Literature DB >> 25146232

Direct observation of dynamic mechanical regulation of DNA condensation by environmental stimuli.

Amy Lee1, Adam Karcz, Ryan Akman, Tai Zheng, Sara Kwon, Szu-Ting Chou, Sarah Sucayan, Lucas J Tricoli, Jason M Hustedt, Qixin Leng, Jason D Kahn, A James Mixson, Joonil Seog.   

Abstract

Gene delivery is a promising way to treat hereditary diseases and cancer; however, there is little understanding of DNA:carrier complex mechanical properties, which may be critical for the protection and release of nucleic acids. We applied optical tweezers to directly measure single-molecule mechanical properties of DNA condensed using 19-mer poly-L-lysine (PLL) or branched histidine-lysine (HK) peptides. Force-extension profiles indicate that both carriers condense DNA actively, showing force plateaus during stretching and relaxation cycles. As the environment such as carrier concentration, pH, and the presence of zinc ions changes, DNA:HK complexes showed dynamically regulated mechanical properties at multiple force levels. The fundamental knowledge from this study can be applied to design a mechanically tailored complex which may enhance transfection efficiency by controlling the stability of the complex temporally and spatially.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA condensation; cationic peptides; gene delivery; optical tweezers; single-molecule studies

Mesh:

Substances:

Year:  2014        PMID: 25146232      PMCID: PMC5517097          DOI: 10.1002/anie.201403499

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  34 in total

1.  Replication by a single DNA polymerase of a stretched single-stranded DNA.

Authors:  B Maier; D Bensimon; V Croquette
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-24       Impact factor: 11.205

2.  Unfolding individual nucleosomes by stretching single chromatin fibers with optical tweezers.

Authors:  M L Bennink; S H Leuba; G H Leno; J Zlatanova; B G de Grooth; J Greve
Journal:  Nat Struct Biol       Date:  2001-07

3.  Efficient gene transfer by histidylated polylysine/pDNA complexes.

Authors:  P Midoux; M Monsigny
Journal:  Bioconjug Chem       Date:  1999 May-Jun       Impact factor: 4.774

4.  Optical-trap force transducer that operates by direct measurement of light momentum.

Authors:  Steven B Smith; Yujia Cui; Carlos Bustamante
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

5.  Effect of polymer ionization on the interaction with DNA in nonviral gene delivery systems.

Authors:  Uracha Rungsardthong; Touraj Ehtezazi; Lindsey Bailey; Steven P Armes; Martin C Garnett; Snjezana Stolnik
Journal:  Biomacromolecules       Date:  2003 May-Jun       Impact factor: 6.988

6.  Electrostatic binding and hydrophobic collapse of peptide-nucleic acid aggregates quantified using force spectroscopy.

Authors:  Joan Camunas-Soler; Silvia Frutos; Cristiano V Bizarro; Sara de Lorenzo; Maria Eugenia Fuentes-Perez; Roland Ramsch; Susana Vilchez; Conxita Solans; Fernando Moreno-Herrero; Fernando Albericio; Ramón Eritja; Ernest Giralt; Sukhendu B Dev; Felix Ritort
Journal:  ACS Nano       Date:  2013-06-03       Impact factor: 15.881

7.  Mechanoenzymatic cleavage of the ultralarge vascular protein von Willebrand factor.

Authors:  Xiaohui Zhang; Kenneth Halvorsen; Cheng-Zhong Zhang; Wesley P Wong; Timothy A Springer
Journal:  Science       Date:  2009-06-05       Impact factor: 47.728

8.  A theoretical study of zinc(II) interactions with amino acid models and peptide fragments.

Authors:  Bartosz Trzaskowski; Ludwik Adamowicz; Pierre A Deymier
Journal:  J Biol Inorg Chem       Date:  2007-10-09       Impact factor: 3.358

9.  Single molecule force spectroscopy reveals engineered metal chelation is a general approach to enhance mechanical stability of proteins.

Authors:  Yi Cao; Teri Yoo; Hongbin Li
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-06       Impact factor: 11.205

10.  Polymer-based gene delivery with low cytotoxicity by a unique balance of side-chain termini.

Authors:  D Putnam; C A Gentry; D W Pack; R Langer
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-23       Impact factor: 11.205

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  2 in total

1.  Selective condensation of DNA by aminoglycoside antibiotics.

Authors:  M Kopaczynska; A Schulz; K Fraczkowska; S Kraszewski; H Podbielska; J H Fuhrhop
Journal:  Eur Biophys J       Date:  2015-12-08       Impact factor: 1.733

2.  Recognition of ATT Triplex and DNA:RNA Hybrid Structures by Benzothiazole Ligands.

Authors:  Iva Zonjić; Lidija-Marija Tumir; Ivo Crnolatac; Filip Šupljika; Livio Racané; Sanja Tomić; Marijana Radić Stojković
Journal:  Biomolecules       Date:  2022-02-27
  2 in total

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