Literature DB >> 25171409

Cross-kingdom chemical communication drives a heritable, mutually beneficial prion-based transformation of metabolism.

Daniel F Jarosz1, Jessica C S Brown2, Gordon A Walker3, Manoshi S Datta4, W Lloyd Ung5, Alex K Lancaster6, Assaf Rotem5, Amelia Chang2, Gregory A Newby2, David A Weitz7, Linda F Bisson8, Susan Lindquist9.   

Abstract

In experimental science, organisms are usually studied in isolation, but in the wild, they compete and cooperate in complex communities. We report a system for cross-kingdom communication by which bacteria heritably transform yeast metabolism. An ancient biological circuit blocks yeast from using other carbon sources in the presence of glucose. [GAR(+)], a protein-based epigenetic element, allows yeast to circumvent this "glucose repression" and use multiple carbon sources in the presence of glucose. Some bacteria secrete a chemical factor that induces [GAR(+)]. [GAR(+)] is advantageous to bacteria because yeast cells make less ethanol and is advantageous to yeast because their growth and long-term viability is improved in complex carbon sources. This cross-kingdom communication is broadly conserved, providing a compelling argument for its adaptive value. By heritably transforming growth and survival strategies in response to the selective pressures of life in a biological community, [GAR(+)] presents a unique example of Lamarckian inheritance.
Copyright © 2014 Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 25171409      PMCID: PMC4424051          DOI: 10.1016/j.cell.2014.07.025

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  45 in total

Review 1.  Prions as adaptive conduits of memory and inheritance.

Authors:  James Shorter; Susan Lindquist
Journal:  Nat Rev Genet       Date:  2005-06       Impact factor: 53.242

2.  Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis.

Authors:  E A Winzeler; D D Shoemaker; A Astromoff; H Liang; K Anderson; B Andre; R Bangham; R Benito; J D Boeke; H Bussey; A M Chu; C Connelly; K Davis; F Dietrich; S W Dow; M El Bakkoury; F Foury; S H Friend; E Gentalen; G Giaever; J H Hegemann; T Jones; M Laub; H Liao; N Liebundguth; D J Lockhart; A Lucau-Danila; M Lussier; N M'Rabet; P Menard; M Mittmann; C Pai; C Rebischung; J L Revuelta; L Riles; C J Roberts; P Ross-MacDonald; B Scherens; M Snyder; S Sookhai-Mahadeo; R K Storms; S Véronneau; M Voet; G Volckaert; T R Ward; R Wysocki; G S Yen; K Yu; K Zimmermann; P Philippsen; M Johnston; R W Davis
Journal:  Science       Date:  1999-08-06       Impact factor: 47.728

Review 3.  Feasting, fasting and fermenting. Glucose sensing in yeast and other cells.

Authors:  M Johnston
Journal:  Trends Genet       Date:  1999-01       Impact factor: 11.639

Review 4.  Function and regulation of yeast hexose transporters.

Authors:  S Ozcan; M Johnston
Journal:  Microbiol Mol Biol Rev       Date:  1999-09       Impact factor: 11.056

5.  Yeast prions [URE3] and [PSI+] are diseases.

Authors:  Toru Nakayashiki; Cletus P Kurtzman; Herman K Edskes; Reed B Wickner
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-15       Impact factor: 11.205

6.  A Pseudomonas aeruginosa quorum-sensing molecule influences Candida albicans morphology.

Authors:  Deborah A Hogan; Ashild Vik; Roberto Kolter
Journal:  Mol Microbiol       Date:  2004-12       Impact factor: 3.501

7.  Feedback control of morphogenesis in fungi by aromatic alcohols.

Authors:  Hao Chen; Gerald R Fink
Journal:  Genes Dev       Date:  2006-04-17       Impact factor: 11.361

8.  Multiple mechanisms provide rapid and stringent glucose repression of GAL gene expression in Saccharomyces cerevisiae.

Authors:  M Johnston; J S Flick; T Pexton
Journal:  Mol Cell Biol       Date:  1994-06       Impact factor: 4.272

Review 9.  Functional genomics of wine yeast Saccharomyces cerevisiae.

Authors:  Linda F Bisson; Jonathan E Karpel; Vidhya Ramakrishnan; Lucy Joseph
Journal:  Adv Food Nutr Res       Date:  2007

10.  Physiology of mutants with reduced expression of plasma membrane H+-ATPase.

Authors:  C G Vallejo; R Serrano
Journal:  Yeast       Date:  1989 Jul-Aug       Impact factor: 3.239

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  50 in total

1.  What do you mean, "epigenetic"?

Authors:  Carrie Deans; Keith A Maggert
Journal:  Genetics       Date:  2015-04       Impact factor: 4.562

2.  Metabolic Signaling and Spatial Interactions in the Oral Polymicrobial Community.

Authors:  D P Miller; Z R Fitzsimonds; R J Lamont
Journal:  J Dent Res       Date:  2019-07-29       Impact factor: 6.116

3.  Allelic variants of hereditary prions: The bimodularity principle.

Authors:  Oleg N Tikhodeyev; Oleg V Tarasov; Stanislav A Bondarev
Journal:  Prion       Date:  2017-01-02       Impact factor: 3.931

4.  High-throughput Screening for Protein-based Inheritance in S. cerevisiae.

Authors:  James S Byers; Daniel F Jarosz
Journal:  J Vis Exp       Date:  2017-08-08       Impact factor: 1.355

Review 5.  Prions, amyloids, and RNA: Pieces of a puzzle.

Authors:  Anton A Nizhnikov; Kirill S Antonets; Stanislav A Bondarev; Sergey G Inge-Vechtomov; Irina L Derkatch
Journal:  Prion       Date:  2016-05-03       Impact factor: 3.931

Review 6.  Epigenetic inheritance, prions and evolution.

Authors:  Johannes Manjrekar
Journal:  J Genet       Date:  2017-07       Impact factor: 1.166

Review 7.  More than Just a Phase: Prions at the Crossroads of Epigenetic Inheritance and Evolutionary Change.

Authors:  Anupam K Chakravarty; Daniel F Jarosz
Journal:  J Mol Biol       Date:  2018-07-19       Impact factor: 5.469

8.  Organizing biochemistry in space and time using prion-like self-assembly.

Authors:  Christopher M Jakobson; Daniel F Jarosz
Journal:  Curr Opin Syst Biol       Date:  2017-12-06

9.  Intrinsically Disordered Proteins Drive Emergence and Inheritance of Biological Traits.

Authors:  Sohini Chakrabortee; James S Byers; Sandra Jones; David M Garcia; Bhupinder Bhullar; Amelia Chang; Richard She; Laura Lee; Brayon Fremin; Susan Lindquist; Daniel F Jarosz
Journal:  Cell       Date:  2016-09-29       Impact factor: 41.582

Review 10.  A brief overview of the Swi1 prion-[SWI+].

Authors:  Dustin K Goncharoff; Zhiqiang Du; Liming Li
Journal:  FEMS Yeast Res       Date:  2018-09-01       Impact factor: 2.796

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