Literature DB >> 12007216

Cystic fibrosis: a worldwide analysis of CFTR mutations--correlation with incidence data and application to screening.

Joseph L Bobadilla1, Milan Macek, Jason P Fine, Philip M Farrell.   

Abstract

Although there have been numerous reports from around the world of mutations in the gene of chromosome 7 known as CFTR (cystic fibrosis transmembrane conductance regulator), little attention has been given to integrating these mutant alleles into a global understanding of the population molecular genetics associated with cystic fibrosis (CF). We determined the distribution of CFTR mutations in as many regions throughout the world as possible in an effort designed to: 1) increase our understanding of ancestry-genotype relationships, 2) compare mutational arrays with disease incidence, and 3) gain insight for decisions regarding screening program enhancement through CFTR multi-mutational analyses. Information on all mutations that have been published since the identification and cloning of the CFTR gene's most common allele, DeltaF508 (or F508del), was reviewed and integrated into a centralized database. The data were then sorted and regional CFTR arrays were determined using mutations that appeared in a given region with a frequency of 0.5% or greater. Final analyses were based on 72,431 CF chromosomes, using data compiled from over 100 original papers, and over 80 regions from around the world, including all nations where CF has been studied using analytical molecular genetics. Initial results confirmed wide mutational heterogeneity throughout the world; however, characterization of the most common mutations across most populations was possible. We also examined CF incidence, DeltaF508 frequency, and regional mutational heterogeneity in a subset of populations. Data for these analyses were filtered for reliability and methodological strength before being incorporated into the final analysis. Statistical assessment of these variables revealed that there is a significant positive correlation between DeltaF508 frequency and the CF incidence levels of regional populations. Regional analyses were also performed to search for trends in the distribution of CFTR mutations across migrant and related populations; this led to clarification of ancestry-genotype patterns that can be used to design CFTR multi-mutation panels for CF screening programs. From comprehensive assessment of these data, we offer recommendations that multiple CFTR alleles should eventually be included to increase the sensitivity of newborn screening programs employing two-tier testing with trypsinogen and DNA analysis. Copyright 2002 Wiley-Liss, Inc.

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Year:  2002        PMID: 12007216     DOI: 10.1002/humu.10041

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  282 in total

1.  Functional abnormalities in the retinal pigment epithelium of CFTR mutant mice.

Authors:  Jiang Wu; Alan D Marmorstein; Neal S Peachey
Journal:  Exp Eye Res       Date:  2006-04-14       Impact factor: 3.467

2.  Impact of public health strategies on the birth prevalence of cystic fibrosis in Brittany, France.

Authors:  Virginie Scotet; Marie-Pierre Audrézet; Michel Roussey; Gilles Rault; Martine Blayau; Marc De Braekeleer; Claude Férec
Journal:  Hum Genet       Date:  2003-05-27       Impact factor: 4.132

Review 3.  Bayesian analysis and risk assessment in genetic counseling and testing.

Authors:  Shuji Ogino; Robert B Wilson
Journal:  J Mol Diagn       Date:  2004-02       Impact factor: 5.568

4.  Bayesian risk assessment for autosomal recessive diseases: fetal echogenic bowel with one or no detectable CFTR mutation.

Authors:  S Ogino; R B Wilson; W W Grody
Journal:  J Med Genet       Date:  2004-05       Impact factor: 6.318

5.  CFTR mutation analysis and haplotype associations in CF patients.

Authors:  S K Cordovado; M Hendrix; C N Greene; S Mochal; M C Earley; P M Farrell; M Kharrazi; W H Hannon; P W Mueller
Journal:  Mol Genet Metab       Date:  2011-10-26       Impact factor: 4.797

6.  Newborn screening for cystic fibrosis in Alberta: Two years of experience.

Authors:  Margaret Lilley; Susan Christian; Stacey Hume; Patrick Scott; Mark Montgomery; Lisa Semple; Peter Zuberbuhler; Joan Tabak; Fiona Bamforth; Martin J Somerville
Journal:  Paediatr Child Health       Date:  2010-11       Impact factor: 2.253

7.  Pharmacogenomics: mapping monogenic mutations to direct therapy.

Authors:  Palmer Taylor
Journal:  J Clin Invest       Date:  2012-06-25       Impact factor: 14.808

8.  Pyrazolylthiazole as DeltaF508-cystic fibrosis transmembrane conductance regulator correctors with improved hydrophilicity compared to bithiazoles.

Authors:  Long Ye; John M Knapp; Panjamaporn Sangwung; James C Fettinger; A S Verkman; Mark J Kurth
Journal:  J Med Chem       Date:  2010-05-13       Impact factor: 7.446

9.  Direct interaction of a CFTR potentiator and a CFTR corrector with phospholipid bilayers.

Authors:  Debora Baroni; Olga Zegarra-Moran; Agneta Svensson; Oscar Moran
Journal:  Eur Biophys J       Date:  2014-04-26       Impact factor: 1.733

10.  Structure of nucleotide-binding domain 1 of the cystic fibrosis transmembrane conductance regulator.

Authors:  Hal A Lewis; Sean G Buchanan; Stephen K Burley; Kris Conners; Mark Dickey; Michael Dorwart; Richard Fowler; Xia Gao; William B Guggino; Wayne A Hendrickson; John F Hunt; Margaret C Kearins; Don Lorimer; Peter C Maloney; Kai W Post; Kanagalaghatta R Rajashankar; Marc E Rutter; J Michael Sauder; Stephanie Shriver; Patrick H Thibodeau; Philip J Thomas; Marie Zhang; Xun Zhao; Spencer Emtage
Journal:  EMBO J       Date:  2003-12-18       Impact factor: 11.598

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