| Literature DB >> 25120926 |
Vinayagam Ramesh1, Vytla Ramachandra Murty1.
Abstract
Glucoamylase is an industrially important enzyme which converts soluble starch into glucose. The media components for the production of glucoamylase from thermophilic fungus Humicola grisea MTCC 352 have been optimized. Eight media components, namely, soluble starch, yeast extract, KH2PO4, K2HPO4, NaCl, CaCl2, MgSO4 ·7H2O, and Vogel's trace elements solution, were first screened for their effect on the production of glucoamylase and only four components (soluble starch, yeast extract, K2HPO4, and MgSO4 ·7H2O) were identified as statistically significant using Plackett-Burman design. It was fitted into a first-order model (R (2) = 0.9859). Steepest ascent method was performed to identify the location of optimum. Central composite design was employed to determine the optimum values (soluble starch: 28.41 g/L, yeast extract: 9.61 g/L, K2HPO4: 2.42 g/L, and MgSO4 ·7H2O: 1.91 g/L). The experimental activity of 12.27 U/mL obtained was close to the predicted activity of 12.15. High R (2) value (0.9397), low PRESS value (9.47), and AARD values (2.07%) indicate the accuracy of the proposed model. The glucoamylase production was found to increase from 4.57 U/mL to 12.27 U/mL, a 2.68-fold enhancement, as compared to the unoptimized medium.Entities:
Year: 2014 PMID: 25120926 PMCID: PMC4120784 DOI: 10.1155/2014/317940
Source DB: PubMed Journal: Enzyme Res ISSN: 2090-0414
Different levels of experimental variables used for the production of glucoamylase using Plackett-Burman design.
| Symbol | Variable | Units | Coded level | ||
|---|---|---|---|---|---|
| −1 | 0 | 1 | |||
|
| Soluble starch | (g/L) | 5 | 10 | 15 |
|
| Yeast extract | (g/L) | 1 | 3 | 5 |
|
| KH2PO4 | (g/L) | 0.5 | 1 | 1.5 |
|
| K2HPO4 | (g/L) | 0.5 | 1 | 1.5 |
|
| NaCl | (g/L) | 0.5 | 1 | 1.5 |
|
| CaCl2 | (g/L) | 0.5 | 1 | 1.5 |
|
| MgSO4
| (g/L) | 0.5 | 1 | 1.5 |
|
| Vogel's solution | (mL) | 0.1 | 0.5 | 1 |
Plackett-Burman experimental design matrix for glucoamylase production.
| Run |
|
|
|
|
|
|
|
| Glucoamylase activity (U/mL) |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1 | 1 | −1 | 1 | −1 | −1 | −1 | 1 | 6.31 |
| 2 | −1 | 1 | 1 | 1 | −1 | 1 | 1 | −1 | 4.87 |
| 3 | −1 | 1 | 1 | −1 | 1 | −1 | −1 | −1 | 3.78 |
| 4 | −1 | −1 | −1 | −1 | −1 | −1 | −1 | −1 | 3.02 |
| 5 | −1 | −1 | −1 | 1 | 1 | 1 | −1 | 1 | 3.97 |
| 6 | 1 | −1 | 1 | 1 | −1 | 1 | −1 | −1 | 4.94 |
| 7 | −1 | 1 | −1 | −1 | −1 | 1 | 1 | 1 | 4.83 |
| 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4.57 |
| 9 | 1 | 1 | 1 | −1 | 1 | 1 | −1 | 1 | 5.43 |
| 10 | −1 | −1 | 1 | 1 | 1 | −1 | 1 | 1 | 4.74 |
| 11 | 1 | −1 | 1 | −1 | −1 | −1 | 1 | 1 | 4.79 |
| 12 | 1 | 1 | −1 | 1 | 1 | −1 | 1 | −1 | 6.56 |
| 13 | 1 | −1 | −1 | −1 | 1 | 1 | 1 | −1 | 5.01 |
Experimental results of the path of steepest ascent.
| Variable | Soluble starch (g/L) | Yeast extract (g/L) | K2HPO4 (g/L) | MgSO4
| Glucoamylase activity (U/mL) |
|---|---|---|---|---|---|
| Base point (zero level in the PBD) | 10 | 3 | 1 | 1 | |
| Origin step unit (concentration range of unity level) | 5 | 2 | 0.5 | 0.5 | |
| Slope (estimated coefficient ratio from equation) | 0.6525 | 0.4425 | 0.3775 | 0.2792 | |
| New step unit (slope × origin step unit) | 3.26 | 0.89 | 0.19 | 0.14 | |
| Run 1 | 13.26 | 3.89 | 1.19 | 1.14 | 5.16 |
| Run 2 | 16.52 | 4.78 | 1.38 | 1.28 | 5.91 |
| Run 3 | 19.78 | 5.67 | 1.57 | 1.42 | 6.88 |
| Run 4 | 23.04 | 6.56 | 1.76 | 1.56 | 8.13 |
| Run 5 | 26.3 | 7.45 | 1.95 | 1.7 | 9.42 |
| Run 6 | 29.56 | 8.34 | 2.14 | 1.84 | 10.48 |
| Run 7 | 32.82 | 9.23 | 2.33 | 1.98 | 11.64 |
| Run 8 | 36.08 | 10.12 | 2.52 | 2.12 | 10.28 |
| Run 9 | 39.34 | 11.01 | 2.71 | 2.26 | 9.67 |
| Run 10 | 42.6 | 11.9 | 2.9 | 2.4 | 9.21 |
Ranges of the independent variables used in central composite design.
| Symbol | Variable | Unit | Coded level | ||||
|---|---|---|---|---|---|---|---|
| −2 | −1 | 0 | 1 | 2 | |||
|
| Soluble starch | (g/L) | 26.3 | 29.56 | 32.82 | 36.08 | 39.34 |
|
| Yeast extract | (g/L) | 7.45 | 8.34 | 9.23 | 10.12 | 11.01 |
|
| K2HPO4 | (g/L) | 1.95 | 2.14 | 2.33 | 2.52 | 2.71 |
|
| MgSO4
| (g/L) | 1.7 | 1.84 | 1.98 | 2.12 | 2.26 |
Central composite design matrix for the experimental design and predicted responses for glucoamylase activity.
| Trial | Coded variable level | Glucoamylase activity (U/mL) | ||||
|---|---|---|---|---|---|---|
|
|
|
|
| Observed | Predicted | |
| 1 | −1 | −1 | 1 | −1 | 10.73 | 10.498 |
| 2 | 0 | 0 | 0 | 0 | 11.56 | 11.65 |
| 3 | 1 | 1 | 1 | 1 | 10.2 | 10.156 |
| 4 | 0 | 0 | 0 | 0 | 11.72 | 11.65 |
| 5 | 0 | 0 | 2 | 0 | 9.42 | 9.845 |
| 6 | 0 | 0 | 0 | 2 | 8.41 | 9.031 |
| 7 | 1 | 1 | −1 | −1 | 8.38 | 8.186 |
| 8 | −1 | −1 | −1 | −1 | 10.56 | 10.362 |
| 9 | −1 | −1 | 1 | 1 | 8.93 | 8.883 |
| 10 | −1 | 1 | 1 | −1 | 11.87 | 11.737 |
| 11 | −1 | 1 | −1 | 1 | 10.22 | 9.779 |
| 12 | 1 | 1 | 1 | −1 | 10.4 | 10.191 |
| 13 | −2 | 0 | 0 | 0 | 11.35 | 11.703 |
| 14 | 0 | 0 | 0 | 0 | 11.82 | 11.65 |
| 15 | 1 | −1 | −1 | 1 | 9.42 | 9.311 |
| 16 | 1 | −1 | −1 | −1 | 8.96 | 8.996 |
| 17 | 2 | 0 | 0 | 0 | 9.54 | 9.758 |
| 18 | 0 | 0 | 0 | 0 | 11.62 | 11.65 |
| 19 | 0 | 0 | 0 | −2 | 9.77 | 9.72 |
| 20 | 0 | 0 | 0 | 0 | 11.48 | 11.65 |
| 21 | 1 | −1 | 1 | −1 | 9.02 | 9.219 |
| 22 | −1 | 1 | −1 | −1 | 9.56 | 9.82 |
| 23 | 0 | 0 | −2 | 0 | 8.52 | 8.666 |
| 24 | 0 | −2 | 0 | 0 | 8.69 | 8.935 |
| 25 | 0 | 0 | 0 | 0 | 11.71 | 11.65 |
| 26 | −1 | 1 | 1 | 1 | 11.1 | 10.735 |
| 27 | 0 | 0 | 0 | 0 | 11.64 | 11.65 |
| 28 | 1 | 1 | −1 | 1 | 9.21 | 9.113 |
| 29 | 1 | −1 | 1 | 1 | 9.16 | 8.571 |
| 30 | 0 | 2 | 0 | 0 | 9.65 | 9.976 |
| 31 | −1 | −1 | −1 | 1 | 9.83 | 9.71 |
Statistical analysis of PBD on glucoamylase activity.
| Variables | Main effect | Coefficients | Standard error |
|
| Confidence level (%) |
|---|---|---|---|---|---|---|
| Intercept | 4.8542 | 0.065 | 74.68 | <0.0001 | ||
|
| 1.3050 | 0.6525 | 0.065 | 10.04 | 0.002 | 99.80∗ |
|
| 0.8850 | 0.4425 | 0.065 | 6.81 | 0.006 | 99.40∗ |
|
| −0.1917 | −0.0958 | 0.065 | −1.47 | 0.237 | 76.30 |
|
| 0.7550 | 0.3775 | 0.065 | 5.81 | 0.010 | 99.00∗ |
|
| 0.1217 | 0.0608 | 0.065 | 0.94 | 0.418 | 58.20 |
|
| −0.0250 | −0.0125 | 0.065 | −0.19 | 0.860 | 14.00 |
|
| 0.5583 | 0.2792 | 0.065 | 4.29 | 0.023 | 97.70∗ |
|
| 0.3150 | 0.1575 | 0.065 | 2.42 | 0.094 | 90.60 |
*Statistically significant at 95% confidence level.
Figure 1Pareto plot shows the effect of media on glucoamylase activity.
Analysis of variance (ANOVA) for the fitted second-order polynomial model for optimization of glucoamylase production.
| Variables | Coefficient estimate | Sum of squares | Degrees of freedom |
|
|
|---|---|---|---|---|---|
| Model | 11.65 | 38.9579 | 14 | 22.06 | <0.0001 |
|
| −0.48625 | 10.0955 | 1 | 44.98 | <0.0001 |
|
| 0.260417 | 5.6745 | 1 | 12.9 | 0.002 |
|
| 0.294583 | 1.6276 | 1 | 16.51 | 0.001 |
|
| −0.172083 | 2.0827 | 1 | 5.63 | 0.03 |
|
| −0.229896 | 0.1854 | 1 | 11.98 | 0.003 |
|
| −0.548646 | 5.5598 | 1 | 68.23 | <0.0001 |
|
| −0.598646 | 8.3763 | 1 | 81.23 | <0.0001 |
|
| −0.568646 | 9.2467 | 1 | 73.3 | <0.0001 |
|
| −0.066875 | 0.0716 | 1 | 0.57 | 0.462 |
|
| 0.021875 | 0.0077 | 1 | 0.06 | 0.809 |
|
| 0.241875 | 0.9361 | 1 | 7.42 | 0.015 |
|
| 0.445625 | 3.1773 | 1 | 25.19 | <0.0001 |
|
| 0.153125 | 0.3752 | 1 | 2.97 | 0.104 |
|
| −0.240625 | 0.9264 | 1 | 7.34 | 0.015 |
| Residual | 2.0185 | 16 | |||
| Lack of fit | 1.9431 | 10 | 15.46 | 0.002 | |
| Pure error | 0.0754 | 6 | |||
|
| |||||
| Total | 40.9763 | 30 | |||
R 2 = 95.07%, R 2 Adj = 90.76%, R 2 Pre = 72.44%, and PRESS: 11.29.
Figure 2Normal probability plot of glucoamylase production.
Figure 3Contour plots of interaction effect of variables on glucoamylase activity (U/mL).