Literature DB >> 25160167

Towards a semantic PACS: Using Semantic Web technology to represent imaging data.

Johan Van Soest1, Tim Lustberg1, Detlef Grittner2, M Scott Marshall1, Lucas Persoon1, Bas Nijsten1, Peter Feltens2, Andre Dekker1.   

Abstract

The DICOM standard is ubiquitous within medicine. However, improved DICOM semantics would significantly enhance search operations. Furthermore, databases of current PACS systems are not flexible enough for the demands within image analysis research. In this paper, we investigated if we can use Semantic Web technology, to store and represent metadata of DICOM image files, as well as linking additional computational results to image metadata. Therefore, we developed a proof of concept containing two applications: one to store commonly used DICOM metadata in an RDF repository, and one to calculate imaging biomarkers based on DICOM images, and store the biomarker values in an RDF repository. This enabled us to search for all patients with a gross tumor volume calculated to be larger than 50 cc. We have shown that we can successfully store the DICOM metadata in an RDF repository and are refining our proof of concept with regards to volume naming, value representation, and the applications themselves.

Entities:  

Mesh:

Year:  2014        PMID: 25160167      PMCID: PMC5119276     

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  5 in total

1.  Understanding terminological systems. I: Terminology and typology.

Authors:  N F de Keizer; A Abu-Hanna; J H Zwetsloot-Schonk
Journal:  Methods Inf Med       Date:  2000-03       Impact factor: 2.176

2.  Informatics methods to enable sharing of quantitative imaging research data.

Authors:  Mia A Levy; John B Freymann; Justin S Kirby; Andriy Fedorov; Fiona M Fennessy; Steven A Eschrich; Anders E Berglund; David A Fenstermacher; Yongqiang Tan; Xiaotao Guo; Thomas L Casavant; Bartley J Brown; Terry A Braun; Andre Dekker; Erik Roelofs; James M Mountz; Fernando Boada; Charles Laymon; Matt Oborski; Daniel L Rubin
Journal:  Magn Reson Imaging       Date:  2012-07-06       Impact factor: 2.546

3.  'Rapid Learning health care in oncology' - an approach towards decision support systems enabling customised radiotherapy'.

Authors:  Philippe Lambin; Erik Roelofs; Bart Reymen; Emmanuel Rios Velazquez; Jeroen Buijsen; Catharina M L Zegers; Sara Carvalho; Ralph T H Leijenaar; Georgi Nalbantov; Cary Oberije; M Scott Marshall; Frank Hoebers; Esther G C Troost; Ruud G P M van Stiphout; Wouter van Elmpt; Trudy van der Weijden; Liesbeth Boersma; Vincenzo Valentini; Andre Dekker
Journal:  Radiother Oncol       Date:  2013-08-28       Impact factor: 6.280

4.  Standardizing naming conventions in radiation oncology.

Authors:  Lakshmi Santanam; Coen Hurkmans; Sasa Mutic; Corine van Vliet-Vroegindeweij; Scott Brame; William Straube; James Galvin; Prabhakar Tripuraneni; Jeff Michalski; Walter Bosch
Journal:  Int J Radiat Oncol Biol Phys       Date:  2012-01-13       Impact factor: 7.038

5.  Rapid-learning system for cancer care.

Authors:  Amy P Abernethy; Lynn M Etheredge; Patricia A Ganz; Paul Wallace; Robert R German; Chalapathy Neti; Peter B Bach; Sharon B Murphy
Journal:  J Clin Oncol       Date:  2010-06-28       Impact factor: 44.544

  5 in total
  6 in total

1.  A semantic database for integrated management of image and dosimetric data in low radiation dose research in medical imaging.

Authors:  Bernard Gibaud; Marine Brenet; Guillaume Pasquier; Alex Vergara Gil; Manuel Bardiès; John Stratakis; John Damilakis; Nicolas Van Dooren; Joël Spaltenstein; Osman Ratib
Journal:  AMIA Annu Symp Proc       Date:  2021-01-25

Review 2.  Ontologies for Liver Diseases Representation: A Systematic Literature Review.

Authors:  Rim Messaoudi; Achraf Mtibaa; Antoine Vacavant; Faïez Gargouri; Faouzi Jaziri
Journal:  J Digit Imaging       Date:  2020-06       Impact factor: 4.056

Review 3.  Assessing the practice of biomedical ontology evaluation: Gaps and opportunities.

Authors:  Muhammad Amith; Zhe He; Jiang Bian; Juan Antonio Lossio-Ventura; Cui Tao
Journal:  J Biomed Inform       Date:  2018-02-17       Impact factor: 6.317

4.  Position of the AI for Health Imaging (AI4HI) network on metadata models for imaging biobanks.

Authors:  Haridimos Kondylakis; Esther Ciarrocchi; Leonor Cerda-Alberich; Ioanna Chouvarda; Lauren A Fromont; Jose Manuel Garcia-Aznar; Varvara Kalokyri; Alexandra Kosvyra; Dawn Walker; Guang Yang; Emanuele Neri
Journal:  Eur Radiol Exp       Date:  2022-07-01

5.  Multicenter CT phantoms public dataset for radiomics reproducibility tests.

Authors:  Petros Kalendralis; Alberto Traverso; Zhenwei Shi; Ivan Zhovannik; René Monshouwer; Martijn P A Starmans; Stefan Klein; Elisabeth Pfaehler; Ronald Boellaard; Andre Dekker; Leonard Wee
Journal:  Med Phys       Date:  2019-01-29       Impact factor: 4.071

6.  FAIR-compliant clinical, radiomics and DICOM metadata of RIDER, interobserver, Lung1 and head-Neck1 TCIA collections.

Authors:  Petros Kalendralis; Zhenwei Shi; Alberto Traverso; Ananya Choudhury; Matthijs Sloep; Ivan Zhovannik; Martijn P A Starmans; Detlef Grittner; Peter Feltens; Rene Monshouwer; Stefan Klein; Rianne Fijten; Hugo Aerts; Andre Dekker; Johan van Soest; Leonard Wee
Journal:  Med Phys       Date:  2020-06-27       Impact factor: 4.071

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.