Literature DB >> 25026099

Solid-state NMR shows that dynamically different domains of membrane proteins have different hydration dependence.

Zhengfeng Zhang1, Yanke Chen, Xinqi Tang, Jianping Li, Liying Wang, Jun Yang.   

Abstract

Hydration has a profound influence on the structure, dynamics, and functions of membrane and membrane-embedded proteins. So far the hydration response of molecular dynamics of membrane proteins in lipid bilayers is poorly understood. Here, we reveal different hydration dependence of the dynamics in dynamically different domains of membrane proteins by multidimensional magic angle spinning (MAS) solid-state NMR (ssNMR) spectroscopy using 121-residue integral diacylglycerol kinase (DAGK) in 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC)/1,2-dimyristoyl-sn-glycero-3-phospho-(1'-rac-glycerol) (DMPG) lipid bilayers as a model system. The highly mobile and immobile domains of DAGK and their water accessibilities are identified site-specifically by scalar- and dipolar-coupling based MAS ssNMR experiments, respectively. Our experiments reveal different hydration dependence of the dynamics in highly mobile and immobile domains of membrane proteins. We demonstrate that the fast, large-amplitude motions in highly mobile domains are not triggered until 20% hydration, enhanced at 20-50% hydration and unchanged at above 50% hydration. In contrast, motions on submicrosecond time scale of immobile residues are observed to be independent of the hydration levels in gel phase of lipids, and at the temperature near gel-liquid crystalline phase transition, amplitude of whole-molecule rotations around the bilayer normal is dominated by the fluidity of lipid bilayers, which is strongly hydration dependent. The hydration dependence of the dynamics of DAGK revealed by this study provides new insights into the correlations of hydration to dynamics and function of membrane proteins in lipid bilayers.

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Year:  2014        PMID: 25026099     DOI: 10.1021/jp503032h

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  4 in total

1.  Probing Residue-Specific Water-Protein Interactions in Oriented Lipid Membranes via Solid-State NMR Spectroscopy.

Authors:  Alysha Dicke; T Gopinath; Yingjie Wang; Gianluigi Veglia
Journal:  J Phys Chem B       Date:  2016-10-18       Impact factor: 2.991

2.  On the use of ultracentrifugal devices for routine sample preparation in biomolecular magic-angle-spinning NMR.

Authors:  Abhishek Mandal; Jennifer C Boatz; Travis B Wheeler; Patrick C A van der Wel
Journal:  J Biomol NMR       Date:  2017-02-22       Impact factor: 2.835

3.  Global response of diacylglycerol kinase towards substrate binding observed by 2D and 3D MAS NMR.

Authors:  Kristin Möbius; Sina Kazemi; Peter Güntert; Andreas Jakob; Alexander Heckel; Johanna Becker-Baldus; Clemens Glaubitz
Journal:  Sci Rep       Date:  2019-03-08       Impact factor: 4.379

4.  Structure of membrane diacylglycerol kinase in lipid bilayers.

Authors:  Jianping Li; Yang Shen; Yanke Chen; Zhengfeng Zhang; Shaojie Ma; Qianfen Wan; Qiong Tong; Clemens Glaubitz; Maili Liu; Jun Yang
Journal:  Commun Biol       Date:  2021-03-05
  4 in total

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