Literature DB >> 25129823

Microbial communities associated with human decomposition and their potential use as postmortem clocks.

Sheree J Finley1, M Eric Benbow, Gulnaz T Javan.   

Abstract

Most forensic research that is used to better understand how to estimate the postmortem interval (PMI) entails the study of the physiochemical characteristics of decomposition and the effects that environmental factors have on the decomposition process. Forensic entomology exploits the life cycles of arthropods like Diptera (blow flies or flesh flies) and Coleoptera (beetles) deposited on the decaying carcass to determine PMI. Forensic taphonomy, from the Greek word taphos meaning burial, studies the creation of the fossils of decomposed cadavers to ascertain information as to the nature and time of death. Compared to other areas of taphonomy, there have been relatively few forensic science studies that have investigated the impact of human decomposition on the microbial changes occurring on or in a corpse or in the soil communities underneath a body. Such research may facilitate the critical determination of PMI. Therefore, the scope of this review is to provide a concise summary of the current progress in the newly emerging field of microbial diversity and the next-generation metagenomic sequencing approaches for assessing these communities in humans and in the soil beneath decomposing human.

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Year:  2014        PMID: 25129823     DOI: 10.1007/s00414-014-1059-0

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  66 in total

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4.  PCR fidelity of pfu DNA polymerase and other thermostable DNA polymerases.

Authors:  J Cline; J C Braman; H H Hogrefe
Journal:  Nucleic Acids Res       Date:  1996-09-15       Impact factor: 16.971

Review 5.  Microbes as forensic indicators.

Authors:  G Alan; J P Sarah
Journal:  Trop Biomed       Date:  2012-09       Impact factor: 0.623

6.  A preliminary investigation of the stages of adipocere formation.

Authors:  Shari L Forbes; Barbara H Stuart; Ian R Dadour; Boyd B Dent
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7.  Post mortem changes in relation to different types of clothing.

Authors:  C H Teo; A H Pawita; O Khairul; A G Atiah Ayunni; H Noor Hazfalinda
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8.  A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers.

Authors:  Michael A Quail; Miriam Smith; Paul Coupland; Thomas D Otto; Simon R Harris; Thomas R Connor; Anna Bertoni; Harold P Swerdlow; Yong Gu
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9.  Mutants of Taq DNA polymerase resistant to PCR inhibitors allow DNA amplification from whole blood and crude soil samples.

Authors:  Milko B Kermekchiev; Lyubka I Kirilova; Erika E Vail; Wayne M Barnes
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Review 10.  Next-generation sequence assembly: four stages of data processing and computational challenges.

Authors:  Sara El-Metwally; Taher Hamza; Magdi Zakaria; Mohamed Helmy
Journal:  PLoS Comput Biol       Date:  2013-12-12       Impact factor: 4.475

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  13 in total

Review 1.  From Evolutionary Advantage to Disease Agents: Forensic Reevaluation of Host-Microbe Interactions and Pathogenicity.

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2.  Microbial population analysis improves the evidential value of faecal traces in forensic investigations.

Authors:  Frederike C A Quaak; Mei-Lan M de Graaf; Rob Weterings; Irene Kuiper
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3.  High-throughput 16S rDNA sequencing assisting in the detection of bacterial pathogen candidates: a fatal case of necrotizing fasciitis in a child.

Authors:  Dong Qu; Dong-Fang Qiao; Michael Klintschar; Zhi Qu; Xia Yue
Journal:  Int J Legal Med       Date:  2020-09-08       Impact factor: 2.686

4.  Insights into the Differential Preservation of Bone Proteomes in Inhumed and Entombed Cadavers from Italian Forensic Caseworks.

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5.  Functional and Structural Succession of Soil Microbial Communities below Decomposing Human Cadavers.

Authors:  Kelly L Cobaugh; Sean M Schaeffer; Jennifer M DeBruyn
Journal:  PLoS One       Date:  2015-06-12       Impact factor: 3.240

6.  Potential use of bacterial community succession for estimating post-mortem interval as revealed by high-throughput sequencing.

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Journal:  Sci Rep       Date:  2016-04-07       Impact factor: 4.379

7.  Bone Diagenesis in Short Timescales: Insights from an Exploratory Proteomic Analysis.

Authors:  Noemi Procopio; Caley A Mein; Sefora Starace; Andrea Bonicelli; Anna Williams
Journal:  Biology (Basel)       Date:  2021-05-23

8.  Characterizing forensically important insect and microbial community colonization patterns in buried remains.

Authors:  Lavinia Iancu; Emily N Junkins; Georgiana Necula-Petrareanu; Cristina Purcarea
Journal:  Sci Rep       Date:  2018-10-19       Impact factor: 4.379

9.  Bacterial Community Succession, Transmigration, and Differential Gene Transcription in a Controlled Vertebrate Decomposition Model.

Authors:  Zachary M Burcham; Jennifer L Pechal; Carl J Schmidt; Jeffrey L Bose; Jason W Rosch; M Eric Benbow; Heather R Jordan
Journal:  Front Microbiol       Date:  2019-04-18       Impact factor: 5.640

10.  Microbial succession from a subsequent secondary death event following mass mortality.

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Journal:  BMC Microbiol       Date:  2020-10-13       Impact factor: 3.605

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