| Literature DB >> 25047223 |
Anne Benard, Inès J Goossens-Beumer, Anneke Q van Hoesel, Wouter de Graaf, Hamed Horati, Hein Putter, Eliane C M Zeestraten, Cornelis J H van de Velde, Peter J K Kuppen1.
Abstract
BACKGROUND: Post-translational modification of histone tails by methylation plays an important role in tumorigenesis. In this study, we investigated the nuclear expression of H3K4me3, H3K9me3 and H4K20me3 in early-stage colon cancer in relation to clinical outcome.Entities:
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Year: 2014 PMID: 25047223 PMCID: PMC4223547 DOI: 10.1186/1471-2407-14-531
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Patient characteristics of the study cohort
| | ||||
|---|---|---|---|---|
| Age at randomization | | | | |
| <50 | 32 | 12.6 | 11 | 9.1 |
| 50-75 | 161 | 63.4 | 80 | 66.1 |
| >75 | 61 | 24 | 30 | 24.8 |
| Gender | | | ||
| Male | 128 | 50.4 | 61 | 50.4 |
| Female | 126 | 49.6 | 60 | 49.6 |
| TNM stage | | | ||
| I | 53 | 20.9 | 30 | 24.8 |
| II | 113 | 44.5 | 91 | 75.2 |
| III | 88 | 34.6 | | |
| Tumor location | | | | |
| Colon | 187 | 73.6 | 121 | 100 |
| Rectum | 67 | 26.4 | | |
| Tumor size | | | ||
| Mean | 4.69 | 4.57 | ||
| Standard error | 2.32 | 0.21 | ||
| MSS status | | | | |
| MSS | 175 | 68.9 | 20 | 16.5 |
| MSI | 34 | 13.4 | 75 | 62 |
| Unknown | 45 | 17.7 | 26 | 21.5 |
| Tumor in follow up | | | | |
| No | 215 | 84.6 | 105 | 86.8 |
| Yes | 39 | 15.4 | 16 | 13.2 |
| Adjuvant therapy | | | | |
| No | 206 | 81.1 | 117 | 96.7 |
| Yes | 48 | 18.9 | 4 | 3.3 |
Patient characteristics are shown for both the study cohort (n = 254) and the patients with TNM stage I and II colon cancer as used for the statistical analyses (n = 121). Patient selection was based on availability of FFPE tissues, available data for all three markers, and information about the listed covariables. The study cohort selection was representative for the entire colorectal cancer series.
Figure 1Correct identification of positively stained and negative nuclei for each individual marker. The Ariol system trainer overlay shows correct identification of positive (indicated by yellow dots) and negative (blue dots) nuclei in tumor tissues. TMA slides were scanned using a 20x magnification. Shown for all individual markers are positively stained nuclei (top row) and negative tumor cores (bottom row).
Figure 2Nuclear expression of individual markers. (A). Displayed are differences in nuclear expression, measured as the percentage of positively stained nuclei (y-axis), between normal and tumor tissues (n = 29). Boxplots show the median and range of expression of each of the individual markers in normal (N) and tumor (T) samples (x-axis). P-values represent statistical differences between normal and tumor samples, calculated using the Wilcoxon signed rank test. (B). Cumulative incidence curves, accounting for competing risks, showing the difference in survival between high and low expression groups of each of the individual markers. 5-year survival rates are included as percentages (in gray); p-values represent the statistical differences between the two patient groups in multivariate analyses. Numbers of patients in each group are indicated in each figure (n).
Survival analyses single markers in TNM stage I and II colon cancer patients
| p-value | 0.4 | ||||
| | HR | 1.26 | 4.45 | 3.54 | 3.63 |
| | (95% CI) | (0.75-2.11) | (1.29-15.38) | (1.32-9.49) | (1.36-9.73) |
| p-value | 0.3 | ||||
| | HR | 1.36 | 3.79 | 3.86 | 3.57 |
| | (95% CI) | (0.79-2.33) | (1.06-13.56) | (1.38-10.77) | (1.29-9.81) |
| Low expression | 73% | 95% | 93% | 94% | |
| High expression | 76% | 82% | 74% | 77% | |
| p-value | |||||
| | HR | 0.61 | 0.30 | 0.47 | 0.36 |
| | (95% CI) | (0.36-1.04) | (0.12-0.86) | (0.21-1.08) | (0.16-0.85) |
| p-value | 0.2 | ||||
| | HR | 0.69 | 0.26 | 0.42 | 0.29 |
| | (95% CI) | (0.39-1.24) | (0.09-0.77) | (0.17-1.01) | (0.12-0.75) |
| Low expression | 64% | 78% | 71% | 74% | |
| High expression | 86% | 96% | 92% | 92% | |
| p-value | 0.1 | ||||
| | HR | 0.67 | 0.24 | 0.34 | 0.41 |
| | (95% CI) | (0.40-1.12) | (0.08-0.72) | (0.14-0.81) | (0.18-0.95) |
| p-value | |||||
| | HR | 0.51 | 0.21 | 0.29 | 0.31 |
| | (95% CI) | (0.29-0.89) | (0.06-0.67) | (0.12-0.72) | (0.13-0.77) |
| Low expression | 67% | 80% | 74% | 77% | |
| High expression | 80% | 94% | 90% | 91% | |
Shown are the results of the univariate and multivariate analyses of all individual markers in TNM stage I and II colon cancer patients, with all p-values and hazard ratios (HR) with their 95% confidence intervals (95% CI). OS = overall survival, DSS = disease-specific survival, LRRFS = locoregional recurrence free survival, DRFS = distant recurrence free survival. The low expression group (below-median expression) was used as reference group. 5-year survival rates are given for both low and high expression groups. Statistically significant differences (defined as p < 0.05) are shown in bold, trends (p < 0.1) in Italic.
Figure 3Univariate and multivariate trend analyses of all markers combined. (A). Results of the univariate and multivariate trend analyses of combined markers H3K4me3, H3K9me3, and H4K20me3. HR represents the hazard ratio for each unit of increase, thus each additional marker showing unfavorable expression. 95% CI: 95% confidence interval for each HR. OS: overall survival; DSS: disease-specific survival; LRRFS: locoregional recurrence-free survival; DRFS: distant recurrence-free survival. (B). Kaplan-Meier curves are shown for OS, including the number of patients in each patient group (n), based on the number of markers showing unfavorable expression. Patients were divided into the following groups: all favorable (group 1; H3K4me3 low and both H3K9me3 and H4K20me3 high), one out of three unfavorable (group 2), two out of three unfavorable (group 3), and all unfavorable (group 4; H3K4me3 high and both H3K9me3 and H4K20me3 low). Cumulative incidence curves, accounting for competing risks, are shown for DSS, LRRFS and DRFS. Multivariate p-values have been included in each of the combined marker graphs.