Literature DB >> 25173738

Inosine in DNA and RNA.

Ingrun Alseth1, Bjørn Dalhus2, Magnar Bjørås3.   

Abstract

Deamination of the nucleobases in DNA and RNA is a result of spontaneous hydrolysis, endogenous or environmental factors as well as deaminase enzymes. Adenosine is deaminated to inosine which is miscoding and preferentially base pairs with cytosine. In the case of DNA, this is a premutagenic event that is counteracted by DNA repair enzymes specifically engaged in recognition and removal of inosine. However, in RNA, inosine is an essential modification introduced by specialized enzymes in a highly regulated manner to generate transcriptome diversity. Defect editing is seen in various human disease including cancer, viral infections and neurological and psychiatric disorders. Enzymes catalyzing the deaminase reaction are well characterized and recently an unexpected function of Endonuclease V in RNA processing was revealed. Whereas bacterial Endonuclease V enzymes are classified as DNA repair enzymes, it appears that the mammalian enzymes are involved in processing of inosine in RNA. This yields an interesting yet unexplored, link between DNA and RNA processing. Further work is needed to gain understanding of the impact of inosine in DNA and RNA under normal physiology and disease progression.
Copyright © 2014 The Authors. Published by Elsevier Ltd.. All rights reserved.

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Year:  2014        PMID: 25173738     DOI: 10.1016/j.gde.2014.07.008

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  39 in total

1.  Genome, Epigenome, and Transcriptome Editing via Chemical Modification of Nucleobases in Living Cells.

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2.  Age-related accumulation of de novo mitochondrial mutations in mammalian oocytes and somatic tissues.

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3.  Determinants of Base-Pair Substitution Patterns Revealed by Whole-Genome Sequencing of DNA Mismatch Repair Defective Escherichia coli.

Authors:  Patricia L Foster; Brittany A Niccum; Ellen Popodi; Jesse P Townes; Heewook Lee; Wazim MohammedIsmail; Haixu Tang
Journal:  Genetics       Date:  2018-06-15       Impact factor: 4.562

Review 4.  Editing the Genome Without Double-Stranded DNA Breaks.

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Journal:  ACS Chem Biol       Date:  2017-10-09       Impact factor: 5.100

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6.  Regulation of Human Endonuclease V Activity and Relocalization to Cytoplasmic Stress Granules.

Authors:  Meh Sameen Nawaz; Erik Sebastian Vik; Natalia Berges; Cathrine Fladeby; Magnar Bjørås; Bjørn Dalhus; Ingrun Alseth
Journal:  J Biol Chem       Date:  2016-08-29       Impact factor: 5.157

Review 7.  Methods and Applications of CRISPR-Mediated Base Editing in Eukaryotic Genomes.

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Journal:  Mol Cell       Date:  2017-10-05       Impact factor: 17.970

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Review 9.  CRISPR-based genome editing through the lens of DNA repair.

Authors:  Tarun S Nambiar; Lou Baudrier; Pierre Billon; Alberto Ciccia
Journal:  Mol Cell       Date:  2022-01-20       Impact factor: 17.970

10.  Comprehensive Metabolomic Analysis Reveals Dynamic Metabolic Reprogramming in Hep3B Cells with Aflatoxin B1 Exposure.

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Journal:  Toxins (Basel)       Date:  2021-05-27       Impact factor: 4.546

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