Literature DB >> 30414157

Following Transcriptome to Uncover FOXO Biological Functions.

Raymond Liang1,2, Vijay Menon1, Saghi Ghaffari3,4,5,6.   

Abstract

Two and half million red blood cells (RBC) are generated every second in a healthy adult. The process of RBC production known as erythropoiesis requires a meticulous synchrony between signaling processes and the activity of many transcription factor complexes. FOXO3 is a transcription factor that is responsive to signaling processes and essential for the erythroid proliferation and maturation, RBC formation, and lifespan. Here, we discuss how using an integrated computational and experimental systems biology approach new and unanticipated FOXO3 functions in terminal erythropoiesis were uncovered. These combinatory approaches identified FOXO3 as a key regulator of terminal erythropoiesis. As a result, a new mode of FOXO3 participation in erythroid transcription complex formation has been proposed.

Entities:  

Keywords:  Enucleation; Erythropoiesis; FOXO; FOXO3; Mitochondria; Mitophagy; RNA sequencing; Red blood cell (RBC); Transcriptome

Mesh:

Substances:

Year:  2019        PMID: 30414157      PMCID: PMC6900592          DOI: 10.1007/978-1-4939-8900-3_18

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  17 in total

1.  miR-451 protects against erythroid oxidant stress by repressing 14-3-3zeta.

Authors:  Duonan Yu; Camila O dos Santos; Guowei Zhao; Jing Jiang; Julio D Amigo; Eugene Khandros; Louis C Dore; Yu Yao; Janine D'Souza; Zhe Zhang; Saghi Ghaffari; John Choi; Sherree Friend; Wei Tong; Jordan S Orange; Barry H Paw; Mitchell J Weiss
Journal:  Genes Dev       Date:  2010-08-01       Impact factor: 11.361

2.  GATA1 function, a paradigm for transcription factors in hematopoiesis.

Authors:  Rita Ferreira; Kinuko Ohneda; Masayuki Yamamoto; Sjaak Philipsen
Journal:  Mol Cell Biol       Date:  2005-02       Impact factor: 4.272

3.  The exosome complex establishes a barricade to erythroid maturation.

Authors:  Skye C McIver; Yoon-A Kang; Andrew W DeVilbiss; Chelsea A O'Driscoll; Jonathan N Ouellette; Nathaniel J Pope; Genis Camprecios; Chan-Jung Chang; David Yang; Eric E Bouhassira; Saghi Ghaffari; Emery H Bresnick
Journal:  Blood       Date:  2014-08-12       Impact factor: 22.113

4.  A member of Forkhead family transcription factor, FKHRL1, is one of the downstream molecules of phosphatidylinositol 3-kinase-Akt activation pathway in erythropoietin signal transduction.

Authors:  Y Kashii; M Uchida; K Kirito; M Tanaka; K Nishijima; M Toshima; T Ando; K Koizumi; T Endoh; K Sawada; M Momoi; Y Miura; K Ozawa; N Komatsu
Journal:  Blood       Date:  2000-08-01       Impact factor: 22.113

5.  Differential regulation of Foxo3a target genes in erythropoiesis.

Authors:  Walbert J Bakker; Thamar B van Dijk; Martine Parren-van Amelsvoort; Andrea Kolbus; Kazuo Yamamoto; Peter Steinlein; Roel G W Verhaak; Tak W Mak; Hartmut Beug; Bob Löwenberg; Marieke von Lindern
Journal:  Mol Cell Biol       Date:  2007-05       Impact factor: 4.272

Review 6.  Networking erythropoiesis.

Authors:  Marc A Kerenyi; Stuart H Orkin
Journal:  J Exp Med       Date:  2010-11-22       Impact factor: 14.307

7.  FOXO3-mTOR metabolic cooperation in the regulation of erythroid cell maturation and homeostasis.

Authors:  Xin Zhang; Genís Campreciós; Pauline Rimmelé; Raymond Liang; Safak Yalcin; Sathish Kumar Mungamuri; Jeffrey Barminko; Valentina D'Escamard; Margaret H Baron; Carlo Brugnara; Dmitri Papatsenko; Stefano Rivella; Saghi Ghaffari
Journal:  Am J Hematol       Date:  2014-07-22       Impact factor: 10.047

8.  Cytokines and BCR-ABL mediate suppression of TRAIL-induced apoptosis through inhibition of forkhead FOXO3a transcription factor.

Authors:  Saghi Ghaffari; Zainab Jagani; Claire Kitidis; Harvey F Lodish; Roya Khosravi-Far
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-15       Impact factor: 11.205

9.  Resveratrol accelerates erythroid maturation by activation of FoxO3 and ameliorates anemia in beta-thalassemic mice.

Authors:  Sara Santos Franco; Luigia De Falco; Saghi Ghaffari; Carlo Brugnara; David A Sinclair; Alessandro Matte'; Achille Iolascon; Narla Mohandas; Mariarita Bertoldi; Xiuli An; Angela Siciliano; Pauline Rimmelé; Maria Domenica Cappellini; Shaday Michan; Elisa Zoratti; Janin Anne; Lucia De Franceschi
Journal:  Haematologica       Date:  2013-08-23       Impact factor: 9.941

10.  A Systems Approach Identifies Essential FOXO3 Functions at Key Steps of Terminal Erythropoiesis.

Authors:  Raymond Liang; Genís Campreciós; Yan Kou; Kathleen McGrath; Roberta Nowak; Seana Catherman; Carolina L Bigarella; Pauline Rimmelé; Xin Zhang; Merlin Nithya Gnanapragasam; James J Bieker; Dmitri Papatsenko; Avi Ma'ayan; Emery Bresnick; Velia Fowler; James Palis; Saghi Ghaffari
Journal:  PLoS Genet       Date:  2015-10-09       Impact factor: 5.917

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