| Literature DB >> 25061695 |
Keith C Coffman1, Huy H Nguyen, Puay-Wah Phuan, Brandi M Hudson, Gui J Yu, Alex L Bagdasarian, Deanna Montgomery, Michael W Lodewyk, Baoxue Yang, Choong L Yoo, A S Verkman, Dean J Tantillo, Mark J Kurth.
Abstract
Conformationally constrained bithiazoles were previously found to have improved efficacy over nonconstrained bithiazoles for correction of defective cellular processing of the ΔF508 mutant cystic fibrosis transmembrane conductance regulator (CFTR) protein. In this study, two sets of constrained bithiazoles were designed, synthesized, and tested in vitro using ΔF508-CFTR expressing epithelial cells. The SAR data demonstrated that modulating the constraining ring size between 7- versus 8-membered in these constrained bithiazole correctors did not significantly enhance their potency (IC50), but strongly affected maximum efficacy (Vmax), with constrained bithiazoles 9e and 10c increasing Vmax by 1.5-fold compared to benchmark bithiazole corr4a. The data suggest that the 7- and 8-membered constrained ring bithiazoles are similar in their ability to accommodate the requisite geometric constraints during protein binding.Entities:
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Year: 2014 PMID: 25061695 PMCID: PMC4136667 DOI: 10.1021/jm5007885
Source DB: PubMed Journal: J Med Chem ISSN: 0022-2623 Impact factor: 7.446
Figure 1Constrained bithiazole corrector 9a, lead corrector corr15jf, and benchmark corrector corr4a.
Figure 2Target analogues (1) of constrained bithiazole corrector 9a.
Figure 3Constrained bithiazole analogues 2–4.
Scheme 2(a) Synthesis of Constrained Bithiazole Amide Analogues 9a–f and 10a–f. (b) Synthesis of Constrained Bithiazole Aniline Analogues of 9g–j and 10g–j
Scheme 1(a) Synthesis of 1,3-Cycloheptadione. (b) Synthesis of 1,3-Cyclooctadione
Corrector Activities of Amide-Varied Constrained Bithiazoles 7a/8a and 9a–f/10a–f Relative to Bithiazole corr4a
| compound | IC50 (μM) | compound | IC50 (μM) | ||
|---|---|---|---|---|---|
| 351 | 11.0 | 592 | 9.2 | ||
| 336 | 2.3 | 512 | 4.1 | ||
| 473 | 8.9 | 247 | 4.5 | ||
| 329 | 5.8 | 717 | 8.7 | ||
| 447 | 6.6 | 286 | 2.9 | ||
| 678 | 8.8 | 481 | 8.3 | ||
| 505 | 4.8 | 467 | 6.6 | ||
Corrector activity of benchmark bithiazole corr4a.
Corrector Activities of Aniline-Varied Constrained Bithiazoles 9a/10a and 9g–j/10g–j Relative to Bithiazole corr4a
| compound | IC50 (μM) | compound | IC50 (μM) | ||
|---|---|---|---|---|---|
| 336 | 2.3 | 512 | 4.1 | ||
| 366 | 6.9 | 198 | 2.1 | ||
| 509 | 7.2 | 280 | 5.2 | ||
| 336 | 2.2 | 291 | 5.2 | ||
| 485 | 3.6 | 243 | 0.9 | ||
Corrector activity of benchmark bithiazole corr4a.
Figure 4Lowest energy conformers of 3, 9a, and 10a. Geometries and energies were computed with M06-2X/6-31+G(d,p) (selected distances are shown in Å; dihedral angles are shown for the central S–C–C–N substructure; see the Computational Methods section in Supporting Information for values and details). Top structures are the lowest energy conformers, whereas bottom structures are the second lowest energy conformers; free energies for the latter relative to the former (0.0 kcal/mol) are shown in kcal/mol.