Literature DB >> 25115889

The exosome complex establishes a barricade to erythroid maturation.

Skye C McIver1, Yoon-A Kang1, Andrew W DeVilbiss1, Chelsea A O'Driscoll1, Jonathan N Ouellette1, Nathaniel J Pope1, Genis Camprecios2, Chan-Jung Chang3, David Yang4, Eric E Bouhassira3, Saghi Ghaffari2, Emery H Bresnick1.   

Abstract

Complex genetic networks control hematopoietic stem cell differentiation into progenitors that give rise to billions of erythrocytes daily. Previously, we described a role for the master regulator of erythropoiesis, GATA-1, in inducing genes encoding components of the autophagy machinery. In this context, the Forkhead transcription factor, Foxo3, amplified GATA-1-mediated transcriptional activation. To determine the scope of the GATA-1/Foxo3 cooperativity, and to develop functional insights, we analyzed the GATA-1/Foxo3-dependent transcriptome in erythroid cells. GATA-1/Foxo3 repressed expression of Exosc8, a pivotal component of the exosome complex, which mediates RNA surveillance and epigenetic regulation. Strikingly, downregulating Exosc8, or additional exosome complex components, in primary erythroid precursor cells induced erythroid cell maturation. Our results demonstrate a new mode of controlling erythropoiesis in which multiple components of the exosome complex are endogenous suppressors of the erythroid developmental program.
© 2014 by The American Society of Hematology.

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Year:  2014        PMID: 25115889      PMCID: PMC4183988          DOI: 10.1182/blood-2014-04-571083

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  72 in total

1.  RNA elimination machinery targeting meiotic mRNAs promotes facultative heterochromatin formation.

Authors:  Martin Zofall; Soichiro Yamanaka; Francisca E Reyes-Turcu; Ke Zhang; Chanan Rubin; Shiv I S Grewal
Journal:  Science       Date:  2011-12-01       Impact factor: 47.728

2.  Autophagy driven by a master regulator of hematopoiesis.

Authors:  Yoon-A Kang; Rajendran Sanalkumar; Henriette O'Geen; Amelia K Linnemann; Chan-Jung Chang; Eric E Bouhassira; Peggy J Farnham; Sunduz Keles; Emery H Bresnick
Journal:  Mol Cell Biol       Date:  2011-10-24       Impact factor: 4.272

Review 3.  From stem cell to red cell: regulation of erythropoiesis at multiple levels by multiple proteins, RNAs, and chromatin modifications.

Authors:  Shilpa M Hattangadi; Piu Wong; Lingbo Zhang; Johan Flygare; Harvey F Lodish
Journal:  Blood       Date:  2011-10-12       Impact factor: 22.113

4.  Ontogeny of erythroid gene expression.

Authors:  Paul D Kingsley; Emily Greenfest-Allen; Jenna M Frame; Timothy P Bushnell; Jeffrey Malik; Kathleen E McGrath; Christian J Stoeckert; James Palis
Journal:  Blood       Date:  2012-12-12       Impact factor: 22.113

Review 5.  Nuclear noncoding RNA surveillance: is the end in sight?

Authors:  Sandra L Wolin; Soyeong Sim; Xinguo Chen
Journal:  Trends Genet       Date:  2012-04-02       Impact factor: 11.639

6.  TP53INP1 is a novel p73 target gene that induces cell cycle arrest and cell death by modulating p73 transcriptional activity.

Authors:  Richard Tomasini; Mylène Seux; Jonathan Nowak; Caroline Bontemps; Alice Carrier; Jean-Charles Dagorn; Marie-Josèphe Pébusque; Juan L Iovanna; Nelson J Dusetti
Journal:  Oncogene       Date:  2005-12-08       Impact factor: 9.867

7.  Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex.

Authors:  Debora Lika Makino; Marc Baumgärtner; Elena Conti
Journal:  Nature       Date:  2013-02-03       Impact factor: 49.962

8.  Surveillance of nuclear-restricted pre-ribosomes within a subnucleolar region of Saccharomyces cerevisiae.

Authors:  Christophe Dez; Jonathan Houseley; David Tollervey
Journal:  EMBO J       Date:  2006-03-16       Impact factor: 11.598

9.  Global gene expression analysis of human erythroid progenitors.

Authors:  Alison T Merryweather-Clarke; Ann Atzberger; Shamit Soneji; Nicki Gray; Kevin Clark; Craig Waugh; Simon J McGowan; Stephen Taylor; Asoke K Nandi; William G Wood; David J Roberts; Douglas R Higgs; Veronica J Buckle; Kathryn J H Robson
Journal:  Blood       Date:  2011-01-26       Impact factor: 22.113

10.  FOXO3A directs a protective autophagy program in haematopoietic stem cells.

Authors:  Matthew R Warr; Mikhail Binnewies; Johanna Flach; Damien Reynaud; Trit Garg; Ritu Malhotra; Jayanta Debnath; Emmanuelle Passegué
Journal:  Nature       Date:  2013-02-06       Impact factor: 49.962

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  34 in total

1.  TAF10 Interacts with the GATA1 Transcription Factor and Controls Mouse Erythropoiesis.

Authors:  Petros Papadopoulos; Laura Gutiérrez; Jeroen Demmers; Elisabeth Scheer; Farzin Pourfarzad; Dimitris N Papageorgiou; Elena Karkoulia; John Strouboulis; Harmen J G van de Werken; Reinier van der Linden; Peter Vandenberghe; Dick H W Dekkers; Sjaak Philipsen; Frank Grosveld; Làszlò Tora
Journal:  Mol Cell Biol       Date:  2015-04-13       Impact factor: 4.272

Review 2.  The GATA factor revolution in hematology.

Authors:  Koichi R Katsumura; Emery H Bresnick
Journal:  Blood       Date:  2017-02-08       Impact factor: 22.113

3.  Following Transcriptome to Uncover FOXO Biological Functions.

Authors:  Raymond Liang; Vijay Menon; Saghi Ghaffari
Journal:  Methods Mol Biol       Date:  2019

4.  GATA Factor-Regulated Samd14 Enhancer Confers Red Blood Cell Regeneration and Survival in Severe Anemia.

Authors:  Kyle J Hewitt; Koichi R Katsumura; Daniel R Matson; Prithvia Devadas; Nobuyuki Tanimura; Alexander S Hebert; Joshua J Coon; Jin-Soo Kim; Colin N Dewey; Sunduz Keles; Siyang Hao; Robert F Paulson; Emery H Bresnick
Journal:  Dev Cell       Date:  2017-08-07       Impact factor: 12.270

Review 5.  Transcription factors FOXO in the regulation of homeostatic hematopoiesis.

Authors:  Vijay Menon; Saghi Ghaffari
Journal:  Curr Opin Hematol       Date:  2018-07       Impact factor: 3.284

Review 6.  Biology of RNA Surveillance in Development and Disease.

Authors:  Brice Laffleur; Uttiya Basu
Journal:  Trends Cell Biol       Date:  2019-02-10       Impact factor: 20.808

7.  Helicase-Dependent RNA Decay Illuminated by a Cryo-EM Structure of a Human Nuclear RNA Exosome-MTR4 Complex.

Authors:  Eva-Maria Weick; M Rhyan Puno; Kurt Januszyk; John C Zinder; Michael A DiMattia; Christopher D Lima
Journal:  Cell       Date:  2018-06-14       Impact factor: 41.582

8.  Comprehensive characterization of the rRNA metabolism-related genes in human cancer.

Authors:  Kaisa Cui; Cheng Liu; Xu Li; Qiang Zhang; Youjun Li
Journal:  Oncogene       Date:  2019-09-23       Impact factor: 9.867

Review 9.  Rrp6: Integrated roles in nuclear RNA metabolism and transcription termination.

Authors:  Melanie J Fox; Amber L Mosley
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-11-26       Impact factor: 9.957

Review 10.  Advances in understanding the mechanisms of erythropoiesis in homeostasis and disease.

Authors:  Raymond Liang; Saghi Ghaffari
Journal:  Br J Haematol       Date:  2016-07-21       Impact factor: 6.998

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