Literature DB >> 25141862

Flexibility in crosstalk between H2B ubiquitination and H3 methylation in vivo.

Hanneke Vlaming1, Tibor van Welsem1, Erik L de Graaf2, David Ontoso3, A F Maarten Altelaar2, Pedro A San-Segundo3, Albert J R Heck2, Fred van Leeuwen4.   

Abstract

Histone H2B ubiquitination is a dynamic modification that promotes methylation of histone H3K79 and H3K4. This crosstalk is important for the DNA damage response and has been implicated in cancer. Here, we show that in engineered yeast strains, ubiquitins tethered to every nucleosome promote H3K79 and H3K4 methylation from a proximal as well as a more distal site, but only if in a correct orientation. This plasticity indicates that the exact location of the attachment site, the native ubiquitin-lysine linkage and ubiquitination cycles are not critical for trans-histone crosstalk in vivo. The flexibility in crosstalk also indicates that other ubiquitination events may promote H3 methylation.
© 2014 The Authors.

Entities:  

Keywords:  Dot1; Set1; chromatin; crosstalk; histone ubiquitination

Mesh:

Substances:

Year:  2014        PMID: 25141862      PMCID: PMC4253848          DOI: 10.15252/embr.201438793

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  37 in total

Review 1.  Shaping the landscape: mechanistic consequences of ubiquitin modification of chromatin.

Authors:  Sigurd Braun; Hiten D Madhani
Journal:  EMBO Rep       Date:  2012-06-29       Impact factor: 8.807

2.  H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation.

Authors:  Alastair B Fleming; Cheng-Fu Kao; Cory Hillyer; Michael Pikaart; Mary Ann Osley
Journal:  Mol Cell       Date:  2008-07-11       Impact factor: 17.970

3.  Progressive methylation of ageing histones by Dot1 functions as a timer.

Authors:  Dirk De Vos; Floor Frederiks; Marit Terweij; Tibor van Welsem; Kitty F Verzijlbergen; Ekaterina Iachina; Erik L de Graaf; A F Maarten Altelaar; Gideon Oudgenoeg; Albert J R Heck; Jeroen Krijgsveld; Barbara M Bakker; Fred van Leeuwen
Journal:  EMBO Rep       Date:  2011-09-01       Impact factor: 8.807

4.  The RING finger protein MSL2 in the MOF complex is an E3 ubiquitin ligase for H2B K34 and is involved in crosstalk with H3 K4 and K79 methylation.

Authors:  Lipeng Wu; Barry M Zee; Yanming Wang; Benjamin A Garcia; Yali Dou
Journal:  Mol Cell       Date:  2011-07-08       Impact factor: 17.970

Review 5.  RNF20-RNF40: A ubiquitin-driven link between gene expression and the DNA damage response.

Authors:  Yosef Shiloh; Efrat Shema; Lilach Moyal; Moshe Oren
Journal:  FEBS Lett       Date:  2011-08-04       Impact factor: 4.124

6.  Requirement for Dot1l in murine postnatal hematopoiesis and leukemogenesis by MLL translocation.

Authors:  Stephanie Y Jo; Eric M Granowicz; Ivan Maillard; Dafydd Thomas; Jay L Hess
Journal:  Blood       Date:  2011-02-25       Impact factor: 22.113

7.  ASH2L regulates ubiquitylation signaling to MLL: trans-regulation of H3 K4 methylation in higher eukaryotes.

Authors:  Lipeng Wu; Shirley Y Lee; Bo Zhou; Uyen T T Nguyen; Tom W Muir; Song Tan; Yali Dou
Journal:  Mol Cell       Date:  2013-02-28       Impact factor: 17.970

8.  The n-SET domain of Set1 regulates H2B ubiquitylation-dependent H3K4 methylation.

Authors:  Jaehoon Kim; Jung-Ae Kim; Robert K McGinty; Uyen T T Nguyen; Tom W Muir; C David Allis; Robert G Roeder
Journal:  Mol Cell       Date:  2013-02-28       Impact factor: 17.970

9.  Histone H2BK123 monoubiquitination is the critical determinant for H3K4 and H3K79 trimethylation by COMPASS and Dot1.

Authors:  Shima Nakanishi; Jung Shin Lee; Kathryn E Gardner; Jennifer M Gardner; Yoh-hei Takahashi; Mahesh B Chandrasekharan; Zu-Wen Sun; Mary Ann Osley; Brian D Strahl; Sue L Jaspersen; Ali Shilatifard
Journal:  J Cell Biol       Date:  2009-08-10       Impact factor: 10.539

10.  Patterns and mechanisms of ancestral histone protein inheritance in budding yeast.

Authors:  Marta Radman-Livaja; Kitty F Verzijlbergen; Assaf Weiner; Tibor van Welsem; Nir Friedman; Oliver J Rando; Fred van Leeuwen
Journal:  PLoS Biol       Date:  2011-06-07       Impact factor: 8.029

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  19 in total

1.  Identification of a functional hotspot on ubiquitin required for stimulation of methyltransferase activity on chromatin.

Authors:  Matthew T Holt; Yael David; Sam Pollock; Zhanyun Tang; Jongcheol Jeon; Jaehoon Kim; Robert G Roeder; Tom W Muir
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-03       Impact factor: 11.205

Review 2.  The upstreams and downstreams of H3K79 methylation by DOT1L.

Authors:  Hanneke Vlaming; Fred van Leeuwen
Journal:  Chromosoma       Date:  2016-01-04       Impact factor: 4.316

Review 3.  The interplay of histone H2B ubiquitination with budding and fission yeast heterochromatin.

Authors:  Alexis Zukowski; Aaron M Johnson
Journal:  Curr Genet       Date:  2018-02-20       Impact factor: 3.886

Review 4.  Histone ubiquitylation and its roles in transcription and DNA damage response.

Authors:  Rithy Meas; Peng Mao
Journal:  DNA Repair (Amst)       Date:  2015-09-16

5.  Structural Basis of Dot1L Stimulation by Histone H2B Lysine 120 Ubiquitination.

Authors:  Marco Igor Valencia-Sánchez; Pablo De Ioannes; Miao Wang; Nikita Vasilyev; Ruoyu Chen; Evgeny Nudler; Jean-Paul Armache; Karim-Jean Armache
Journal:  Mol Cell       Date:  2019-04-10       Impact factor: 17.970

Review 6.  The WNT/β-catenin dependent transcription: A tissue-specific business.

Authors:  Simon Söderholm; Claudio Cantù
Journal:  WIREs Mech Dis       Date:  2020-10-21

7.  The ribosome: A hot spot for the identification of new types of protein methyltransferases.

Authors:  Steven G Clarke
Journal:  J Biol Chem       Date:  2018-05-09       Impact factor: 5.157

8.  Dot1 histone methyltransferases share a distributive mechanism but have highly diverged catalytic properties.

Authors:  Iris J E Stulemeijer; Dirk De Vos; Kirsten van Harten; Onkar K Joshi; Olga Blomberg; Tibor van Welsem; Marit Terweij; Hanneke Vlaming; Erik L de Graaf; A F Maarten Altelaar; Barbara M Bakker; Fred van Leeuwen
Journal:  Sci Rep       Date:  2015-05-12       Impact factor: 4.379

9.  Chemical tagging and customizing of cellular chromatin states using ultrafast trans-splicing inteins.

Authors:  Yael David; Miquel Vila-Perelló; Shivam Verma; Tom W Muir
Journal:  Nat Chem       Date:  2015-04-06       Impact factor: 24.427

10.  Evidence that ubiquitylated H2B corrals hDot1L on the nucleosomal surface to induce H3K79 methylation.

Authors:  Linjiao Zhou; Matthew T Holt; Nami Ohashi; Aishan Zhao; Manuel M Müller; Boyuan Wang; Tom W Muir
Journal:  Nat Commun       Date:  2016-02-02       Impact factor: 14.919

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