Literature DB >> 24948436

Transposon mutagenesis of the extremely thermophilic bacterium Thermus thermophilus HB27.

Jennifer F Carr1, Steven T Gregory, Albert E Dahlberg.   

Abstract

Thermus thermophilus is an extremely thermophilic bacterium that grows between 50 and 80 °C and is an excellent model organism not only for understanding life at high temperature but also for its biotechnological and industrial applications. Multiple molecular capabilities are available including targeted gene inactivation and the use of shuttle plasmids that replicate in T. thermophilus and Escherichia coli; however, the ability to disrupt gene function randomly by transposon insertion has not been developed. Here we report a detailed method of transposon mutagenesis of T. thermophilus HB27 based on the EZ-Tn5 system from Epicentre Biotechnologies. We were able to generate insertion mutations throughout the chromosome by in vitro transposition and transformation with mutagenized genomic DNA. We also report that an additional step, one that fills in single stranded gaps in donor DNA generated by the transposition reaction, was essential for successful mutagenesis. We anticipate that our method of transposon mutagenesis will enable further genetic development of T. thermophilus and may also be valuable for similar endeavors with other under-developed organisms.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24948436      PMCID: PMC4272677          DOI: 10.1007/s00792-014-0663-8

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  49 in total

Review 1.  Bacterial RNA polymerases: the wholo story.

Authors:  Katsuhiko S Murakami; Seth A Darst
Journal:  Curr Opin Struct Biol       Date:  2003-02       Impact factor: 6.809

Review 2.  What recent ribosome structures have revealed about the mechanism of translation.

Authors:  T Martin Schmeing; V Ramakrishnan
Journal:  Nature       Date:  2009-10-18       Impact factor: 49.962

3.  Translation initiation factor IF1 is essential for cell viability in Escherichia coli.

Authors:  H S Cummings; J W Hershey
Journal:  J Bacteriol       Date:  1994-01       Impact factor: 3.490

4.  Transfer of transposon Tn916 from Bacillus subtilis to Thermus aquaticus.

Authors:  S Sen; P Oriel
Journal:  FEMS Microbiol Lett       Date:  1990-01-15       Impact factor: 2.742

5.  Comparative genomics of Thermus thermophilus: Plasticity of the megaplasmid and its contribution to a thermophilic lifestyle.

Authors:  Holger Brüggemann; Chaoyin Chen
Journal:  J Biotechnol       Date:  2006-05-19       Impact factor: 3.307

6.  Nucleotide sequence of the cryptic plasmid pTT8 from Thermus thermophilus HB8 and isolation and characterization of its high-copy-number mutant.

Authors:  Goh Takayama; Takehide Kosuge; Hideaki Maseda; Akira Nakamura; Takayuki Hoshino
Journal:  Plasmid       Date:  2004-05       Impact factor: 3.466

7.  A key presynaptic role in transformation for a widespread bacterial protein: DprA conveys incoming ssDNA to RecA.

Authors:  Isabelle Mortier-Barrière; Marion Velten; Pauline Dupaigne; Nicolas Mirouze; Olivier Piétrement; Stephen McGovern; Gwennaele Fichant; Bernard Martin; Philippe Noirot; Eric Le Cam; Patrice Polard; Jean-Pierre Claverys
Journal:  Cell       Date:  2007-09-07       Impact factor: 41.582

8.  The genome sequence of the extreme thermophile Thermus thermophilus.

Authors:  Anke Henne; Holger Brüggemann; Carsten Raasch; Arnim Wiezer; Thomas Hartsch; Heiko Liesegang; Andre Johann; Tanja Lienard; Olivia Gohl; Rosa Martinez-Arias; Carsten Jacobi; Vytaute Starkuviene; Silke Schlenczeck; Silke Dencker; Robert Huber; Hans-Peter Klenk; Wilfried Kramer; Rainer Merkl; Gerhard Gottschalk; Hans-Joachim Fritz
Journal:  Nat Biotechnol       Date:  2004-04-04       Impact factor: 54.908

9.  Transposition of an insertion sequence, ISTth7, in the genome of the extreme thermophile Thermus thermophilus HB8.

Authors:  Steven T Gregory; Albert E Dahlberg
Journal:  FEMS Microbiol Lett       Date:  2008-10-28       Impact factor: 2.742

10.  Genetic transformation of the extreme thermophile Thermus thermophilus and of other Thermus spp.

Authors:  Y Koyama; T Hoshino; N Tomizuka; K Furukawa
Journal:  J Bacteriol       Date:  1986-04       Impact factor: 3.490

View more
  5 in total

1.  Engineering the genome of Thermus thermophilus using a counterselectable marker.

Authors:  Jennifer F Carr; Michael E Danziger; Athena L Huang; Albert E Dahlberg; Steven T Gregory
Journal:  J Bacteriol       Date:  2015-01-20       Impact factor: 3.490

2.  A reporter gene system for the precise measurement of promoter activity in Thermus thermophilus HB27.

Authors:  Atsushi Fujita; Takaaki Sato; Yoshinori Koyama; Yoshio Misumi
Journal:  Extremophiles       Date:  2015-09-23       Impact factor: 2.395

3.  Development of the Multiple Gene Knockout System with One-Step PCR in Thermoacidophilic Crenarchaeon Sulfolobus acidocaldarius.

Authors:  Shoji Suzuki; Norio Kurosawa
Journal:  Archaea       Date:  2017-10-31       Impact factor: 3.273

4.  Frequent Transposition of Multiple Insertion Sequences in Geobacillus kaustophilus HTA426.

Authors:  Hirokazu Suzuki; Tatsunari Taketani; Misaki Tanabiki; Misaki Ohara; Jyumpei Kobayashi; Takashi Ohshiro
Journal:  Front Microbiol       Date:  2021-03-24       Impact factor: 5.640

5.  Random mutagenesis of a hyperthermophilic archaeon identified tRNA modifications associated with cellular hyperthermotolerance.

Authors:  Izumi Orita; Ryohei Futatsuishi; Kyoko Adachi; Takayuki Ohira; Akira Kaneko; Keiichi Minowa; Miho Suzuki; Takeshi Tamura; Satoshi Nakamura; Tadayuki Imanaka; Tsutomu Suzuki; Toshiaki Fukui
Journal:  Nucleic Acids Res       Date:  2019-02-28       Impact factor: 16.971

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.