| Literature DB >> 25148534 |
Ho-Chang Kuo1, Ying-Hsien Huang1, Shu-Chen Chien2, Hong-Ren Yu1, Kai-Sheng Hsieh1, Yu-Wen Hsu3, Wei-Chiao Chang4.
Abstract
BACKGROUND: Kawasaki disease (KD) is a systemic vasculitis with unknown etiology mainly affecting children in Asian countries. Dendritic cell-specific intercellular adhesion molecule-3 grabbing non-integrin (DC-SIGN, CD209) in humans was showed to trigger an anti-inflammatory cascade and associated with KD susceptibility. This study was conducted to investigate the association between genetic polymorphisms of CD209 and the risk KD.Entities:
Mesh:
Substances:
Year: 2014 PMID: 25148534 PMCID: PMC4141786 DOI: 10.1371/journal.pone.0105236
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Basal characteristics of patients with Kawasaki disease and normal controls.
| Characteristics | Patients with KD | Normal Control |
| N = 381 | N = 567 | |
| Male gender, No. (%) | 247 (66.8%) | 314 (56.2%) |
| Mean (SD) age (years) | 1.7±1.6 | 5.7±4.9 |
| Age range (years) | 0–11 | 0–51 |
| CAL formation | 126 (33.1%) | |
| IVIG resistance | 49 (12.9%) |
CAL: coronary artery lesions; IVIG: intravenous immunoglobulin; SD: standard deviation.
Genotype and allele frequencies of the CD209 gene in controls and patients with Kawasaki disease.
| Genotype | Case (%) (n = 381) | Control (%) (n = 567) | MAF |
| OR (95% CI) | ||
| Case | Control | ||||||
| rs8112310 | AA | 51 (13.7) | 66 (12.2) | 0.361 | 0.359 | 0.5292 | 1.13 (0.77–1.68) |
| AT | 168 (44.9) | 256 (47.4) | |||||
| TT | 155 (41.4) | 218 (40.4) | |||||
| rs4804800 | GG | 46 (12.8) | 45 (8.4) | 0.336 | 0.309 |
|
|
| AG | 149 (41.5) | 240 (45.0) | |||||
| AA | 164 (45.7) | 249 (46.6) | |||||
| rs11465421 | TT | 19 (5.4) | 26 (6.0) | 0.248 | 0.260 | 0.7292 | 0.90 (0.49–1.65) |
| GT | 136 (38.8) | 174 (40.1) | |||||
| GG | 196 (55.8) | 234 (53.9) | |||||
| rs1544766 | GG | 33 (8.8) | 37 (6.7) | 0.294 | 0.279 | 0.2404 | 1.34 (0.82–2.18) |
| AG | 154 (41.2) | 232 (42.3) | |||||
| AA | 187 (50.0) | 280 (51.0) | |||||
| rs4804801 | AA | 54 (15.2) | 65 (14.6) | 0.399 | 0.386 | 0.8011 | 1.05 (0.71–1.56) |
| AT | 175 (49.3) | 214 (48.0) | |||||
| TT | 126 (35.5) | 167 (37.4) | |||||
| rs2287886 | GG | 22(6.0) | 56 (10.9) | 0.296 | 0.338 | 0.0118 | 0.52 (0.32–0.87) |
| AG | 174(47.3) | 237 (45.9) | |||||
| AA | 172(46.7) | 223 (43.2) | |||||
| rs735239 | GG | 9 (2.7) | 10 (3.0) | 0.160 | 0.193 | 0.8421 | 0.91 (0.37–2.27) |
| AG | 86 (26.4) | 108 (32.6) | |||||
| AA | 231 (70.9) | 213 (64.4) | |||||
| rs735240 | AA | 14 (3.9) | 37 (7.3) | 0.215 | 0.265 | 0.0337 | 0.51 (0.27–0.95) |
| AG | 128 (35.2) | 195 (38.4) | |||||
| GG | 221 (60.9) | 276 (54.3) | |||||
| rs4804804 | AA | 77 (22.9) | 87 (20.7) | 0.476 | 0.429 | 0.4550 | 0.80 (0.56–1.14) |
| AG | 166 (49.4) | 187 (44.4) | |||||
| GG | 93 (27.7) | 147 (34.9) | |||||
*Significant (P<0.05) values are in bold.
P values are calculated using the Pearson's x2 test for the recessive model.
ORs are for the recessive model (minor allele homozygotes versus heterozygotes and major allele homozygotes).
Genotype and allele frequencies of CD209 gene in patients having Kawasaki disease with or without coronary artery lesion formation.
| Genotype | CAL (%) (n = 126) | Without (%) (n = 252) | MAF |
| OR (95% CI) | ||
| CAL | Without | ||||||
| rs8112310 | AA | 16 (13.0) | 35 (14.1) | 0.341 | 0.371 | 0.7711 | 0.91 (0.48–1.72) |
| AT | 52 (42.3) | 114 (46.0) | |||||
| TT | 55 (44.7) | 99 (39.9) | |||||
| rs4804800 | GG | 15 (12.6) | 31 (13.1) | 0.315 | 0.346 | 0.8997 | 0.96 (0.50–1.85) |
| AG | 45 (37.8) | 102 (43.0) | |||||
| AA | 59 (49.6) | 104 (43.9) | |||||
| rs11465421 | TT | 4 (3.4) | 15 (6.6) | 0.252 | 0.247 | 0.2142 | 0.50 (0.16–1.50) |
| GT | 52 (43.7) | 83 (36.2) | |||||
| GG | 63 (52.9) | 131 (57.2) | |||||
| rs1544766 | GG | 10 (8.1) | 23 (9.3) | 0.285 | 0.298 | 0.7155 | 0.87 (0.40–1.88) |
| AG | 50 (40.7) | 102 (41.1) | |||||
| AA | 63 (51.2) | 123 (49.6) | |||||
| rs4804801 | AA | 16 (13.8) | 37 (15.7) | 0.371 | 0.411 | 0.6421 | 0.86 (0.46–1.62) |
| AT | 54 (46.5) | 120 (50.8) | |||||
| TT | 46 (39.7) | 79 (33.5) | |||||
| rs2287886 | GG | 4 (3.3) | 18 (7.4) | 0.314 | 0.287 | 0.1239 | 0.43 (0.15–1.26) |
| AG | 68 (56.2) | 104 (42.6) | |||||
| AA | 49 (40.5) | 122 (50.0) | |||||
| rs735239 | GG | 2 (1.9) | 7 (3.2) | 0.175 | 0.151 | 0.4962 | 0.58 (0.12–2.79) |
| AG | 33 (31.1) | 52 (23.7) | |||||
| AA | 71 (67.0) | 159 (72.9) | |||||
| rs735240 | AA | 2 (1.67) | 12 (5.0) | 0.217 | 0.213 | 0.1230 | 0.32 (0.08–1.36) |
| AG | 48 (40.0) | 78 (32.5) | |||||
| GG | 70 (58.3) | 150 (62.5) | |||||
| rs4804804 | AA | 24 (22.6) | 53 (23.2) | 0.500 | 0.469 | 0.9029 | 0.97 (0.56–1.67) |
| AG | 58 (54.8) | 108 (47.4) | |||||
| GG | 24 (22.6) | 67 (29.4) | |||||
*Significant (P<0.05) values are in bold.
P values are calculated using the Pearson's x2 test for the recessive model.
ORs are for the recessive model (minor allele homozygotes versus heterozygotes and major allele homozygotes).
Genotype and allele frequencies of the CD209 gene in patients with Kawasaki disease responding or not responding to intravenous immunoglobulin treatment.
| Genotype | Resistant (%) (n = 49) | Responsive (%) (n = 326) | MAF |
| OR (95% CI) | ||
| Resistant | Responsive | ||||||
| rs8112310 | AA | 9 (18.4) | 41 (12.9) | 0.418 | 0.351 | 0.2942 | 1.53 (0.69–3.36) |
| AT | 23 (46.9) | 142 (44.5) | |||||
| TT | 17 (34.7) | 136 (42.6) | |||||
| rs4804800 | GG | 7 (15.6) | 38 (12.3) | 0.367 | 0.330 | 0.5455 | 1.31 (0.55–3.13) |
| AG | 19 (42.2) | 127 (41.2) | |||||
| AA | 19 (42.2) | 143 (46.4) | |||||
| rs11465421 | TT | 1 (2.2) | 18 (6.0) | 0.189 | 0.259 | 0.3020 | 0.36 (0.05–2.52) |
| GT | 15 (33.3) | 120 (39.9) | |||||
| GG | 29 (64.4) | 163 (54.1) | |||||
| rs1544766 | GG | 5 (10.4) | 27 (8.4) | 0.323 | 0.289 | 0.6500 | 1.26 (0.46–3.45) |
| AG | 21 (43.8) | 131 (40.9) | |||||
| AA | 22 (45.8) | 162 (50.6) | |||||
| rs4804801 | AA | 11 (23.9) | 42 (13.8) | 0.457 | 0.389 | 0.0733 | 1.97 (0.94–4.13) |
| AT | 20 (43.5) | 153 (50.1) | |||||
| TT | 15 (32.6) | 110 (36.1) | |||||
| rs2287886 | GG | 3 (6.2) | 19 (6.0) | 0.271 | 0.299 | 0.9571 | 1.04 (0.29–3.64) |
| AG | 20 (41.7) | 150 (47.8) | |||||
| AA | 25 (52.1) | 145 (46.2) | |||||
| rs735239 | GG | 2 (4.7) | 7 (2.5) | 0.131 | 0.163 | 0.4016 | 1.08 (0.23–4.96) |
| AG | 7 (16.7) | 78 (27.6) | |||||
| AA | 33 (78.6) | 197 (69.9) | |||||
| rs735240 | AA | 2 (4.2) | 12 (3.9) | 0.177 | 0.218 | 0.9251 | 1.08 (0.23–4.96) |
| AG | 13 (27.1) | 111 (35.9) | |||||
| GG | 33 (68.7) | 186 (60.2) | |||||
| rs4804804 | AA | 13 (29.5) | 63 (21.8) | 0.511 | 0.472 | 0.2541 | 1.50 (0.75–3.03) |
| AG | 19 (43.2) | 147 (50.9) | |||||
| GG | 12 (27.3) | 79 (27.3) | |||||
*Significant (P<0.05) values are in bold.
P values are calculated using the Pearson's x2 test for the recessive model.
ORs are for the recessive model (minor allele homozygotes versus heterozygotes and major allele homozygotes).
Figure 1CD209 gene linkage disequilibrium and haplotype block structure in KD.
The number on the cell is the LOD score of D′.
Haplotype frequencies of the CD209 gene in controls and patients with Kawasaki disease.
| rs8112310/rs4804800/rs11465421/rs1544766 | Case (%) (n = 381) | Control (%) (n = 567) | OR (95% CI) |
|
| A/G/G/G | 184 (25.7) | 211 (21.4) | 1.23 (0.94–1.62) | 0.1295 |
| A/G/G/A | 29 (4.1) | 38 (3.9) | 1.08 (0.64–1.82) | 0.7690 |
| T/G/G/G | 12 (1.7) | 15 (1.5) | 1.13 (0.52–2.48) | 0.7542 |
| T/A/G/G | 7 (1.0) | 13 (1.3) | 0.76 (0.30–1.95) | 0.5701 |
| A/A/G/A | 35 (4.9) | 57 (5.8) | 0.87 (0.55–1.38) | 0.5524 |
| T/A/G/A | 256 (35.8) | 380 (38.5) | 0.95 (0.75–1.22) | 0.7081 |
| T/A/T/A | 185 (25.9) | 262 (26.6) | Reference |
Haplotype frequency less than 1% was excluded.
Haplotype frequencies of the CD209 gene in controls and patients with Kawasaki disease.
| rs2287886/rs735239/rs735240 | Case (%) (n = 381) | Control (%) (n = 567) | OR (95% CI) |
|
| A/A/G | 468 (67.2) | 521 (59.5) | 1.61 (1.25–2.08) | 0.0002 |
| A/A/A | 10 (1.4) | 13 (1.5) | 1.38 (0.59–3.25) | 0.4543 |
| G/A/G | 66 (9.5) | 78 (8.9) | 1.52 (1.03–2.26) | 0.0365 |
| G/A/A | 27 (3.9) | 36 (4.1) | 1.35 (0.78–2.33) | 0.2809 |
| G/G/A | 124 (17.8) | 223 (25.5) | Reference |
Haplotype frequency less than 1% was excluded.
**Significant (P<0.01) values are in bold.
*Significant (P<0.05) values are in bold.