| Literature DB >> 24940226 |
Masayuki Nagasawa1, Yuji Sasanuma1, Hyuma Masu2.
Abstract
The title compound, C17H18N2S2, exhibits a trans-trans-trans-gauche(+) (tttg (+)) conformation with regard to the NH-CH2-CH2-CH2-NH bond sequence. In the crystal, mol-ecules are connected by N-H⋯S=C and C-H⋯S=C hydrogen bonds, forming a herringbone arrangement along the c-axis direction. The two thioamide groups make dihedral angles of 43.0 (2) and 33.1 (2)° with the adjacent phenyl rings.Entities:
Year: 2014 PMID: 24940226 PMCID: PMC4051009 DOI: 10.1107/S160053681400974X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H18N2S2 | |
| Orthorhombic, | Cu |
| µ = 2.97 mm−1 | |
| Prismatic, yellow | |
| 0.30 × 0.20 × 0.10 mm | |
| Bruker APEXII Ultra CCD area-detector diffractometer | 2882 independent reflections |
| Radiation source: Bruker TXS fine-focus rotating anode | 2736 reflections with |
| Bruker Helios multilayer mirror monochromator | |
| Phi and ω scans | θmax = 68.3°, θmin = 3.3° |
| Absorption correction: multi-scan ( | |
| 12276 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2882 reflections | (Δ/σ)max = 0.001 |
| 190 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| Experimental. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.04995 (15) | 0.30766 (10) | 0.42684 (5) | 0.0271 (3) | |
| C2 | 0.04043 (16) | 0.33224 (9) | 0.37326 (5) | 0.0261 (3) | |
| C3 | 0.15288 (18) | 0.39267 (10) | 0.35235 (5) | 0.0328 (3) | |
| H3 | 0.236 | 0.4175 | 0.3719 | 0.039* | |
| C4 | 0.1418 (2) | 0.41607 (11) | 0.30247 (6) | 0.0408 (4) | |
| H4 | 0.2193 | 0.4555 | 0.288 | 0.049* | |
| C5 | 0.0177 (2) | 0.38189 (12) | 0.27379 (6) | 0.0435 (4) | |
| H5 | 0.0109 | 0.3981 | 0.24 | 0.052* | |
| C6 | −0.0964 (2) | 0.32377 (11) | 0.29487 (6) | 0.0400 (4) | |
| H6 | −0.1823 | 0.3017 | 0.2756 | 0.048* | |
| C7 | −0.08486 (17) | 0.29786 (10) | 0.34432 (5) | 0.0318 (3) | |
| H7 | −0.1614 | 0.2572 | 0.3584 | 0.038* | |
| C8 | −0.00172 (17) | 0.17921 (12) | 0.48748 (6) | 0.0380 (4) | |
| H8A | −0.092 | 0.1351 | 0.487 | 0.046* | |
| H8B | −0.0292 | 0.231 | 0.5101 | 0.046* | |
| C9 | 0.14371 (17) | 0.12807 (10) | 0.50784 (5) | 0.0340 (3) | |
| H9A | 0.2339 | 0.172 | 0.5108 | 0.041* | |
| H9B | 0.1747 | 0.0765 | 0.4855 | 0.041* | |
| C10 | 0.09938 (18) | 0.08896 (11) | 0.55852 (6) | 0.0364 (3) | |
| H10A | 0.0758 | 0.1419 | 0.5809 | 0.044* | |
| H10B | 0.0019 | 0.051 | 0.5553 | 0.044* | |
| C11 | 0.19903 (16) | −0.02401 (9) | 0.61993 (5) | 0.0268 (3) | |
| C12 | 0.33873 (16) | −0.07725 (9) | 0.63952 (5) | 0.0270 (3) | |
| C13 | 0.34922 (18) | −0.09590 (10) | 0.69027 (5) | 0.0330 (3) | |
| H13 | 0.2681 | −0.0749 | 0.7118 | 0.04* | |
| C14 | 0.4785 (2) | −0.14514 (12) | 0.70912 (6) | 0.0417 (4) | |
| H14 | 0.4858 | −0.1563 | 0.7435 | 0.05* | |
| C15 | 0.5967 (2) | −0.17792 (12) | 0.67788 (7) | 0.0478 (4) | |
| H15 | 0.6842 | −0.2117 | 0.6908 | 0.057* | |
| C16 | 0.5859 (2) | −0.16086 (13) | 0.62749 (7) | 0.0480 (4) | |
| H16 | 0.6657 | −0.1839 | 0.6061 | 0.058* | |
| C17 | 0.45871 (19) | −0.11019 (11) | 0.60823 (6) | 0.0368 (3) | |
| H17 | 0.4534 | −0.098 | 0.5739 | 0.044* | |
| N1 | 0.01881 (14) | 0.21803 (9) | 0.43765 (5) | 0.0324 (3) | |
| H1 | 0.0098 | 0.1789 | 0.4129 | 0.039* | |
| N2 | 0.22457 (14) | 0.03070 (8) | 0.58067 (4) | 0.0301 (3) | |
| H2 | 0.3197 | 0.0319 | 0.5676 | 0.036* | |
| S1 | 0.08969 (5) | 0.39123 (3) | 0.46914 (2) | 0.03743 (13) | |
| S2 | 0.01763 (4) | −0.03524 (3) | 0.64602 (2) | 0.03725 (13) |
| C1 | 0.0195 (6) | 0.0338 (7) | 0.0279 (7) | 0.0044 (5) | −0.0002 (5) | 0.0037 (5) |
| C2 | 0.0273 (6) | 0.0256 (6) | 0.0253 (6) | 0.0051 (5) | 0.0003 (5) | 0.0011 (5) |
| C3 | 0.0312 (7) | 0.0339 (7) | 0.0333 (8) | 0.0012 (6) | 0.0037 (6) | 0.0018 (5) |
| C4 | 0.0464 (9) | 0.0401 (8) | 0.0360 (8) | 0.0058 (7) | 0.0134 (7) | 0.0093 (6) |
| C5 | 0.0620 (11) | 0.0451 (9) | 0.0235 (7) | 0.0163 (8) | 0.0029 (7) | 0.0045 (6) |
| C6 | 0.0516 (9) | 0.0382 (8) | 0.0301 (7) | 0.0063 (7) | −0.0113 (6) | −0.0039 (6) |
| C7 | 0.0360 (8) | 0.0273 (6) | 0.0320 (7) | 0.0012 (5) | −0.0039 (6) | 0.0008 (5) |
| C8 | 0.0310 (7) | 0.0457 (9) | 0.0372 (8) | 0.0039 (6) | 0.0028 (6) | 0.0188 (7) |
| C9 | 0.0303 (7) | 0.0361 (7) | 0.0356 (8) | 0.0006 (6) | −0.0008 (6) | 0.0106 (6) |
| C10 | 0.0330 (8) | 0.0413 (8) | 0.0349 (8) | 0.0058 (6) | −0.0007 (6) | 0.0122 (6) |
| C11 | 0.0315 (7) | 0.0231 (6) | 0.0259 (6) | −0.0012 (5) | −0.0023 (5) | −0.0014 (5) |
| C12 | 0.0296 (7) | 0.0233 (6) | 0.0281 (6) | −0.0012 (5) | −0.0016 (5) | 0.0010 (5) |
| C13 | 0.0391 (8) | 0.0325 (7) | 0.0275 (7) | 0.0016 (6) | 0.0002 (6) | 0.0016 (5) |
| C14 | 0.0506 (9) | 0.0427 (8) | 0.0317 (8) | 0.0055 (7) | −0.0086 (7) | 0.0083 (7) |
| C15 | 0.0453 (9) | 0.0478 (9) | 0.0502 (10) | 0.0152 (7) | −0.0079 (7) | 0.0108 (8) |
| C16 | 0.0438 (9) | 0.0545 (10) | 0.0456 (9) | 0.0193 (8) | 0.0080 (7) | 0.0056 (8) |
| C17 | 0.0412 (8) | 0.0414 (8) | 0.0279 (7) | 0.0074 (7) | 0.0028 (6) | 0.0045 (6) |
| N1 | 0.0338 (6) | 0.0338 (6) | 0.0298 (6) | 0.0025 (5) | −0.0009 (5) | 0.0071 (5) |
| N2 | 0.0266 (6) | 0.0323 (6) | 0.0315 (6) | 0.0001 (4) | −0.0015 (5) | 0.0075 (5) |
| S1 | 0.0403 (2) | 0.0455 (2) | 0.0265 (2) | 0.00085 (15) | −0.00578 (14) | −0.00393 (14) |
| S2 | 0.0315 (2) | 0.0413 (2) | 0.0390 (2) | 0.00656 (14) | 0.00747 (14) | 0.00916 (15) |
| C1—N1 | 1.3256 (18) | C9—H9B | 0.98 |
| C1—C2 | 1.4860 (17) | C10—N2 | 1.4596 (18) |
| C1—S1 | 1.6741 (14) | C10—H10A | 0.98 |
| C2—C3 | 1.390 (2) | C10—H10B | 0.98 |
| C2—C7 | 1.393 (2) | C11—N2 | 1.3270 (17) |
| C3—C4 | 1.386 (2) | C11—C12 | 1.4867 (18) |
| C3—H3 | 0.94 | C11—S2 | 1.6795 (14) |
| C4—C5 | 1.381 (3) | C12—C17 | 1.391 (2) |
| C4—H4 | 0.94 | C12—C13 | 1.3942 (19) |
| C5—C6 | 1.381 (2) | C13—C14 | 1.382 (2) |
| C5—H5 | 0.94 | C13—H13 | 0.94 |
| C6—C7 | 1.384 (2) | C14—C15 | 1.379 (2) |
| C6—H6 | 0.94 | C14—H14 | 0.94 |
| C7—H7 | 0.94 | C15—C16 | 1.381 (2) |
| C8—N1 | 1.4595 (18) | C15—H15 | 0.94 |
| C8—C9 | 1.5175 (19) | C16—C17 | 1.383 (2) |
| C8—H8A | 0.98 | C16—H16 | 0.94 |
| C8—H8B | 0.98 | C17—H17 | 0.94 |
| C9—C10 | 1.518 (2) | N1—H1 | 0.87 |
| C9—H9A | 0.98 | N2—H2 | 0.87 |
| N1—C1—C2 | 115.21 (12) | N2—C10—C9 | 113.41 (12) |
| N1—C1—S1 | 124.33 (11) | N2—C10—H10A | 108.9 |
| C2—C1—S1 | 120.40 (10) | C9—C10—H10A | 108.9 |
| C3—C2—C7 | 119.80 (13) | N2—C10—H10B | 108.9 |
| C3—C2—C1 | 120.04 (12) | C9—C10—H10B | 108.9 |
| C7—C2—C1 | 120.11 (12) | H10A—C10—H10B | 107.7 |
| C4—C3—C2 | 119.58 (14) | N2—C11—C12 | 116.80 (12) |
| C4—C3—H3 | 120.2 | N2—C11—S2 | 122.25 (10) |
| C2—C3—H3 | 120.2 | C12—C11—S2 | 120.93 (10) |
| C5—C4—C3 | 120.58 (15) | C17—C12—C13 | 119.01 (13) |
| C5—C4—H4 | 119.7 | C17—C12—C11 | 121.46 (12) |
| C3—C4—H4 | 119.7 | C13—C12—C11 | 119.52 (12) |
| C4—C5—C6 | 119.84 (14) | C14—C13—C12 | 120.27 (14) |
| C4—C5—H5 | 120.1 | C14—C13—H13 | 119.9 |
| C6—C5—H5 | 120.1 | C12—C13—H13 | 119.9 |
| C5—C6—C7 | 120.29 (14) | C15—C14—C13 | 120.44 (14) |
| C5—C6—H6 | 119.9 | C15—C14—H14 | 119.8 |
| C7—C6—H6 | 119.9 | C13—C14—H14 | 119.8 |
| C6—C7—C2 | 119.87 (14) | C14—C15—C16 | 119.57 (14) |
| C6—C7—H7 | 120.1 | C14—C15—H15 | 120.2 |
| C2—C7—H7 | 120.1 | C16—C15—H15 | 120.2 |
| N1—C8—C9 | 114.63 (12) | C15—C16—C17 | 120.60 (15) |
| N1—C8—H8A | 108.6 | C15—C16—H16 | 119.7 |
| C9—C8—H8A | 108.6 | C17—C16—H16 | 119.7 |
| N1—C8—H8B | 108.6 | C16—C17—C12 | 120.09 (14) |
| C9—C8—H8B | 108.6 | C16—C17—H17 | 120.0 |
| H8A—C8—H8B | 107.6 | C12—C17—H17 | 120.0 |
| C8—C9—C10 | 107.59 (12) | C1—N1—C8 | 125.74 (13) |
| C8—C9—H9A | 110.2 | C1—N1—H1 | 117.1 |
| C10—C9—H9A | 110.2 | C8—N1—H1 | 117.1 |
| C8—C9—H9B | 110.2 | C11—N2—C10 | 122.59 (12) |
| C10—C9—H9B | 110.2 | C11—N2—H2 | 118.7 |
| H9A—C9—H9B | 108.5 | C10—N2—H2 | 118.7 |
| H··· | ||||
| N1—H1···S2i | 0.87 | 2.59 | 3.4412 (14) | 168 |
| N2—H2···S1ii | 0.87 | 2.69 | 3.5135 (12) | 157 |
| C17—H17···S1iii | 0.94 | 2.85 | 3.7665 (17) | 166 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯S2i | 0.87 | 2.59 | 3.4412 (14) | 168 |
| N2—H2⋯S1ii | 0.87 | 2.69 | 3.5135 (12) | 157 |
| C17—H17⋯S1iii | 0.94 | 2.85 | 3.7665 (17) | 166 |
Symmetry codes: (i) ; (ii) ; (iii) .