Literature DB >> 25063993

Solution NMR structures of Pyrenophora tritici-repentis ToxB and its inactive homolog reveal potential determinants of toxin activity.

Afua Nyarko1, Kiran K Singarapu2, Melania Figueroa3, Viola A Manning3, Iovanna Pandelova3, Thomas J Wolpert3, Lynda M Ciuffetti4, Elisar Barbar5.   

Abstract

Pyrenophora tritici-repentis Ptr ToxB (ToxB) is a proteinaceous host-selective toxin produced by Pyrenophora tritici-repentis (P. tritici-repentis), a plant pathogenic fungus that causes the disease tan spot of wheat. One feature that distinguishes ToxB from other host-selective toxins is that it has naturally occurring homologs in non-pathogenic P. tritici-repentis isolates that lack toxic activity. There are no high-resolution structures for any of the ToxB homologs, or for any protein with >30% sequence identity, and therefore what underlies activity remains an open question. Here, we present the NMR structures of ToxB and its inactive homolog Ptr toxb. Both proteins adopt a β-sandwich fold comprising three strands in each half that are bridged together by two disulfide bonds. The inactive toxb, however, shows higher flexibility localized to the sequence-divergent β-sandwich half. The absence of toxic activity is attributed to a more open structure in the vicinity of one disulfide bond, higher flexibility, and residue differences in an exposed loop that likely impacts interaction with putative targets. We propose that activity is regulated by perturbations in a putative active site loop and changes in dynamics distant from the site of activity. Interestingly, the new structures identify AvrPiz-t, a secreted avirulence protein produced by the rice blast fungus, as a structural homolog to ToxB. This homology suggests that fungal proteins involved in either disease susceptibility such as ToxB or resistance such as AvrPiz-t may have a common evolutionary origin.
© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Host-Pathogen Interaction; Nuclear Magnetic Resonance (NMR); Pathogenesis; Protein Dynamic; Protein Structure; Toxin

Mesh:

Substances:

Year:  2014        PMID: 25063993      PMCID: PMC4162193          DOI: 10.1074/jbc.M114.569103

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  35 in total

1.  Ptr ToxA requires multiple motifs for complete activity.

Authors:  Viola A Manning; Rachael M Andrie; Aaron F Trippe; Lynda M Ciuffetti
Journal:  Mol Plant Microbe Interact       Date:  2004-05       Impact factor: 4.171

2.  Automated NMR structure calculation with CYANA.

Authors:  Peter Güntert
Journal:  Methods Mol Biol       Date:  2004

3.  Conversion of the enzyme guanylate kinase into a mitotic-spindle orienting protein by a single mutation that inhibits GMP-induced closing.

Authors:  Christopher A Johnston; Dustin S Whitney; Brian F Volkman; Chris Q Doe; Kenneth E Prehoda
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-11       Impact factor: 11.205

Review 4.  Host-selective toxins, Ptr ToxA and Ptr ToxB, as necrotrophic effectors in the Pyrenophora tritici-repentis-wheat interaction.

Authors:  Lynda M Ciuffetti; Viola A Manning; Iovanna Pandelova; Melania Figueroa Betts; J Patrick Martinez
Journal:  New Phytol       Date:  2010-07-14       Impact factor: 10.151

5.  The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.

Authors:  C Bartels; T H Xia; M Billeter; P Güntert; K Wüthrich
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

6.  13C NMR chemical shifts can predict disulfide bond formation.

Authors:  D Sharma; K Rajarathnam
Journal:  J Biomol NMR       Date:  2000-10       Impact factor: 2.835

7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

8.  A single gene encodes a selective toxin causal to the development of tan spot of wheat.

Authors:  L M Ciuffetti; R P Tuori; J M Gaventa
Journal:  Plant Cell       Date:  1997-02       Impact factor: 11.277

9.  Role of the arginyl-glycyl-aspartic motif in the action of Ptr ToxA produced by Pyrenophora tritici-repentis.

Authors:  Steven W Meinhardt; Weijun Cheng; Chil Y Kwon; Christine M Donohue; Jack B Rasmussen
Journal:  Plant Physiol       Date:  2002-11       Impact factor: 8.340

10.  ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures.

Authors:  Meytal Landau; Itay Mayrose; Yossi Rosenberg; Fabian Glaser; Eric Martz; Tal Pupko; Nir Ben-Tal
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

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  9 in total

1.  Solution structure of an avirulence protein, AVR-Pia, from Magnaporthe oryzae.

Authors:  Toyoyuki Ose; Azusa Oikawa; Yukiko Nakamura; Katsumi Maenaka; Yuya Higuchi; Yuki Satoh; Shiho Fujiwara; Makoto Demura; Teruo Sone; Masakatsu Kamiya
Journal:  J Biomol NMR       Date:  2015-09-11       Impact factor: 2.835

2.  Recognition of the Magnaporthe oryzae Effector AVR-Pia by the Decoy Domain of the Rice NLR Immune Receptor RGA5.

Authors:  Diana Ortiz; Karine de Guillen; Stella Cesari; Véronique Chalvon; Jérome Gracy; André Padilla; Thomas Kroj
Journal:  Plant Cell       Date:  2017-01-13       Impact factor: 11.277

3.  Residue-level global and local ensemble-ensemble comparisons of protein domains.

Authors:  Sarah A Clark; Dale E Tronrud; P Andrew Karplus
Journal:  Protein Sci       Date:  2015-06-22       Impact factor: 6.725

Review 4.  Effectors of Filamentous Plant Pathogens: Commonalities amid Diversity.

Authors:  Marina Franceschetti; Abbas Maqbool; Maximiliano J Jiménez-Dalmaroni; Helen G Pennington; Sophien Kamoun; Mark J Banfield
Journal:  Microbiol Mol Biol Rev       Date:  2017-03-29       Impact factor: 11.056

5.  Inverse gene-for-gene interactions contribute additively to tan spot susceptibility in wheat.

Authors:  Zhaohui Liu; Jason D Zurn; Gayan Kariyawasam; Justin D Faris; Gongjun Shi; Jana Hansen; Jack B Rasmussen; Maricelis Acevedo
Journal:  Theor Appl Genet       Date:  2017-03-14       Impact factor: 5.699

6.  Efficient production of (2)H, (13)C, (15)N-enriched industrial enzyme Rhizopus chinensis lipase with native disulfide bonds.

Authors:  Meng Zhang; Xiao-Wei Yu; G V T Swapna; Rong Xiao; Haiyan Zheng; Chong Sha; Yan Xu; Gaetano T Montelione
Journal:  Microb Cell Fact       Date:  2016-07-13       Impact factor: 5.328

7.  Remote homology clustering identifies lowly conserved families of effector proteins in plant-pathogenic fungi.

Authors:  Darcy A B Jones; Paula M Moolhuijzen; James K Hane
Journal:  Microb Genom       Date:  2021-09

8.  Structural basis of pathogen recognition by an integrated HMA domain in a plant NLR immune receptor.

Authors:  A Maqbool; H Saitoh; M Franceschetti; C E M Stevenson; A Uemura; H Kanzaki; S Kamoun; R Terauchi; M J Banfield
Journal:  Elife       Date:  2015-08-25       Impact factor: 8.140

9.  Structure Analysis Uncovers a Highly Diverse but Structurally Conserved Effector Family in Phytopathogenic Fungi.

Authors:  Karine de Guillen; Diana Ortiz-Vallejo; Jérome Gracy; Elisabeth Fournier; Thomas Kroj; André Padilla
Journal:  PLoS Pathog       Date:  2015-10-27       Impact factor: 6.823

  9 in total

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