| Literature DB >> 24988069 |
Adrián Gutiérrez-Cepeda1, Antonio Hernández Daranas2, José J Fernández3, Manuel Norte4, María L Souto5.
Abstract
Five-membered rings are of particular interest, due to their presence in some of the most common molecules in chemistry and biology. Despite their apparent simplicity, the structural resolution of these rings is complex, due to their inherent conformational flexibility. Here, we describe an application of a recently reported simple and efficient NMR protocol based on the measurement of spin-spin coupling constants to achieve the challenging relative configurations of five new halogenated C15 tetrahydrofuranyl-acetogenins, marilzafurollenes A-D (1-4) and 12-acetoxy-marilzafurenyne (5), isolated from the red alga, Laurencia marilzae. Although DFT chemical shift calculations were used to connect remote stereocenters, the NMR-based approach seems advantageous over computational techniques in this context, as the presence of halogens may interfere with reliable calculations.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24988069 PMCID: PMC4113813 DOI: 10.3390/md12074031
Source DB: PubMed Journal: Mar Drugs ISSN: 1660-3397 Impact factor: 5.118
Figure 1The structures of the new metabolites.
13C NMR (150 MHz) data for compounds 1–5 in CDCl3 (δ (ppm)).
| C | 1 | 2 | 3 | 4 | 5 |
|---|---|---|---|---|---|
| 1 | 74.9, CH | 74.8, CH | 74.8, CH | 74.8, CH | 77.0, CH |
| 2 | 200.6, C | 200.6, C | 200.8, C | 200.6, C | 82.0, C |
| 3 | 104.1, CH | 104.1, CH | 104.2, CH | 104.1, CH | 111.9, CH |
| 4 | 66.4, CH | 66.5, CH | 66.6, CH | 66.6, CH | 140.7, CH |
| 5 | 38.3, CH2 | 38.1, CH2 | 38.2, CH2 | 38.2, CH2 | 35.0, CH2 |
| 6 | 80.0, CH | 79.7, CH | 79.8, CH | 79.8, CH | 82.1, CH |
| 7 | 63.2, CH | 63.3, CH | 63.4, CH | 63.4, CH | 62.3, CH |
| 8 | 40.9, CH2 | 40.7, CH2 | 40.9, CH2 | 41.1, CH2 | 41.0, CH2 |
| 9 | 79.1, CH | 79.1, CH | 79.1, CH | 80.0, CH | 79.6, CH |
| 10 | 55.6, CH | 57.3, CH | 57.9, CH | 56.2, CH | 54.8, CH |
| 11 | 38.5, CH2 | 38.5, CH2 | 38.4, CH2 | 43.1, CH2 | 40.8, CH2 |
| 12 | 143.2, CH | 126.2, CH | 128.5, CH | 70.4, CH | 72.8, CH |
| 13 | 133.4, CH | 137.6, CH | 135.8, CH | 133.3, CH | 128.7, CH |
| 14 | 198.5, C | 68.5, CH | 77.7, CH | 127.5, CH | 130.0, CH |
| 15 | 27.3, CH3 | 23.4, CH3 | 21.3, CH3 | 17.7, CH3 | 17.8, CH3 |
| OCH3 | 56.0, CH3 | ||||
| CO(Ac) | 170.2, C | ||||
| CH3(Ac) | 21.3, CH3 |
1H NMR (600 MHz) data for marilzafurollenes A–C (1–3) in CDCl3 (δ (ppm)).
| C | Marilzafurollene A (1) | Marilzafurollene B (2) | Marilzafurollene C (3) |
|---|---|---|---|
| 1 | 6.13, dd (2.2, 5.6) | 6.13, dd (2.2, 5.7) | 6.13, ddd (1.5, 2.2, 5.6) |
| 3 | 5.52, dd (5.6, 5.6) | 5.52, dd (5.5, 5.7) | 5.53, dd (5.6, 5.6) |
| 4 | 4.56, ddd (3.6, 5.6, 8.2) | 4.57, ddd (3.6, 5.5, 7.7) | 4.57, ddd (3.4, 5.6, 8.0) |
| 5 | 2.13, ddd (3.6, 8.8, 14.4) | 2.15, ddd (3.6, 9.1, 14.5) | 2.14, ddd (3.4, 8.7, 14.0) |
| 1.88, ddd (3.6, 8.2, 14.4) | 1.86, ddd (3.5, 7.7, 14.5) | 1.87, ddd (3.1, 8.0, 14.0) | |
| 6 | 4.48, ddd (3.0, 3.6, 8.8) | 4.46, ddd (3.3, 3.5, 9.1) | 4.46, ddd (2.5, 3.1, 8.7) |
| 7 | 4.55, ddd (0.8, 3.0, 4.8) | 4.53, ddd (0.8, 3.3, 4.8) | 4.54, ddd (2.5, 3.4, 4.5) |
| 8 | α 2.55, ddd (4.8, 9.6, 13.9) | α 2.52, ddd (4.8, 9.6, 13.9) | α 2.52, ddd (4.5, 8.9, 14.1) |
| β 2.42, ddd (0.8, 6.2, 13.9) | β 2.39, ddd (0.8, 6.2, 13.9) | β 2.39, ddd (3.4, 6.3, 14.1) | |
| 9 | 4.46, ddd (3.0, 6.2, 9.6) | 4.47, ddd (3.1, 6.2, 9.6) | 4.47, ddd (3.4, 6.3, 8.3) |
| 10 | 4.10, ddd (3.0, 5.2, 8.5) | 4.06, ddd (3.1, 5.7, 7.9) | 4.03, ddd (3.4, 4.6, 8.6) |
| 11 | 2.90, m (2H) | 2.70, m (2H) | 2.71, m (2H) |
| 12 | 6.83, ddd (7.0, 7.0, 15.9) | 5.72, ddd (6.4, 7.0, 15.6) | 5.67, ddd (7.0, 7.2, 15.5) |
| 13 | 6.18, br d (15.9) | 5.65, br dd (6.1, 15.6) | 5.48, dddd (1.5, 1.5, 6.8, 15.5) |
| 14 | 4.30, dd (6.1, 6.3) | 3.72, dd (6.6, 6.8) | |
| 15 | 2.28, s (3H) | 1.28, d (6.3) (3H) | 1.24, d (6.5) (3H) |
| OCH3 | 3.28, s (3H) |
Figure 2Representative section of the HSQC-HECADE spectrum (600 MHz, CDCl3, see Supplementary Figure S7), calculated JC,H values and configuration analysis for the oxolane ring of marilzafurollene A (1).
Figure 3J-based configuration analysis for the (A) C-9/C-10 and (B) C-4/C-6 fragments of marilzafurollene A (1).
Figure 41H correlations between calculated isotropic shieldings and experimentally observed chemical shifts for the two studied diastereoisomers of marilzafurollene A (1). Fitting parameters are indicated.
1H NMR (600 MHz) data for compounds 4 and 5 in CDCl3 (δ (ppm)).
| C | Marilzafurollene D (4) | 12-Acetoxy-marilzafurenyne (5) |
|---|---|---|
| 1 | 6.12, dd (2.1, 5.6) | 2.84, br d (1.7) |
| 3 | 5.52, dd (5.6, 5.6) | 5.64, dd (1.7, 16.1) |
| 4 | 4.57, ddd (3.7, 5.6, 7.8) | 6.20, ddd (7.4, 7.4, 16.1) |
| 5 | 2.15, ddd (3.7, 8.9, 14.3) | 2.60, ddd (6.8, 7.4, 14.7) |
| 1.87, ddd (3.6, 7.8, 14.3) | 2.50, ddd (6.8, 7.4, 14.7) | |
| 6 | 4.47, ddd (3.4, 3.6, 8.9) | 4.19, ddd (2.8, 6.8, 6.8) |
| 7 | 4.54, dd (3.4, 4.5) | 4.49, dd (2.8, 4.8) |
| 8 | α 2.56, ddd (4.5, 9.5, 13.9) | α 2.56, ddd (4.8, 9.8, 13.9) |
| β 2.40, dd (6.2, 13.9) | β 2.38, dd (6.1, 13.9) | |
| 9 | 4.42, ddd (2.8, 6.2, 9.5) | 4.39 ddd (2.5, 6.1, 9.8) |
| 10 | 4.35, ddd (2.8, 2.8, 11.3) | 4.05 ddd (2.5, 3.1, 10.7) |
| 11 | 2.09, ddd (3.4, 11.3, 15.0) | 2.22, ddd (3.3, 10.7, 14.3) |
| 1.91, ddd (2.8, 8.9, 15.0) | 2.17, ddd (3.1, 9.8, 14.3) | |
| 12 | 4.41, ddd (3.4, 6.7, 8.9) | 5.48, ddd (3.3, 7.0, 9.8) |
| 13 | 5.54, br dd (6.7, 15.2) | 5.43, br dd (7.0, 15.1) |
| 14 | 5.74, dq (6.4, 15.2) | 5.80, dq (6.5, 15.1) |
| 15 | 1.70, d (6.4) (3H) | 1.69, br d (6.5) (3H) |
| CH3(Ac) | 2.05, s (3H) |
Figure 5(A) Configuration analysis for the oxolane ring; (B) C-9/C-10; (C) C-10/C-12; and (D) C-4/C-6 fragments of marilzafurollene D (4).
Scheme 1Suggested biogenesis of marilzafurollenes A–D (1–4) and 12-acetoxy-marilzafurenyne (5).