Literature DB >> 24973301

Proline might have been the first amino acid in the primitive genetic code.

Reina Komatsu1, Risa Sawada, Takuya Umehara, Koji Tamura.   

Abstract

Stereochemical assignment of amino acids and corresponding codons or anticodons has not been successful so far. Here, we focused on proline and GGG (anticodon of tRNA(Pro)) and investigated their mutual interaction. Circular dichroism spectroscopy revealed that guanosine nucleotides (GG, GGG) formed G-quartet structures. The structures were destroyed by adding high concentrations of proline. We propose that the possibility of the reversible proline/G-quartet interaction could have contributed to the specific assignment of proline on GGG and that this coding could have been the first in the genetic code.

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Year:  2014        PMID: 24973301     DOI: 10.1007/s00239-014-9629-9

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  18 in total

1.  Hairpin and parallel quartet structures for telomeric sequences.

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Journal:  Nucleic Acids Res       Date:  1992-08-11       Impact factor: 16.971

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Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-14       Impact factor: 11.205

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Journal:  J Mol Evol       Date:  1998-07       Impact factor: 2.395

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Authors:  J Jurka; T F Smith
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

5.  Genetic code evolution started with the incorporation of glycine, followed by other small hydrophilic amino acids.

Authors:  Harold S Bernhardt; Wayne M Patrick
Journal:  J Mol Evol       Date:  2014-06-12       Impact factor: 2.395

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Journal:  Orig Life       Date:  1983-03

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Authors:  M Shimizu
Journal:  J Mol Evol       Date:  1982       Impact factor: 2.395

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Authors:  M Eigen; P Schuster
Journal:  Naturwissenschaften       Date:  1977-11

9.  Proline inhibits aggregation during protein refolding.

Authors:  D Samuel; T K Kumar; G Ganesh; G Jayaraman; P W Yang; M M Chang; V D Trivedi; S L Wang; K C Hwang; D K Chang; C Yu
Journal:  Protein Sci       Date:  2000-02       Impact factor: 6.725

10.  Monovalent cation induced structural transitions in telomeric DNAs: G-DNA folding intermediates.

Authors:  C C Hardin; E Henderson; T Watson; J K Prosser
Journal:  Biochemistry       Date:  1991-05-07       Impact factor: 3.162

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  3 in total

1.  Beyond the Frozen Accident: Glycine Assignment in the Genetic Code.

Authors:  Koji Tamura
Journal:  J Mol Evol       Date:  2015-08-20       Impact factor: 2.395

2.  Origin of the Genetic Code Is Found at the Transition between a Thioester World of Peptides and the Phosphoester World of Polynucleotides.

Authors:  Hyman Hartman; Temple F Smith
Journal:  Life (Basel)       Date:  2019-08-22

Review 3.  Origins and Early Evolution of the tRNA Molecule.

Authors:  Koji Tamura
Journal:  Life (Basel)       Date:  2015-12-03
  3 in total

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