Literature DB >> 24952645

Tracking metabolite dynamics in plants via indirect 13C chemical shift imaging with an interleaved variable density acquisition weighted sampling pattern.

Johannes Fuchs1, Gerd Melkus, Ljudmilla Borisjuk, Peter Jakob.   

Abstract

OBJECTIVE: Developing and evaluating an improved sampling pattern to track the dynamics of labeled substances in plants using indirect (13)C chemical shift imaging.
MATERIALS AND METHODS: An algorithm to split an acquisition weighted sampling pattern into several undersampled sub-images is presented. The sampling patterns are used in CSI moving phantom experiments as well as in in vivo POCE-CSI experiments on barley stem and grain. Reconstruction is performed traditionally or by compressed sensing.
RESULTS: The moving phantom experiments show that the sampling pattern can reduce motion artifacts at the cost of an increased overall noise. The in vivo experiments demonstrate the feasibility of extracting a time series from a single imaging experiment.
CONCLUSION: The sampling pattern is suitable for tracking the uptake of label substances into plant material. The use of compressed sensing allows an increased spatial and temporal resolution.

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Year:  2014        PMID: 24952645     DOI: 10.1007/s10334-014-0453-4

Source DB:  PubMed          Journal:  MAGMA        ISSN: 0968-5243            Impact factor:   2.310


  13 in total

1.  Accurate phosphorus metabolite images of the human heart by 3D acquisition-weighted CSI.

Authors:  R Pohmann; M von Kienlin
Journal:  Magn Reson Med       Date:  2001-05       Impact factor: 4.668

2.  Efficient k-space sampling by density-weighted phase-encoding.

Authors:  Andreas Greiser; Markus von Kienlin
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3.  Sparse MRI: The application of compressed sensing for rapid MR imaging.

Authors:  Michael Lustig; David Donoho; John M Pauly
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4.  Interleaved variable density sampling with a constrained parallel imaging reconstruction for dynamic contrast-enhanced MR angiography.

Authors:  Kang Wang; Reed F Busse; James H Holmes; Philip J Beatty; Jean H Brittain; Christopher J Francois; Scott B Reeder; Jiang Du; Frank R Korosec
Journal:  Magn Reson Med       Date:  2011-02-28       Impact factor: 4.668

5.  Theoretical evaluation and comparison of fast chemical shift imaging methods.

Authors:  R Pohmann; M von Kienlin; A Haase
Journal:  J Magn Reson       Date:  1997-12       Impact factor: 2.229

6.  MR fluoroscopy: technical feasibility.

Authors:  S J Riederer; T Tasciyan; F Farzaneh; J N Lee; R C Wright; R J Herfkens
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7.  Combined noninvasive imaging and modeling approaches reveal metabolic compartmentation in the barley endosperm.

Authors:  Hardy Rolletschek; Gerd Melkus; Eva Grafahrend-Belau; Johannes Fuchs; Nicolas Heinzel; Falk Schreiber; Peter M Jakob; Ljudmilla Borisjuk
Journal:  Plant Cell       Date:  2011-08-19       Impact factor: 11.277

8.  Dynamic ¹³C/¹ H NMR imaging uncovers sugar allocation in the living seed.

Authors:  Gerd Melkus; Hardy Rolletschek; Johannes Fuchs; Volodymyr Radchuk; Eva Grafahrend-Belau; Nese Sreenivasulu; Twan Rutten; Diana Weier; Nicolas Heinzel; Falk Schreiber; Thomas Altmann; Peter M Jakob; Ljudmilla Borisjuk
Journal:  Plant Biotechnol J       Date:  2011-04-28       Impact factor: 9.803

9.  1H detected (13)C echo planar imaging.

Authors:  Alex M J Hudson; Walter Köckenberger; Michael Heidenreich; Narayanan Chandrakumar; Rainer Kimmich; Richard Bowtell
Journal:  J Magn Reson       Date:  2002-03       Impact factor: 2.229

Review 10.  Endosperm transfer cell-specific genes and proteins: structure, function and applications in biotechnology.

Authors:  Sergiy Lopato; Nikolai Borisjuk; Peter Langridge; Maria Hrmova
Journal:  Front Plant Sci       Date:  2014-02-27       Impact factor: 5.753

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  1 in total

Review 1.  Multinuclear MRI in Drug Discovery.

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Journal:  Molecules       Date:  2022-10-01       Impact factor: 4.927

  1 in total

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