinical outcome after early Pseudomonas aeruginosa infection in cystic fibrosis.

Authors:  G M Nixon; D S Armstrong; R Carzino; J B Carlin; A Olinsky; C F Robertson; K Grimwood
Journal:  J Pediatr       Date:  2001-05       Impact factor: 4.406

5.  The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea.

Authors:  Uwe Deppenmeier; Andre Johann; Thomas Hartsch; Rainer Merkl; Ruth A Schmitz; Rosa Martinez-Arias; Anke Henne; Arnim Wiezer; Sebastian Bäumer; Carsten Jacobi; Holger Brüggemann; Tanja Lienard; Andreas Christmann; Mechthild Bömeke; Silke Steckel; Anamitra Bhattacharyya; Athanasios Lykidis; Ross Overbeek; Hans-Peter Klenk; Robert P Gunsalus; Hans-Joachim Fritz; Gerhard Gottschalk
Journal:  J Mol Microbiol Biotechnol       Date:  2002-07

6.  Structure and function of the phenazine biosynthesis protein PhzF from Pseudomonas fluorescens 2-79.

Authors:  James F Parsons; Fenhong Song; Lisa Parsons; Kelly Calabrese; Edward Eisenstein; Jane E Ladner
Journal:  Biochemistry       Date:  2004-10-05       Impact factor: 3.162

7.  Characterization of a novel phenazine antibiotic gene cluster in Erwinia herbicola Eh1087.

Authors:  Stephen R Giddens; Yunjiang Feng; H Khris Mahanty
Journal:  Mol Microbiol       Date:  2002-08       Impact factor: 3.501

8.  Structure and mechanism of Pseudomonas aeruginosa PhzD, an isochorismatase from the phenazine biosynthetic pathway.

Authors:  James F Parsons; Kelly Calabrese; Edward Eisenstein; Jane E Ladner
Journal:  Biochemistry       Date:  2003-05-20       Impact factor: 3.162

9.  Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis.

Authors:  Ningna Xu; Ekta Gayanji Ahuja; Petra Janning; Dmitri Valeryevich Mavrodi; Linda S Thomashow; Wulf Blankenfeldt
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-07-13

10.  Pseudomonas aeruginosa pyocyanin is critical for lung infection in mice.

Authors:  Gee W Lau; Huimin Ran; Fansheng Kong; Daniel J Hassett; Dimitri Mavrodi
Journal:  Infect Immun       Date:  2004-07       Impact factor: 3.441

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  24 in total

Review 1.  The Colorful World of Extracellular Electron Shuttles.

Authors:  Nathaniel R Glasser; Scott H Saunders; Dianne K Newman
Journal:  Annu Rev Microbiol       Date:  2017-07-21       Impact factor: 15.500

2.  Baraphenazines A-G, Divergent Fused Phenazine-Based Metabolites from a Himalayan Streptomyces.

Authors:  Xiachang Wang; Muhammad Abbas; Yinan Zhang; Sherif I Elshahawi; Larissa V Ponomareva; Zheng Cui; Steven G Van Lanen; Imran Sajid; S Randal Voss; Khaled A Shaaban; Jon S Thorson
Journal:  J Nat Prod       Date:  2019-05-22       Impact factor: 4.050

3.  Refactoring the Cryptic Streptophenazine Biosynthetic Gene Cluster Unites Phenazine, Polyketide, and Nonribosomal Peptide Biochemistry.

Authors:  Katherine D Bauman; Jie Li; Kazuya Murata; Simone M Mantovani; Samira Dahesh; Victor Nizet; Hanna Luhavaya; Bradley S Moore
Journal:  Cell Chem Biol       Date:  2019-03-07       Impact factor: 8.116

4.  An integrated workflow for phenazine-modifying enzyme characterization.

Authors:  R Cameron Coates; Benjamin P Bowen; Ernst Oberortner; Linda Thomashow; Michalis Hadjithomas; Zhiying Zhao; Jing Ke; Leslie Silva; Katherine Louie; Gaoyan Wang; David Robinson; Angela Tarver; Matthew Hamilton; Andrea Lubbe; Meghan Feltcher; Jeffery L Dangl; Amrita Pati; David Weller; Trent R Northen; Jan-Fang Cheng; Nigel J Mouncey; Samuel Deutsch; Yasuo Yoshikuni
Journal:  J Ind Microbiol Biotechnol       Date:  2018-03-15       Impact factor: 3.346

Review 5.  Natural products from anaerobes.

Authors:  Jeffrey S Li; Colin Charles Barber; Wenjun Zhang
Journal:  J Ind Microbiol Biotechnol       Date:  2018-10-03       Impact factor: 3.346

6.  Genome Sequence and Antifungal Activity of Two Niche-Sharing Pseudomonas protegens Related Strains Isolated from Hydroponics.

Authors:  Cesare Polano; Marta Martini; Francesco Savian; Serena Moruzzi; Paolo Ermacora; Giuseppe Firrao
Journal:  Microb Ecol       Date:  2018-08-07       Impact factor: 4.552

7.  Antibiotic Adjuvant Activity Revealed in a Photoaffinity Approach to Determine the Molecular Target of Antipyocyanin Compounds.

Authors:  Zinan Zhang; Dominic Ortega; Anthony Rush; Lauren R Blankenship; Zi Jun Cheng; Rebecca E Moore; Minh L N Tran; Lucero G Sandoval; Kareem Aboulhosn; Seiichiro Watanabe; Kendra S Cortez; David H Perlman; Martin F Semmelhack; Laura C Miller Conrad
Journal:  ACS Infect Dis       Date:  2021-02-15       Impact factor: 5.084

8.  Synthesis and biological evaluation of thiazolidinedione derivatives with high ligand efficiency to P. aeruginosa PhzS.

Authors:  Thamires Quadros Froes; Bianca Trindade Chaves; Marina Sena Mendes; Rafael Matos Ximenes; Ivanildo Mangueira da Silva; Priscila Brandão Gomes da Silva; Julianna Ferreira Cavalcanti de Albuquerque; Marcelo Santos Castilho
Journal:  J Enzyme Inhib Med Chem       Date:  2021-12       Impact factor: 5.051

9.  iTRAQ-based quantitative proteomic analysis reveals potential factors associated with the enhancement of phenazine-1-carboxamide production in Pseudomonas chlororaphis P3.

Authors:  Xue-Jie Jin; Hua-Song Peng; Hong-Bo Hu; Xian-Qing Huang; Wei Wang; Xue-Hong Zhang
Journal:  Sci Rep       Date:  2016-06-07       Impact factor: 4.379

10.  Elucidation of Enzymatic Mechanism of Phenazine Biosynthetic Protein PhzF Using QM/MM and MD Simulations.

Authors:  Fei Liu; Yi-Lei Zhao; Xiaolei Wang; Hongbo Hu; Huasong Peng; Wei Wang; Jing-Fang Wang; Xuehong Zhang
Journal:  PLoS One       Date:  2015-09-28       Impact factor: 3.240

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