Literature DB >> 29332244

Structural insights into the function of Elongator.

Udit Dalwadi1, Calvin K Yip2.   

Abstract

Conserved from yeast to humans, Elongator is a protein complex implicated in multiple processes including transcription regulation, α-tubulin acetylation, and tRNA modification, and its defects have been shown to cause human diseases such as familial dysautonomia. Elongator consists of two copies of six core subunits (Elp1, Elp2, Elp3, Elp4, Elp5, and Elp6) that are organized into two subcomplexes: Elp1/2/3 and Elp4/5/6 and form a stable assembly of ~ 850 kDa in size. Although the catalytic subunit of Elongator is Elp3, which contains a radical S-adenosyl-L-methionine (SAM) domain and a putative histone acetyltransferase domain, the Elp4/5/6 subcomplex also possesses ATP-modulated tRNA binding activity. How at the molecular level, Elongator performs its multiple functions and how the different subunits regulate Elongator's activities remains poorly understood. Here, we provide an overview of the proposed functions of Elongator and describe how recent structural studies provide new insights into the mechanism of action of this multifunctional complex.

Entities:  

Keywords:  Electron microscopy; Elongator; Familial dysautonomia; Transcription; X-ray crystallography; tRNA modification

Mesh:

Substances:

Year:  2018        PMID: 29332244     DOI: 10.1007/s00018-018-2747-6

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  76 in total

1.  Elevated levels of two tRNA species bypass the requirement for elongator complex in transcription and exocytosis.

Authors:  Anders Esberg; Bo Huang; Marcus J O Johansson; Anders S Byström
Journal:  Mol Cell       Date:  2006-10-06       Impact factor: 17.970

2.  Human Elongator facilitates RNA polymerase II transcription through chromatin.

Authors:  Jae-Hyun Kim; William S Lane; Danny Reinberg
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

3.  Solution structure of Kti11p from Saccharomyces cerevisiae reveals a novel zinc-binding module.

Authors:  Jianping Sun; Jiahai Zhang; Fangming Wu; Chao Xu; Shujun Li; Wei Zhao; Ziyu Wu; Jihui Wu; Cong-Zhao Zhou; Yunyu Shi
Journal:  Biochemistry       Date:  2005-06-21       Impact factor: 3.162

4.  An early step in wobble uridine tRNA modification requires the Elongator complex.

Authors:  Bo Huang; Marcus J O Johansson; Anders S Byström
Journal:  RNA       Date:  2005-04       Impact factor: 4.942

5.  Centrotemporal sharp wave EEG trait in rolandic epilepsy maps to Elongator Protein Complex 4 (ELP4).

Authors:  Lisa J Strug; Tara Clarke; Theodore Chiang; Minchen Chien; Zeynep Baskurt; Weili Li; Ruslan Dorfman; Bhavna Bali; Elaine Wirrell; Steven L Kugler; David E Mandelbaum; Steven M Wolf; Patricia McGoldrick; Huntley Hardison; Edward J Novotny; Jingyue Ju; David A Greenberg; James J Russo; Deb K Pal
Journal:  Eur J Hum Genet       Date:  2009-01-28       Impact factor: 4.246

6.  Tissue-specific reduction in splicing efficiency of IKBKAP due to the major mutation associated with familial dysautonomia.

Authors:  Math P Cuajungco; Maire Leyne; James Mull; Sandra P Gill; Weining Lu; David Zagzag; Felicia B Axelrod; Channa Maayan; James F Gusella; Susan A Slaugenhaupt
Journal:  Am J Hum Genet       Date:  2003-02-06       Impact factor: 11.025

7.  Two Saccharomyces cerevisiae genes which control sensitivity to G1 arrest induced by Kluyveromyces lactis toxin.

Authors:  A R Butler; J H White; Y Folawiyo; A Edlin; D Gardiner; M J Stark
Journal:  Mol Cell Biol       Date:  1994-09       Impact factor: 4.272

8.  Architecture of the yeast Elongator complex.

Authors:  Maria I Dauden; Jan Kosinski; Olga Kolaj-Robin; Ambroise Desfosses; Alessandro Ori; Celine Faux; Niklas A Hoffmann; Osita F Onuma; Karin D Breunig; Martin Beck; Carsten Sachse; Bertrand Séraphin; Sebastian Glatt; Christoph W Müller
Journal:  EMBO Rep       Date:  2016-12-14       Impact factor: 8.807

9.  Variants of the elongator protein 3 (ELP3) gene are associated with motor neuron degeneration.

Authors:  Claire L Simpson; Robin Lemmens; Katarzyna Miskiewicz; Wendy J Broom; Valerie K Hansen; Paul W J van Vught; John E Landers; Peter Sapp; Ludo Van Den Bosch; Joanne Knight; Benjamin M Neale; Martin R Turner; Jan H Veldink; Roel A Ophoff; Vineeta B Tripathi; Ana Beleza; Meera N Shah; Petroula Proitsi; Annelies Van Hoecke; Peter Carmeliet; H Robert Horvitz; P Nigel Leigh; Christopher E Shaw; Leonard H van den Berg; Pak C Sham; John F Powell; Patrik Verstreken; Robert H Brown; Wim Robberecht; Ammar Al-Chalabi
Journal:  Hum Mol Genet       Date:  2008-11-07       Impact factor: 6.150

10.  The Caenorhabditis elegans Elongator complex regulates neuronal alpha-tubulin acetylation.

Authors:  Jachen A Solinger; Roberta Paolinelli; Holger Klöss; Francesco Berlanda Scorza; Stefano Marchesi; Ursula Sauder; Dai Mitsushima; Fabrizio Capuani; Stephen R Stürzenbaum; Giuseppe Cassata
Journal:  PLoS Genet       Date:  2010-01-22       Impact factor: 5.917

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  11 in total

1.  A comprehensive mechanistic model of iron metabolism in Saccharomyces cerevisiae.

Authors:  Paul A Lindahl
Journal:  Metallomics       Date:  2019-09-18       Impact factor: 4.526

2.  Clinical and molecular findings in a Turkish family with an ultra-rare condition, ELP2-related neurodevelopmental disorder.

Authors:  Mustafa Dogan; Kerem Teralı; Recep Eroz; Huseyin Demirci; Kenan Kocabay
Journal:  Mol Biol Rep       Date:  2021-01-03       Impact factor: 2.316

3.  Hearing Function: Identification of New Candidate Genes Further Explaining the Complexity of This Sensory Ability.

Authors:  Maria Pina Concas; Anna Morgan; Fabrizio Serra; Andries Paul Nagtegaal; Berthe C Oosterloo; Sudha Seshadri; Nancy Heard-Costa; Guy Van Camp; Erik Fransen; Margherita Francescatto; Giancarlo Logroscino; Rodolfo Sardone; Nicola Quaranta; Paolo Gasparini; Giorgia Girotto
Journal:  Genes (Basel)       Date:  2021-08-10       Impact factor: 4.096

Review 4.  The occurrence order and cross-talk of different tRNA modifications.

Authors:  Jing Li; Wen-Yu Zhu; Wen-Qing Yang; Cai-Tao Li; Ru-Juan Liu
Journal:  Sci China Life Sci       Date:  2021-04-19       Impact factor: 6.038

5.  Genome-wide imaging screen uncovers molecular determinants of arsenite-induced protein aggregation and toxicity.

Authors:  Stefanie Andersson; Antonia Romero; Joana Isabel Rodrigues; Sansan Hua; Xinxin Hao; Therese Jacobson; Vivien Karl; Nathalie Becker; Arghavan Ashouri; Sebastien Rauch; Thomas Nyström; Beidong Liu; Markus J Tamás
Journal:  J Cell Sci       Date:  2021-06-04       Impact factor: 5.285

6.  Biochemical and Structural Characterization of Human Core Elongator and Its Subassemblies.

Authors:  Udit Dalwadi; Dhiraj Mannar; Felix Zierhut; Calvin K Yip
Journal:  ACS Omega       Date:  2022-01-18

Review 7.  Secondary Metabolite Gene Regulation in Mycotoxigenic Fusarium Species: A Focus on Chromatin.

Authors:  Anna Katharina Atanasoff-Kardjalieff; Lena Studt
Journal:  Toxins (Basel)       Date:  2022-01-25       Impact factor: 4.546

Review 8.  Control of translation elongation in health and disease.

Authors:  John R P Knight; Gavin Garland; Tuija Pöyry; Emma Mead; Nikola Vlahov; Aristeidis Sfakianos; Stefano Grosso; Fabio De-Lima-Hedayioglu; Giovanna R Mallucci; Tobias von der Haar; C Mark Smales; Owen J Sansom; Anne E Willis
Journal:  Dis Model Mech       Date:  2020-03-26       Impact factor: 5.758

9.  Alanine tRNAs Translate Environment Into Behavior in Caenorhabditis elegans.

Authors:  Diana Andrea Fernandes De Abreu; Thalia Salinas-Giegé; Laurence Drouard; Jean-Jacques Remy
Journal:  Front Cell Dev Biol       Date:  2020-10-30

10.  CURLED LATER1 encoding the largest subunit of the Elongator complex has a unique role in leaf development and meristem function in rice.

Authors:  Hikari Matsumoto; Yukiko Yasui; Yoshihiro Ohmori; Wakana Tanaka; Tetsuya Ishikawa; Hisataka Numa; Kenta Shirasawa; Yojiro Taniguchi; Junichi Tanaka; Yasuhiro Suzuki; Hiro-Yuki Hirano
Journal:  Plant J       Date:  2020-07-31       Impact factor: 7.091

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