Literature DB >> 25007098

DNA base detection using a single-layer MoS2.

Amir Barati Farimani1, Kyoungmin Min, Narayana R Aluru.   

Abstract

Nanopore-based DNA sequencing has led to fast and high-resolution recognition and detection of DNA bases. Solid-state and biological nanopores have low signal-to-noise ratio (SNR) (< 10) and are generally too thick (> 5 nm) to be able to read at single-base resolution. A nanopore in graphene, a 2-D material with sub-nanometer thickness, has a SNR of ∼3 under DNA ionic current. In this report, using atomistic and quantum simulations, we find that a single-layer MoS2 is an extraordinary material (with a SNR > 15) for DNA sequencing by two competing technologies (i.e., nanopore and nanochannel). A MoS2 nanopore shows four distinct ionic current signals for single-nucleobase detection with low noise. In addition, a single-layer MoS2 shows a characteristic change/response in the total density of states for each base. The band gap of MoS2 is significantly changed compared to other nanomaterials (e.g., graphene, h-BN, and silicon nanowire) when bases are placed on top of the pristine MoS2 and armchair MoS2 nanoribbon, thus making MoS2 a promising material for base detection via transverse current tunneling measurement. MoS2 nanopore benefits from a craftable pore architecture (combination of Mo and S atoms at the edge) which can be engineered to obtain the optimum sequencing signals.

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Year:  2014        PMID: 25007098     DOI: 10.1021/nn5029295

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  47 in total

1.  News Feature: Beyond graphene.

Authors:  Stephen Ornes
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-27       Impact factor: 11.205

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3.  Single-layer MoS2 nanopores as nanopower generators.

Authors:  Jiandong Feng; Michael Graf; Ke Liu; Dmitry Ovchinnikov; Dumitru Dumcenco; Mohammad Heiranian; Vishal Nandigana; Narayana R Aluru; Andras Kis; Aleksandra Radenovic
Journal:  Nature       Date:  2016-07-13       Impact factor: 49.962

4.  Observation of ionic Coulomb blockade in nanopores.

Authors:  Jiandong Feng; Ke Liu; Michael Graf; Dumitru Dumcenco; Andras Kis; Massimiliano Di Ventra; Aleksandra Radenovic
Journal:  Nat Mater       Date:  2016-03-28       Impact factor: 43.841

5.  Classification of DNA nucleotides with transverse tunneling currents.

Authors:  Jonas Nyvold Pedersen; Paul Boynton; Massimiliano Di Ventra; Antti-Pekka Jauho; Henrik Flyvbjerg
Journal:  Nanotechnology       Date:  2016-11-29       Impact factor: 3.874

6.  MOSAIC: A Modular Single-Molecule Analysis Interface for Decoding Multistate Nanopore Data.

Authors:  Jacob H Forstater; Kyle Briggs; Joseph W F Robertson; Jessica Ettedgui; Olivier Marie-Rose; Canute Vaz; John J Kasianowicz; Vincent Tabard-Cossa; Arvind Balijepalli
Journal:  Anal Chem       Date:  2016-11-15       Impact factor: 6.986

Review 7.  Integrating Artificial Intelligence and Nanotechnology for Precision Cancer Medicine.

Authors:  Omer Adir; Maria Poley; Gal Chen; Sahar Froim; Nitzan Krinsky; Jeny Shklover; Janna Shainsky-Roitman; Twan Lammers; Avi Schroeder
Journal:  Adv Mater       Date:  2019-07-09       Impact factor: 30.849

8.  High-throughput RNA sequencing reveals structural differences of orthologous brain-expressed genes between western lowland gorillas and humans.

Authors:  Leonard Lipovich; Zhuo-Cheng Hou; Hui Jia; Christopher Sinkler; Michael McGowen; Kirstin N Sterner; Amy Weckle; Amara B Sugalski; Lenore Pipes; Domenico L Gatti; Christopher E Mason; Chet C Sherwood; Patrick R Hof; Christopher W Kuzawa; Lawrence I Grossman; Morris Goodman; Derek E Wildman
Journal:  J Comp Neurol       Date:  2015-08-20       Impact factor: 3.215

9.  Detection and Mapping of DNA Methylation with 2D Material Nanopores.

Authors:  Hu Qiu; Aditya Sarathy; Klaus Schulten; Jean-Pierre Leburton
Journal:  NPJ 2D Mater Appl       Date:  2017-04-11

10.  Raman Shifts in Electron-Irradiated Monolayer MoS2.

Authors:  William M Parkin; Adrian Balan; Liangbo Liang; Paul Masih Das; Michael Lamparski; Carl H Naylor; Julio A Rodríguez-Manzo; A T Charlie Johnson; Vincent Meunier; Marija Drndić
Journal:  ACS Nano       Date:  2016-03-25       Impact factor: 15.881

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