| Literature DB >> 24971639 |
Haiyan Wang1, Guanghui Zhao2, Gongyi Chen3, Fuchun Jian4, Sumei Zhang4, Chao Feng4, Rongjun Wang4, Jinfeng Zhu3, Haiju Dong4, Jun Hua3, Ming Wang5, Longxian Zhang4.
Abstract
Giardia duodenalis is a common and widespread intestinal protozoan parasite of both humans and animals. Previous epidemiological and molecular studies have identified Giardia infections in different animals and humans, but only limited information is available about the occurrence and genotypes of Giardia in cattle in China. In this study, we determined the occurrence of giardiasis and genetically characterized G. duodenalis in dairy cattle in Henan Province, central China. The overall prevalence of G. duodenalis was 7.2% (128/1777) on microscopic analysis, with the highest infection rate (22.7%) in calves aged less than 1 month. G. duodenalis assemblages and subtypes were identified with multilocus genotyping based on the SSU rRNA, β-giardin (bg), glutamate dehydrogenase (gdh), and triosephosphate isomerase (tpi) genes. Two assemblages were detected in the successfully sequenced samples: assemblage A (n = 58), assemblage E (n = 21), with a mixed E and A assemblage (n = 2). Four novel subtypes of the gdh gene and seven of the bg gene were found among the G. duodenalis assemblage E isolates. Using the nomenclature for the multilocus genotype (MLG) model, nine novel multilocus genotypes E (MLGs E1-E9) and three MLGs A (a novel subtype AI, previously detected subtype AII-1, and a combination of both) were identified. MLG AII-1 identified in this study may be an important zoonotic subtype. The dairy cattle in Henan are a potential public health concern.Entities:
Mesh:
Year: 2014 PMID: 24971639 PMCID: PMC4074110 DOI: 10.1371/journal.pone.0100453
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Specific locations at which samples were collected in this study. ▴ locations.
Prevalence of G. duodenalis infection on 15 dairy cattle farms in Henan Province.
| No. of Positive/No. of Examined (95% CI) | ||||||||
| Age groups (day) | ||||||||
| Cities | Farms | <30 | 31–60 | 61–90 | 91–180 | 181–360 | >361 | Total |
| Zhengzhou | Zz-1 | 14/62 | 11/34 | 8/31 | 3/46 | 0/51 | 0/100 | 36/324 (11.1±1.0) |
| Zz-2 | 14/40 | 4/33 | 4/16 | 4/17 | 0/35 | 0/40 | 26/181 (14.4±1.7) | |
| Zz-3 | 2/3 | 1/26 | 0/16 | 2/17 | 0/11 | 0/135 | 5/208 (2.4±1.0) | |
| Zz-4 | 0 | 1/20 | 0 | 1/6 | 0/27 | 0/35 | 2/88 (2.3±1.8) | |
| Zz-5 | 0/5 | 0/11 | 0 | 0 | 0 | 0/32 | 0/48 (0) | |
| Zz-6 | 0 | 0/12 | 1/12 | 0/11 | 0 | 0/25 | 1/60 (1.7±2.3) | |
| Zz-7 | 0/1 | 0/10 | 0/5 | 0/5 | 0 | 0/27 | 0/48 (0) | |
| Zz-8 | 1/6 | 0/2 | 0 | 1/10 | 0 | 0/27 | 2/45 (4.4±3.6) | |
| Luoyang | Ly-1 | 4/30 | 16/62 | 7/44 | 1/56 | 0/15 | 0/34 | 28/241 (11.6±1.3) |
| Xinxiang | Xx-1 | 4/16 | 1/21 | 0/26 | 4/56 | 0/20 | 0/45 | 9/184 (4.9±1.3) |
| Jiaozuo | Jz-1 | 1/7 | 0 | 0 | 0/13 | 0/12 | 0/16 | 1/48 (2.1±2.9) |
| Jz-2 | 2/14 | 1/31 | 0/6 | 0/14 | 0/14 | 0/23 | 3/102 (2.9±1.8) | |
| Jz-3 | 2/6 | 2/15 | 1/13 | 0/13 | 1/22 | 0/25 | 6/94 (6.4±2.3) | |
| Shangqiu | Sq-1 | 5/26 | 3/12 | 0/4 | 0/10 | 0/12 | 0/32 | 8/96 (8.3±2.4) |
| Sq-2 | 0 | 0 | 0 | 0/7 | 1/25 | 0/26 | 1/58 (1.7±2.4) | |
| Total | 49/216 (22.7±1.6) | 40/289 (13.8±1.2) | 21/173 (12.1±1.7) | 16/281 (5.7±1.0) | 2/244 (0.8±0.6) | 0/622 (0) | 128/1777 (7.2±0.2) | |
Target, primers, amplicon size, annealing temperature, and main use of the four G. duodenalis genotyping loci.
| gene | Primer (sequence 5′–3′) | Fragment length (bp) | Annealing temperature (°C) | Usage(s) | References |
| 16S rRNA | Gia2029 ( | 292 | 55 | genotyping | 9 |
| Gia2150c( | |||||
| RH11( | 59 | ||||
| RH4( | |||||
| bg | G7( | 384 | 65 | Genotyping and subtyping | 24 |
| G759( | |||||
| G759( | 65 | ||||
| G376( | |||||
| gdh | Ghd1 ( | 520 | 50 | Genotyping and subtyping | 25 |
| Gdh2 ( | |||||
| Gdh3 ( | 50 | ||||
| Gdh4 ( | |||||
| tpi | AL3543 ( | 530 | 50 | Genotyping and subtyping | 26 |
| AL3546 ( | |||||
| AL3544 ( | 50 | ||||
| AL3545 ( |
Figure 2Prevalence of G. duodenalis infections in dairy cattle in different months.
Genotype distributions of the 16s rRNA, bg, gdh, and tpi gene sequences.
| SSU rRNA | tpi | bg | gdh | Total |
| E | E | E | E | 38 |
| NR | E | NR | 3 | |
| NR | NR | E | 3 | |
| NR | E | NR | 8 | |
| NR | E | E | NR | 6 |
| A | E | A | 2 | |
| A | A | A | A | 18 |
| A | NR | NR | 1 | |
| A | A | NR | 2 |
NR: no result.
Intrasubtype substitutions in tpi and gdh of assemblage E.
| Subtypes (numbers) | Nucleotide positions and substitutions | GenBank accession nos. | |||||||
| 19 | 24 | 119 | 132 | 269 | 273 | 299 | |||
| bg | |||||||||
| Ref. sequence | C | A | A | T | G | T | C | AY072729 | |
| E1 (9) | T | G | G | _ | _ | C | _ | KF843932 | |
| E2 (3) | T | G | G | C | _ | _ | _ | KF843933 | |
| E3 (7) | T | G | G | _ | _ | C | _ | KF843934 | |
| E4 (22) | T | G | G | _ | A | _ | T | KF843935 | |
| E5 (8) | T | G | G | _ | _ | _ | T | KF843936 | |
| E6 (2) | T | G | G | _ | _ | C | T | KF843937 | |
| E7 (6) | T | G | G | _ | _ | _ | _ | KF843938 | |
Figure 3Frequency distribution of G. duodenalis assemblage E and assemblage A across different age groups.
Sixteen, thirteen, twenty-two, six, and one of fifty-egiht G. duodenalis assemblage E isolates were grouped into calves aged <30 days, 31–60 days, 61–90 days, 91–180 days, and >180 days, respectively. Twelve, four, two, three, and zero of twenty-one G. duodenalis assemblage A isolates were grouped into the corresponding groups.
Multilocus characterization of G. duodenalis isolates from dairy cattle based on the sequences of the bg, gdh, and tpi genes.
| Isolates (numbers) | Reference sequences for bg, gdh and tpi genes | MLG types | |
| Genotypes | GenBank accession nos. | ||
| Fy32 | AII, AII, AII | AY072723, EF507674, U57897 | AII-1 |
| Xx1 | AI, AI, AI | AY655702, AB159795, L02120 | A novel |
| Fy16 (1) | AII, AI, AI | AY072723, AB159795, L02120 | Mixed |
| Swesheep055 | AI, AI, AI | X14185, EF507610, L02120 | AI-1 |
| ISSGCat4 | AI, AI, AI | AB469365, M84604, AB509383 | AI-2 |
| ISSGd168 | AII, AII, AII | AY072723, EF507674, U57897 | AII-1 |
| ISSGd107 | AII, AII, AII | AY072724, EU278608, U57897 | AII-2 |
| Swecat171 | AIII, AIII, AIII | DQ650649, EU637582, EU781002 | AIII-1 |
| Swesheep069 | E,E,E | DQ116624, DQ182605, EU781019 | MLGEI |
| Swesheep026 | E,E,E | EU769215, DQ182605, EU781019 | MLGEII |
| Ly7 | E3,E3,E1 | KF843934, KF843925, KF843941 | MLGE1 |
| Ly10 | E1,E3,E1 | KF843932, KF843925, KF843941 | MLGE2 |
| Zm68 | E2,E1,E1 | KF843933, KF843923, KF843941 | MLGE3 |
| Sq51 | E3,E2,E1 | KF843934, KF843924, KF843941 | MLGE4 |
| Ly24 | E3,E1,E3 | KF843934, KF843923, KF843943 | MLGE5 |
| Dy61 | E5,E1,E1 | KF843936, KF843923, KF843941 | MLGE6 |
| Ly34 (1) | E4,E2,E1 | KF843935, KF843924, KF843941 | MLGE7 |
| Ly13 (1) | E6,E3,E6 | KF843937, KF843925, KF843946 | MLGE8 |
| Jz37 (1) | E1,E3,E4 | KF843932, KF843925, KF843944 | MLGE9 |
: Pooled sample.
: Present study.
Figure 4Phylogenetic relationships of G. duodenalis MLGs.
The phylogenetic tree was constructed using a concatenated dataset of the bg, tpi, and gdh gene sequences, and a maximum likelihood analysis and neighbor-joining analysis generated identical topologies. Sequences from this and previous studies are included in the analysis. Bootstrap values >50% are shown. G. duodenalis MLGs identified in this study are indicated by black triangles.