| Literature DB >> 25148527 |
Zhi Guan1, Yan-Li Chen1, Yi Yuan1, Jian Song1, Da-Cheng Yang1, Yang Xue1, Yan-Hong He1.
Abstract
A crude extract of earthworms was used as an eco-friendly, environmentally benign, and easily accessible biocatalyst for various organic synthesis including the asymmetric direct aldol and Mannich reactions, Henry and Biginelli reactions, direct three-component aza-Diels-Alder reactions for the synthesis of isoquinuclidines, and domino reactions for the synthesis of coumarins. Most of these reactions have never before seen in nature, and moderate to good enantioselectivities in aldol and Mannich reactions were obtained with this earthworm catalyst. The products can be obtained in preparatively useful yields, and the procedure does not require any additional cofactors or special equipment. This work provides an example of a practical way to use sustainable catalysts from nature.Entities:
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Year: 2014 PMID: 25148527 PMCID: PMC4141794 DOI: 10.1371/journal.pone.0105284
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1The earthworm-catalysed organic reactions.
Figure 2The crude earthworm extract catalysed direct asymmetric aldol reactions.
The crude earthworm extract catalysed direct asymmetric aldol reactionsa.
| Entry | X | R | Product | Time (h) | Yield (%) | dr ( | ee ( |
| 1 | CH2 | 3-CNC6H4 |
| 144 | 96 | 91∶9 | 91 |
| 2 | CH2 | 4-ClC6H4 |
| 139 | 60 | 92∶8 | 91 |
| 3 | CH2 | 4-CF3C6H4 |
| 120 | 84 | 81∶19 | 90 |
| 4 | CH2 | 2,4-Cl2C6H3 |
| 192 | 82 | >99∶1 | 90 |
| 5 | CH2 | 3-MeOC6H4 |
| 192 | 53 | 88∶12 | 91 |
| 6 | O | 4-NO2C6H4 |
| 103 | 75 | 83∶17 | 80 |
| 7 | S | 4-CNC6H4 |
| 117 | 65 | 93∶7 | 90 |
| 8 | CH2 | 4-CNC6H4 |
| 120 | 92 | 87∶13 | 88 |
| 9 (Un-optimized conditions) | CH2 | 4-CNC6H4 |
| 120 | 78 | 78∶22 | 82 |
| 10 (No catalyst) | CH2 | 4-CNC6H4 |
| 120 | Trace | — | — |
| 11 (100°C pretreated crude earthworm extract) | CH2 | 4-CNC6H4 |
| 120 | 39 | 80∶20 | 85 |
| 12 (Cu2+pretreated crude earthworm extract) | CH2 | 4-CNC6H4 |
| 120 | 11 | 78∶22 | 86 |
| 13 (Cu2+ as catalyst) | CH2 | 4-CNC6H4 |
| 120 | trace | — | — |
Optimized reaction conditions: aldehyde (0.50 mmol), ketone (7.50 mmol), the crude earthworm extract (75 mg), deionized water (0.05 mL), and MeCN (0.95 mL) at 25°C.
Yield of the isolated product after silica gel chromatography.
Determined by chiral HPLC analysis performed using Chiralpak AD-H, AS-H, or Chiralcel OD-H column, by comparing the retention time with those of known compounds (For details, please see the Supplementary material).
Un-optimized conditions: 4-cyanobenzaldehyde (0.50 mmol), cyclohexanone (2.50 mmol), the crude earthworm extract (50 mg), deionized water (0.05 mL), and MeCN (0.95 mL) at 30°C.
The reaction was conducted in the absence of the crude earthworm extract, otherwise under the same conditions as entry 9.
The crude earthworm extract (50 mg) in deionized water (3 mL) was stirred at 100°C for 24 h, and then water was removed under reduced pressure before use. The reaction was conducted under the same conditions as entry 9.
The crude earthworm extract (50 mg) in Cu2+ solution (0.25 M) [anhydrous CuSO4 (120 mg) in deionized water (3 mL)] was stirred at 30°C for 24 h, and then water was removed under reduced pressure before use. The reaction was conducted under the same conditions as entry 9.
The reaction was conducted using anhydrous CuSO4 (120 mg) as a catalyst instead of the crude earthworm extract, otherwise under the same conditions as entry 9.
Figure 3The crude earthworm extract catalysed direct asymmetric Mannich reactions.
The crude earthworm extract catalysed direct asymmetric Mannich reactionsa.
| Entry | X | R1 | R2 | Product | Time (h) | Yield (%) | dr ( | ee ( |
| 1 | CH2 | 4-NO2C6H4 | 3-BrC6H4 |
| 96 | 42 | 87∶13 | 76 |
| 2 | CH2 | 4-NO2C6H4 | 4-ClC6H4 |
| 71 | 66 | 84∶16 | 74 |
| 3 | CH2 | 4-NO2C6H4 | 3-MeC6H4 |
| 47 | 75 | 79∶21 | 73 |
| 4 | CH2 | 4-NO2C6H4 | 4-MeC6H4 |
| 47 | 79 | 74∶26 | 71 |
| 5 | S | 4-ClC6H4 | C6H5 |
| 96 | 70 | 43∶57 | 44 |
| 6 | CH2 | 4-NO2C6H4 | C6H5 |
| 72 | 83 | 79∶21 | 75 |
| 7 (Un-optimized conditions) | CH2 | 4-NO2C6H4 | C6H5 |
| 72 | 82 | 63∶37 | 62 |
| 8 (No catalyst) | CH2 | 4-NO2C6H4 | C6H5 |
| 72 | 29 | 38∶62 | 0 |
Optimized reaction conditions: aldehyde (0.50 mmol), arylamine (0.55 mmol), cyclohexanone (5.00 mmol) or tetrahydrothiopyran-4-one (1.00 mmol), buffer (NaH2PO4-Na2HPO4, 0.20 M, pH = 7.53, 0.05 mL), isopropanol (0.95 mL), and the crude earthworm extract (50 mg) at 30°C.
Yield of the isolated product after silica gel chromatography.
Determined by chiral HPLC analysis performed using Chiralpak AD-H or Chiralcel OD-H column, by comparing the retention time with those of known compounds (For details, please see the Supplementary material).
The chiral HPLC did not show baseline separation of peaks.
Un-optimized conditions: 4-nitrobenzaldehyde (0.50 mmol), aniline (0.55 mmol), cyclohexanone (5.00 mmol), deionized water (0.10 mL), isopropanol (0.90 mL) and the crude earthworm extract (50 mg) at 30°C.
The reaction was carried out in the absence of the crude earthworm extract, otherwise under the same conditions as entry 7.
Figure 4The crude earthworm extract catalysed Henry reactions.
The crude earthworm extract catalysed Henry reactionsa.
| Entry | R1 | R2 | Product. | Time (h) | Yield (%) | dr ( |
| 1 | 3-CNC6H4 | H |
| 160 | 85 | — |
| 2 | 4-NO2C6H4 | H |
| 93 | 88 | — |
| 3 | 2-NO2C6H4 | H |
| 93 | 85 | — |
| 4 | 4-CNC6H4 | Me |
| 118 | 92 | 65∶35 |
| 5 | 4-NO2C6H4 | Et |
| 118 | 41 | 66∶34 |
| 6 | 4-CNC6H4 | H |
| 120 | 88 | — |
| 7 (No catalyst) | 4-CNC6H4 | H |
| 104 | Trace | — |
Reaction conditions: aldehyde (0.50 mmol), nitroalkane (2.50 mmol), the crude earthworm extract (50 mg), deionized water (1.00 mL) at 30°C.
Yield of the isolated product after silica gel chromatography.
Determined by 1HNMR in comparison with those of known compounds (For details, please see the Supplementary material).
Figure 5The crude earthworm extract catalysed Biginelli reactions.
The crude earthworm extract catalysed Biginelli reactionsa.
| Entry | R1 | R2 | Product | Time (h) | Yield (%) | ee (%) |
| 1 | 4-MeOC6H4 | Et |
| 169 | 44 | 0 |
| 2 | 3-NO2C6H4 | Et |
| 118 | 76 | 29 (R) |
| 3 | 4-FC6H4 | Et |
| 69 | 53 | 0 |
| 4 | 3-ClC6H4 | Et |
| 119 | 49 | 10 (R) |
| 5 | 2-ClC6H4 | Me |
| 140 | 69 | 20 |
| 6 | 3-NO2-C6H4 | Me |
| 103 | 14 | 57 |
| 7 | C6H5 | Et |
| 72 | 65 | 0 |
| 8 (Un-optimized conditions) | C6H5 | Et |
| 72 | 44 | 0 |
| 9 (No catalyst) | C6H5 | Et |
| 72 | 6 | 0 |
Optimized reaction conditions: aldehyde (0.50 mmol), urea (1.00 mmol), acetoacetate (1.00 mmol), deionized water (0.30 mL), n-butyl acetate (0.70 mL) and the crude earthworm extract (75 mg) at 45°C.
Yield of isolated product after silica gel chromatography.
Determined by chiral HPLC analysis performed using Chiralpak AD-H column, by comparing the retention time with those of known compounds (For details, please see the Supplementary material).
The absolute configuration was not determined.
Un-optimized conditions: benzaldehyde (0.50 mmol), urea (1.00 mmol), ethyl acetoacetate (1.50 mmol), deionized water (0.05 mL), n-butyl acetate (0.95 mL) and the crude earthworm extract (100 mg) at 45°C.
The reaction was carried out in the absence of the crude earthworm extract, otherwise under the same conditions as entry 8.
Figure 6The crude earthworm extract catalysed domino reactions for the synthesis of coumarin derivatives.
The crude earthworm extract catalysed domino reactions for the synthesis of coumarin derivativesa.
| Entry | R1 | R2 | Product | Time (h) | Yield (%) |
| 1 | 5-NO2 | Ph |
| 71 | 80 |
| 2 | 5-Cl | Ph |
| 72 | 86 |
| 3 | 5-OMe | Ph |
| 102 | 75 |
| 4 | 1-naphth | Ph |
| 96 | 87 |
| 5 | H | Ph |
| 99 | 80 |
| 6 | H | OEt |
| 127 | 32 |
| 7 | H | Me |
| 127 | 51 |
| 8 (Un-optimized conditions) | H | Me |
| 100 | 21 |
| 9 (No catalyst) | H | Me |
| 100 | Trace |
Optimized reaction conditions: 11 (4.00 mmol), 12 (1.00 mmol), the crude earthworm extract (150 mg), deionized water (0.15 mL) and DMSO (0.85 mL) at 55°C.
Yield of the isolated product after silica gel chromatography.
Un-optimized conditions: salicylaldehyde (3.00 mmol), ethyl acetoacetate (1.00 mmol), the crude earthworm extract (100 mg), deionized water (0.10 mL) and DMSO (0.90 mL) at 30°C.
The reaction was carried out in the absence of the crude earthworm extract, otherwise under the same conditions as entry 8.
Figure 7The crude earthworm extract catalysed aza-Diels-Alder reactions.
The crude earthworm extract catalysed aza-Diels-Alder reactionsa.
| Entry | R1 | R2 | Product | Yield (15+16) (%) |
|
| 1 | 3-FC6H4 | 4-MeOC6H4 |
| 97 | 68∶32 |
| 2 | 4-FC6H4 | 4-MeOC6H4 |
| 93 | 66∶34 |
| 3 | 4-FC6H4 | C6H5 |
| 99 | 67∶33 |
| 4 | 3-ClC6H4 | 4-MeOC6H4 |
| 92 | 65∶35 |
| 5 | 4-ClC6H4 | 4-MeOC6H4 |
| 86 | 68∶32 |
| 6 (No catalyst) | 4-ClC6H4 | 4-MeOC6H4 |
| Trace | — |
Reaction conditions: aromatic aldehyde (0.50 mmol), aromatic amine (1.50 mmol), cyclohexenone (1.50 mmol), and the crude earthworm extract (100 mg) in MeCN (0.93 mL) and deionized water (0.07 mL) at 35°C for 96 h.
Yield of the isolated products after silica gel chromatography.
Calculated according to the isolated weights of 15 and 16. The endo or exo was determined by 1HNMR in comparison with those of known compounds (For details, please see the Supplementary material).