The concept of a double-bonded pancake bonding mechanism is introduced to explain the extremely short π-π stacking contacts in dimers of dithiatriazines. While ordinary single pancake bonds occur between radicals and already display significantly shorter interatomic distances in comparison to van der Waals (vdW) contacts, the double-bonded pancake dimer is based on diradicaloid or antiaromatic molecules and exhibits even shorter and stronger intermolecular bonds that breach into the range of extremely stretched single bonds in terms of bond distances and binding energies. These properties give rise to promising possibilities in the design of new materials with high electrical conductivity and for the field of spintronics. The analysis of the double pancake bond is based on cutting edge electron correlation theory combining multireference (nondynamical) effects and dispersion (dynamical) contributions in a balanced way providing accurate interaction energies and distributions of unpaired spins. It is also shown that the present examples do not stand isolated but that similar mechanisms operate in several analogous nonradical molecular systems to form double-bonded π-stacking pancake dimers. We report on the amazing properties of a new type of stacking interaction mechanism between π conjugated molecules in the form of a "double pancake bond" which breaks the record for short intermolecular distances and provides formidable strength for some π-π stacking interactions.
The concept of a double-bonded pancake bonding mechanism is introduced to explain the extremely short π-π stacking contacts in dimers of dithiatriazines. While ordinary single pancake bonds occur between radicals and already display significantly shorter interatomic distances in comparison to van der Waals (vdW) contacts, the double-bonded pancake dimer is based on diradicaloid or antiaromatic molecules and exhibits even shorter and stronger intermolecular bonds that breach into the range of extremely stretched single bonds in terms of bond distances and binding energies. These properties give rise to promising possibilities in the design of new materials with high electrical conductivity and for the field of spintronics. The analysis of the double pancake bond is based on cutting edge electron correlation theory combining multireference (nondynamical) effects and dispersion (dynamical) contributions in a balanced way providing accurate interaction energies and distributions of unpaired spins. It is also shown that the present examples do not stand isolated but that similar mechanisms operate in several analogous nonradical molecular systems to form double-bonded π-stacking pancake dimers. We report on the amazing properties of a new type of stacking interaction mechanism between π conjugated molecules in the form of a "double pancake bond" which breaks the record for short intermolecular distances and provides formidable strength for some π-π stacking interactions.
π-Stacking
in radical dimers, some of which are illustrated
in Chart 1 in the form of the constituent monomers,
is responsible for the formation of a very interesting class of chemical
compounds which display favored packing geometries as described by
the maximum multicenter overlap principle between neighboring molecules.[1] This preferred orientation is primarily due to
the energy lowering of the singly occupied molecular orbital (SOMO)
of the radical as it overlaps with its neighbor. This SOMO–SOMO
stabilization can be rationalized by the simple molecular orbital
(MO) diagram shown in Chart 2a in which the
bonding highest occupied molecular orbital (HOMO) is doubly occupied.
For example, for the prototypical phenalenyl (PHY, 1)
dimer 1, the efficient π–π
overlap provides the driving force for the stabilization of the dimer[2] which is responsible for contact distances significantly
shorter and interaction energies larger than those for typical van
der Waals (vdW) interactions.[3−8] The term “pancake bonding” has been suggested for
this type of bonding.[9,10] A major motivation in making
and understanding these π-stacking pancake interactions originates
in the quest to make new molecular materials with high electrical
conductivity[2] and for spintronics.[11] A crucial condition for the suitability of π-stacked
molecules for such purposes is a strong overlap and thus a strong
interaction and a short intermolecular bonding distance between the
stacked subsystems. High electrical conductivities have been achieved
for systems with various derivatives of 1, 2, and other π-stacking materials.[2,12] However, there
is a strong need to push the limits of pancake interactions to even
shorter distances and stronger interactions in order to offer new
opportunities for materials design.
(a) Molecular Orbital Diagram for Single Pancake-Bonded Dimers;
(b)
Molecular Orbital Diagram for Double Pancake-Bonded Dimers Based on
a Triplet Ground State of the Monomer; (c) Molecular Orbital Diagram
for Double Pancake-Bonded Dimer Based on a Singlet Diradicaloid Ground
State of the Monomer with a Low HOMO–LUMO Gapa
1–3 form single-bonded pancake dimers; 4 forms
double-bonded pancake dimers.Therefore, is
there a possibility to create even stronger pancake
bonds and more attractive interactions? In fact, the answer is yes
as the dimer orbital diagrams, shown in Chart 2b or 2c, demonstrate. They are based on a
monomer with a triplet or a singlet diradicaloid ground state with
a low-lying triplet state in the latter case in combination with an
antiaromatic electron count (8π) and antiaromaticcharacter.[13] If such a situation exists, a double pancake
bonding could arise as a four electron/multicenter (4e/mc) bonding
interaction with a formal bond order pMO of 2 since two bonding orbitals are doubly occupied. In general
we compute the bond order pMO at the MO
diagram level aswhere Nbind is the number
of electrons in the bonding orbitals and Nanti is the number of electrons in antibonding
orbitals.The formal bond order according
to eq 1 is 1 for 1, 2, and 3 (single-bonded pancake)
and 2 for 4 (double-bonded
pancake).The (4e/mc) bond would lead to a
significant improvement in terms
of the interaction strength in contrast to the formal bond order of
1 for 1 as indicated by Chart 2. Antiaromaticcompounds are usually characterized
by low stability which makes the search for appropriate candidates
for the double pancake bond difficult. Nevertheless, appropriate compounds
should exist. A good example is given in the Cambridge Structural
Database, CSD,[14] in the form of the phenyl
derivative[15] and the 4-chlorophenyl derivative[16] of 1,3,2,4,6-dithiatriazine, 4,
where the phenyl and 4-chlorophenyl have been replaced by H. It will
be compared to an analogous stable 7π-electrons radical, 1,2,4,6-thiatriazine,[17]3, that forms a traditional 2e/mc
bonded pancake bond. 1,3,2,4,6-Dithiatriazine (4) is
a neutral molecule with 8π-electrons which forms a very short
pancake bonded dimer according to its crystal structure.[15]States are designated as S
for singlet, T for triplet, and Q for quintet.Can the 1,3,2,4,6-dithiatriazine dimer really be viewed as an example
for the double pancake bond, and, if so, what can we learn from it
for the construction of other and possibly better examples? To answer
these questions from a theoretical point of view in a thorough way
one has to go well beyond the simple MO schemes presented so far.
It is crucial to understand the subtle interplay of two kinds of electron
correlation effects which make these π-stacking interactions
so challenging to understand and design. On one side there is the
quasi-degeneracy of the HOMO and LUMO calling for multireference methods
for an adequate description whereas on the other side dynamical correlation
effects are essential for the description of vdW interactions.It is the purpose of this contribution to resolve the question
of the energetic feasibility of a double pancake bond using the high-level
multireference average quadraticcoupled cluster, MR-AQCC, theory.[18] This level of theory provides an excellent approach
to the simultaneous treatment of static and dynamic electron correlation.
It has been successfully used previously in interpreting the bonding
characteristics of the phenalenyl dimer[19] and the TCNE– anion dimer,[3] two prototypical examples of pancake bonding. The multireference
starting point assures that the multiradical character is included
in the theory from the outset, and the approximate coupled cluster
level assures that the millions of configurations necessary for the
dispersion interaction are well accounted for.[20−22]
Methods and Models
Computational
Details
Complete active
space self-consistent field (CASSCF)[23] and
multireference averaged coupled cluster MR-AQCC[18]/6-311++G(2d,2p)[24] calculations
including full geometry optimizations were carried out on the π
dimers 3 and 4. The electronic state configurations of these
two π dimers with C2 symmetry are illustrated in Figure 1. The CASSCF(2,2) (32) and CASSCF(4,4) (4) calculations have been performed
using the bonding and antibonding orbitals of the SOMOs in 3 and 4 as the active orbital space for 3 and 4 π dimers, respectively. Molecular orbitals (MOs) created by
the CASSCF method were used in the MR-AQCCcalculations including
gradients with the same active orbital spaces as used in the CASSCF
calculations. The total space of configuration state functions (CSFs)
was constructed by applying single and double excitations from valence
orbitals to all virtual orbitals for all reference CSFs and imposing
generalized interacting space restrictions.[25] The 1s core orbitals of the C, N, and S atoms and 2s and 2p orbitals
of the S atoms were frozen throughout all MR-AQCCcalculations (additionally,
eight low-lying occupied orbitals were frozen in 4). The analysis of the radical character of the
complexes was performed by analyzing (i) the natural orbitals (NOs)
of the one-particle MR-AQCC density matrix and (ii) the effectively
unpaired density using the nonlinear formula of Head-Gordon.[32] Atomic values are based on a Mulliken analysis
for the unpaired density. The COLUMBUS suite of programs was used
for the MR-AQCC and CASSCF computations.[26] In addition to the single state CASSCF(4,4) approach for the singlet
and quintet states, state averaged CASSCF calculations have been performed
on the triplet state dominated by two main configurations: Φ1 = |···a12b11a21b20| and
Φ2= |···b12a11b21a20|. Density functional theory (DFT) was used to supplement the MR-AQCCcalculations for three candidate molecules that are promising for
double pancake bonding. Substitution effects were assessed by DFT
calculations.
Figure 1
Illustration of the bonding and antibonding combinations
of the
two and four SOMOs for 3 (a)
and 4 (b), respectively. D is
the short intermolecular sulfur–sulfur contact, DS–S.
Illustration of the bonding and antibonding combinations
of the
two and four SOMOs for 3 (a)
and 4 (b), respectively. D is
the short intermolecular sulfur–sulfurcontact, DS–S.Figures 2 and S1 compare the crystallographic data
for the two experimentally observed
derivatives of the double bonded pancake dimer 4. The phenyl and chlorophenyl substitution has
little effect on the geometry of the dithiatriazinecore validating
the use of 4 as a good model
for these experimentally observed systems.
Figure 2
Structures of two substituted
dithiatriazine (HCN3S2)2 π
dimers indicate close similarity in
their structures. These dimers were excised from their respective
crystal structures: the phenyl derivative[15] (5) and the 4-chlorophenyl
derivative[16] (6) are derivatives of 1,3,2,4,6-dithiatriazine, 4.
Structures of two substituted
dithiatriazine (HCN3S2)2 π
dimers indicate close similarity in
their structures. These dimers were excised from their respective
crystal structures: the phenyl derivative[15] (5) and the 4-chlorophenyl
derivative[16] (6) are derivatives of 1,3,2,4,6-dithiatriazine, 4.For the cationic dimers the Coulomb
energy was estimated by using
the following formula based on the approximate Q atomiccharges. We use Q values based on electrostatic potentials
(ESP) following the Hu–Lu–Yang charge fitting method
(HLY scheme)[27] in eq 2(28)in which C is taken as the
reference Coulomb energy at D =
10.0 Å.The interaction energy Eint(D) of the dimer with intermolecular separation D between the monomers is computed at the MR-AQCC level,
as the energy
of the complex with reference to the energy at a separation of D = 10.0 Å where the overlap is sufficiently close
to zero:Further computational details
are given in the Supporting Information section.
Approximate Separation
of the Interaction
Energy: vdW and Pancake Bonding Components
The separation
of the vdW and the attractive SOMO–SOMO interaction is essential
for the analysis of the interaction energy, Eint(D). It is written as the sum of the specific
pancake π–π bonding SOMO–SOMO interaction
(ESOMO–SOMO) and the van der Waals
(EvdW) term[3,6,7]The vdW
term includes dispersion,
Pauli repulsion, and electrostatic interactions. EvdW is approximated by the interaction energy EintHS.computed for the high-spin
(HS) state taken at the same distance D since in
this case bonding and antibonding interactions derived from the SOMO
orbitals approximately cancel and pMO =
0 (eq 1).[3,7,19]According to Chart 3, for 42 the singlet (S), triplet (T), and quintet (Q) states
contain double, single, and no pancake bond character with formal
bonders pMO equal to 2, 1, and 0, respectively
(eq 1). The singlet states of 1, 2, and 3 all possess a bond
order p of 1. The SOMO–SOMO interaction term
for both the single and double pancake bond, respectively, is then
approximated as follows:
Chart 3
MO Diagrams for the Dimers of Various States
of 1, 2, 3, and 4a
LS labels the respective low spin state which
is only singlet for 12, 22, and 32 but can be singlet or triplet
for 42. The high-spin state is triplet in
the former case and quintet
in the latter. A version of this approximation restricted to LS =
singlet and HS = triplet has been used by Mota et al.[7] for the analysis of the interaction energy of pancake bonded
dimers of 1 and 2 and has been recently
validated for both of these systems within the context of the MR-AQCC
level of theory.[3,19] One result, relevant for this study, was that the vdW term becomes
repulsive at the short contacts typical for pancake bonds. According
to this analysis, the pancake contacts shorter than the typical vdW
distance result from the large negative (bonding) ESOMO–SOMO pancake interaction.
Results and Discussion
Computed Interaction Energies
and Its Components
of 3 and 4
Total energy minimization of the dimer
structures at the MR-AQCC level followed by rigid scans as a function
of the shortest sulfur···sulfur distance (DS–S) were performed for the π-stacking pancake
dimers 3 and 4. The resulting interaction energies are presented
in Figure 3a and 3b,
while the derived ESOMO–SOMO pancake
bonding energy terms based on eq 6 are shown
Figure 3c.
Figure 3
Potential energy scans for (a) the singlet
and triplet states of 3 and
(b) the singlet, triplet, and
quintet states of 4. The SOMO–SOMO
interaction energies are represented in (c) and are defined in the
inset according to eq 6. Computations refer
to C2 symmetry using
an MR-AQCC/6-311++G(2d,2p) level of theory.
Potential energy scans for (a) the singlet
and triplet states of 3 and
(b) the singlet, triplet, and
quintet states of 4. The SOMO–SOMO
interaction energies are represented in (c) and are defined in the
inset according to eq 6. Computations refer
to C2 symmetry using
an MR-AQCC/6-311++G(2d,2p) level of theory.The fully optimized geometries and the respective interaction
energies
are discussed first; key data are collected in Table 1. The singlet minimum of the single pancake bonded 3 shows an interaction energy of −7.0
kcal/mol at DS–S = 2.870 Å.
This distance is much shorter than the vdW distance of 3.60 Å[29] and is clearly indicative of pancake bonding.
The experimentally observed contact for the dimers of the diphenyl
substituted 3 in the crystal is 2.677 Å (CSD refcode
CUVTAO).[17] The agreement between computation
and experiment is good, given the missing steric repulsions due to
the phenyls in the model compound used and due to intermolecular interactions
in the crystal also not included in the calculations. The interaction
energy for the triplet state of 3 at the equilibrium geometry of the singlet (DS–S = 2.870 Å) is repulsive with +11.8 kcal/mol,
a value which is used to approximate EvdW at this distance according to eq 5. The SOMO–SOMO
binding energy of 3 is −18.8
kcal/mol at the equilibrium geometry computed from eq 6 and represents a significant attraction. On the other hand,
the modest attraction of −1.8 kcal/mol at the minimum distance DS–S of 4.0 Å for the triplet state
of 3 corresponds well to what
is expected of pure vdW interactions in terms of both the location
and depth of the minimum.
Table 1
Computeda Interaction
Energies, Eint, and Its Components, EvdW and ESOMO–SOMO
speciesb
Dc (Å)
Eint (kcal/mol)
EvdW (kcal/mol)
ESOMO–SOMO (kcal/mol)
12(S)
3.104d
–11.5
5.7
–17.2
12(T)
3.676e
–3.3
–3.3
0.0
12(T)
3.104f
5.7
5.7
0.0
22(S)
2.735d
–10.1
13.0
–23.1
22(T)
3.820e
–2.7
–2.7
0.0
22(T)
2.735f
13.0
13.0
0.0
32(S)
2.870d
–7.0
11.8
–18.8
32(T)
4.0g
–1.8
–1.8
0.0
32(T)
2.870f
11.8
11.8
0.0
42(S)
2.571d
–27.7
62.5
–90.2
42(T)
3.6g
–2.9
–0.4
–2.5
42(Q)
2.571f
62.5
62.5
0.0
42(Q)
3.6g
–0.4
–0.4
0.0
42(Q)
4.1h
–1.8
–1.8
0.0
MR-AQCC/6-311++G(2d,2p)
level of
theory. Data for 1 are from
ref (19) and for 2 from ref (3).
S, T, and Q stand for singlet, triplet,
and quintet states, respectively.
D represents C–C
contacts for 1 and 2 and S–S contacts for the rest of
the dimers.
Optimized geometry
of the singlet
(S) dimer.
Optimized geometry
of the triplet
(T) dimer.
Computed high-spin
state using the
singlet ground state geometry of the dimer.
Minimum on the rigid D scan for
the triplet (T) dimer.
Minimum on the rigid D scan for
the quintet (Q) dimer.
MR-AQCC/6-311++G(2d,2p)
level of
theory. Data for 1 are from
ref (19) and for 2 from ref (3).S, T, and Q stand for singlet, triplet,
and quintet states, respectively.D represents C–Ccontacts for 1 and 2 and S–S contacts for the rest of
the dimers.Optimized geometry
of the singlet
(S) dimer.Optimized geometry
of the triplet
(T) dimer.Computed high-spin
state using the
singlet ground state geometry of the dimer.Minimum on the rigid D scan for
the triplet (T) dimer.Minimum on the rigid D scan for
the quintet (Q) dimer.Turning
to the double pancake case of 4, the singlet minimum shows a much larger interaction
energy of −27.7 kcal/mol at a remarkably short contact distance
of DS–S = 2.571 Å (Table 1). This distance is considerably shorter (by 0.3
Å) than in the radical dimer 3 discussed above and by more than 1 Å shorter than the
vdW distance of 3.60 Å.[29] The experimentally
observed DS–S distance for the
dimers of the phenyl substituted 4 in the crystal is
2.529 Å (average of two values from CSD, refcode DESSID).[15] The value in the isostructural 4-chlorophenyl
derivative dimer is 2.522 Å (average of two values from CSD,
refcode PAFLAJ)[16] which is still much longer
than the typical single S–S bond of about 2.04 Å.[16] The agreement between computation and experiment
is very good, and again the differences are largely attributable to
steric repulsions due to the two phenyls (not present in the computations)
and to intermolecular interactions in the crystal. The vdW interaction
energy computed from eq 5 using the quintet
at the equilibrium geometry of the singlet is repulsive with +62.5
kcal/mol. This very large positive value indicates that the SOMO–SOMO
interaction for the singlet with such a short distance must more than
overcome this repulsive term. The development of the SOMO–SOMO
pancake bonding energy according to eq 6 with
the intermolecular distance DS–S is shown in Figure 3c. At the equilibrium
geometry of the singlet of 4 it reaches the amazingly large attractive value of −90.2
kcal/mol. For comparison, according to Figure 3b and Table 1 the modest attraction of −1.8
kcal/mol at the minimum D = 4.1 Å of the quintet
corresponds well to what is expected of purely vdW interactions.The triplet interaction energy curve for 4 in Figure 3b shows an intermediate
behavior between that of the singlet and quintet with a minimum at
3.6 Å and an interaction energy of −2.9 kcal/mol. The
triplet state is used as a tool to connect the single- and double-bonded
pancake interactions in 4. The
bare SOMO–SOMO pancake bonding energy term for the triplet
of 4 (Figure 3c) coincides remarkably well with that of the typical pancake
bonded dimer of 3. As has been
discussed in connection with Chart 3, in the
triplet state of 4 only one
pancake bond is left over as compared to the singlet, and therefore
it agrees well with the singlet of 3, which also represents one pancake bond.The dissociation
limit of the 4 dimer yields
three degenerate states (S, T, and Q). They arise
from the coupling of the two triplet monomers as discussed in the Supporting Information section S.IV. There is
also a lower energy singlet of the monomer that shows signs of a second
order Jahn–Teller symmetry breaking.[13]
Diradical Characters and Unpaired Density
Analysis
The extent and character of unpaired density of
the complexes were analyzed by the natural orbitals (NOs) of the one-particle
MR-AQCC density matrix and the effectively unpaired electron density,[30−32] which provides a measure for the separation of an electron pair
into different spatial regions. The total number of effectively unpaired
electrons (NU) is computed with the following
formula:[32]where n refers to the i-th natural
orbital occupancy and N to the number of natural
orbitals. We have selected the nonlinear formula given in ref (32) since it reduces the relative
contributions of the n values that are close to 0 or 2 diminishing the contributions from
dynamical correlation and thus highlighting only the truly open-shell
contributions of the radical centers.The total number of effectively
unpaired electrons, NU, is displayed in
Figure 4a as a function of the S···S
contact distance (DS–S) for the
different multiplicities of 4 and the singlet state of 3. At large separations NU values around
4.28 e are obtained for 4 exceeding the expected 4.0 e because
at the MR-AQCC level, in addition to the two unpaired electrons on
each of the two monomers, dynamical correlations provide a slight
excess over 4.0 e. As the contact distance is reduced,
the singlet NU is dramatically reduced
as the electrons start to pair. At the equilibrium D = 2.571 Å the pairing is still incomplete where NU = 0.57 e indicates a remaining limited
polyradical[33] character. The triplet NU values of 3 are not shown; they are essentially constant at ∼2.4 e, representing the two unpaired electrons plus some contributions
from dynamical correlation. At large separations the singlet state
of 3 has the same number of
unpaired electrons as the triplet, which, however, in the former case
is substantially reduced as the two-electron pancake bond is being
formed. At the equilibrium geometry (D = 2.870 Å)
the NU = 0.93 e value
indicates a still existent significant diradicaloid character, typical
for such single pancake bonds.[3,34] The qualitative difference
compared to the single-bonded pancake is that the double-bonded pancake
bond is substantially shorter, and the multiradical character is reduced.
The triplet state of 4 retains
a high value of multiradical character of NU near 3.5 e at its minimum of D = 3.6 Å indicating that it is located intermediate between
the quintet and singlet in terms of electron pairing.
Figure 4
(a) Total number of effectively
unpaired electrons (NU) of 3 and 4 and (b) occupation numbers of the
frontier NOs of the singlet states of 3 and 4 as a function
of the separation distance (DS–S).
Figure 4b displays the natural orbital occupation
numbers (NOONs) for the relevant frontier orbitals of the dimers 3 and 4 shown in Figure 1. The values are nearly
equal to 1.0 at large separations as expected. All NOON values are
evolving toward 2.0 and 0.0 at a similar pace as D is reduced. However, at the respective equilibrium distance of each
molecule these values differ significantly since the DS–S distance is considerably smaller for the double-bonded 4 pancake as compared to the single-bonded 3 pancake.(a) Total number of effectively
unpaired electrons (NU) of 3 and 4 and (b) occupation numbers of the
frontier NOs of the singlet states of 3 and 4 as a function
of the separation distance (DS–S).The unpaired electron densities,
shown in Figure 5, indicate this difference
also: the radical character of
the double-bonded 4 pancake
is much smaller as compared to the single-bonded 3 case.
Figure 5
Effectively unpaired electron density (isovalue
0.002 au) and atomic
contributions for the singlets of 3 and 4. NU is the number of effectively unpaired electrons given
in parentheses indicating stronger electron pairing in 4 compared to 3.
Effectively unpaired electron density (isovalue
0.002 au) and atomiccontributions for the singlets of 3 and 4. NU is the number of effectively unpaired electrons given
in parentheses indicating stronger electron pairing in 4 compared to 3.Extending the simple integer bond
order pMO defined in eq 1, we computed a more
detailed bond order pNO based on the two
and four frontier orbital NOONs for 3 and 4, respectively,where NEBO is the number of
electrons in bonding
orbitals, NEABO is the number of electrons in the antibonding orbitals
based on the natural orbital occupancies for the two frontier orbitals
for 3 and four frontier orbitals
for 4, respectively. The pNO values obtained are 0.695 for 3 and 1.715 for 4. This reflects a major difference in the occupancies,
which mirror the much stronger and shorter pancake bonds in the π-stacking
dimer 4 compared to those in
the radical dimer 3.
Further Examples of Double Pancake Bonded
Dimers
Based on these insights we have designed three new
double pancake bonded dimers each with an even number of π-electrons.
These systems that might exhibit double pancake bonding were obtained
by substituting Se for S in 4 and substituting S+ for CH in 4, respectively, arriving in both
cases at isoelectronic 8π-electron rings. A further example
is based on the C5H5+ ring that has
a triplet ground state with D5 symmetry and exhibits an antiaromatic electron count.[35] Computational results at the MR-AQCC and UB3LYP
levels indicate that these systems exhibit very short intermolecular
π-stacking contacts as expected from double pancake bonding.
Substitution of Se for S in Dithiatriazine:
Se2N3CH with 8 π-Electrons
The
optimized geometry of a hypothetical double pancake bonded dimer using
UB3LYP/6-311++G(2d,2p) is shown in Figure 6. The UDFT geometry optimization (including UB3LYP and UM06-2X) on
the (Se2N3CH)2 π dimer (7) using the 6-311++G(2d,2p) basis
set provided strong evidence for double pancake bonding in this dimer.
The UDFT methods produced a C2 symmetry optimized geometry for the (Se2N3CH)2 dimer with intermolecular Se–Se distances
of 2.770 Å (UB3LYP) and 2.685 Å (UM06-2X). Thesecontact
values are strikingly shorter by 1.030 Å than the vdW distance
for Se···Se (3.800 Å).[36] The rest of the intermolecular distances in the (Se2N3CH)2 π dimer are similar to those of the
(S2N3CH)2 π dimer, 4. The (Se2N3CH)2 π dimer also has a large interaction energy of −27.0
kcal/mol (UB3LYP/6-311++G(2d,2p)) resulting from the perfect SOMO–SOMO
overlap, indicating that this unique Se-bearing dimer displays strong
double pancake bonding and therefore would be a good candidate for
further analysis and perhaps synthesis. The total interaction energy
is comparable to that in 4:
−27.0 indicating the overall strength of the double pancake
bonding and its ability to more than overcome vdW (Pauli) repulsion
at these extremely short contact π-stacking distances.
Figure 6
Optimized geometry
of the Se analogue of 4 with
UB3LYP/6-311++G(2d,2p).
Optimized geometry
of the Se analogue of 4 with
UB3LYP/6-311++G(2d,2p).
Substitution of S+ for CH in
Dithiatriazine: S3N3+ with 8 π-Electrons
Two low-lying local minima of the hypothetical double pancake bonded
dimer, (S3N3+)2 (8 and 9), were obtained by UB3LYP/6-311++G(2d,2p) and are shown in
Figure 7.
Figure 7
Optimized geometry of the S+ substituted analogue of 4,
(S3N3+)2. Two configurations
are shown with UB3LYP/6-311++G(2d,2p).
Optimized geometry of the S+ substituted analogue of 4,
(S3N3+)2. Two configurations
are shown with UB3LYP/6-311++G(2d,2p).The 8 configuration
with
pecfect overlap was further considered by rigid scan calculations
at the MR-AQCC(4,4)/6-311++G(2d,2p) level starting with the UB3LYP/6-311++G(2d,2p)
dimer optimized geometry. As shown in Figure 8, the total energy curve (Eint) indicated
that there is a metastable minimum with a significant barrier to dissociation
into two S3N3+ fragments, which arises
from strong cation–cation Coulomb repulsion. We approximated
the corrected (bare) interaction energy as the Eint – ECoul. The minimum
of this corrected interaction energy of the π dimer is −40.7
kcal/mol at about D = 2.7 Å. Furthermore, the
SOMO–SOMO interaction of 8 has been investigated by subtracting the interaction of the highest
spin state (quintet) from the interaction of the singlet state as
shown in Figure 8b. It turns out that the 8 possesses a very significant SOMO–SOMO
component in the intermolecular interactions, which is very similar
to the behavior of 4 providing
a tremendeous driving force toward establishing a double bonded π–π
stacking pancake.
Figure 8
Potential energy scans of the singlet
and quintet of the (S3N3)22+ π dimer with D3 symmetry (8) as a function
of the S···S
distance (DS–S) computed at the
MR-AQCC(4,4)/6-311++G(2d,2p) level.
In the 8 case the S···S
contact was computed to be 0.812 Å shorter than the vdW distance
after subtracting a large Coulomb repulsion term that was approximated
using ESP based approximate point charges. The total interaction energy
after subtraction of the Coulomb repulsion is even larger than that
for 4: −27.7 kcal/mol.
The respective ESOMO−SOMO value (−87.5 kcal/mol)
and the short contacts indicate that the SOMO–SOMO bonding
interaction is very strong, and thus further examples of double pancake
bonding should be forthcoming.Potential energy scans of the singlet
and quintet of the (S3N3)22+ π dimer with D3 symmetry (8) as a function
of the S···S
distance (DS–S) computed at the
MR-AQCC(4,4)/6-311++G(2d,2p) level.
Perfluoro-cyclopentadiene Cation: C5F5+ with 4π-Electrons
C5H5+ has the right electron count
to be a candidate for double pancake bonding. It has been investigated
for its triplet ground state.[35] We turned
to the perfluoro derivative of C5H5+, because we anticipated that the use of σ-electron withdrawing
groups will facilitate pancake bond formation.[28] The optimized geometry of the hypothetical double pancake
bonded π-dimer, (C5F5+)2 (10), using UB3LYP/6-311+G(d)
is shown in Figure 9.
Figure 9
Optimized geometry of
the hypothetical double pancake bonded dimer,
(C5F5+)2.
Optimized geometry of
the hypothetical double pancake bonded dimer,
(C5F5+)2.10 exhibits
a real local
minimum with extremely short π–π stacking C–C
distances of 2.611 Å. The dimer of 10 represents the first five-member ring forming a double
pancake bonded system with two perfectly degenerate SOMO–SOMO
interaction terms. Thermodynamically, 10 is unfavorable because of (i) the strong Coulomb repulsion
and (ii) the σ dimer is much more favorable by means of cycloaddition.
We suspect that the latter mechanism is a main reason why pancake
bonded systems with rings consisting of mostly C(sp2) have
not yet been charaterized. Energy minimization of the singlet ground
state of the dimer of the perfluoro derivative of C5H5+ (10, C5F5+) showed a well-defined local minimum with overall positive
interaction energy due to the large Coulomb repulsion. These three
examples indicate that it should be possible to find further systems
that exhibit double pancake bonding.
Conclusions
It has been established for the first time through high-accuracy
quantum mechanical modeling that the π-stacking dimer of 4 can be understood as a double pancake
bonded molecular aggregate. This finding enriches the toolkit of chemical
interactions in a sensitive area connecting the weak vdW interactions
to electron pair chemical bonds. The search for shorter and stronger
pancake bonding may lead to intermolecular contacts that might breach
into the range of extremely stretched single bonds[38−40] in terms of
bond distance and binding energy. The best candidates for utilizing
this new double pancake bonding mechanism will be likely found among
π-electron rich molecules with their highest two occupied orbitals
being of π-type concomitant with either a singlet ground state
with a low-lying triplet state and diradicaloid character or π-electron
rich molecules with a triplet ground state.
Authors: Juan Casado; Paula Mayorga Burrezo; Francisco J Ramírez; Juan T López Navarrete; Saul H Lapidus; Peter W Stephens; Hoa-Lan Vo; Joel S Miller; Fernando Mota; Juan J Novoa Journal: Angew Chem Int Ed Engl Date: 2013-04-16 Impact factor: 15.336
Authors: Manjeera Mantina; Adam C Chamberlin; Rosendo Valero; Christopher J Cramer; Donald G Truhlar Journal: J Phys Chem A Date: 2009-05-14 Impact factor: 2.781