Literature DB >> 24924300

An efficient and extendable python library to analyze neuronal morphologies.

Benjamin Torben-Nielsen1.   

Abstract

Mesh：

Year:  2014        PMID： 24924300     DOI： 10.1007/s12021-014-9232-7

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN： 1539-2791


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  9 in total

1.  Neuron imaging with Neurolucida--a PC-based system for image combining microscopy.

Authors:  J R Glaser; E M Glaser
Journal:  Comput Med Imaging Graph       Date:  1990 Sep-Oct       Impact factor: 4.790

2.  Tree asymmetry--a sensitive and practical measure for binary topological trees.

Authors:  J Van Pelt; H B Uylings; R W Verwer; R J Pentney; M J Woldenberg
Journal:  Bull Math Biol       Date:  1992-09       Impact factor: 1.758

3.  NeuroMorpho.Org: a central resource for neuronal morphologies.

Authors:  Giorgio A Ascoli; Duncan E Donohue; Maryam Halavi
Journal:  J Neurosci       Date:  2007-08-29       Impact factor: 6.167

4.  L-Measure: a web-accessible tool for the analysis, comparison and search of digital reconstructions of neuronal morphologies.

Authors:  Ruggero Scorcioni; Sridevi Polavaram; Giorgio A Ascoli
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

5.  An on-line archive of reconstructed hippocampal neurons.

Authors:  R C Cannon; D A Turner; G K Pyapali; H V Wheal
Journal:  J Neurosci Methods       Date:  1998-10-01       Impact factor: 2.390

Review 6.  Numerical relationships between geniculocortical afferents and pyramidal cell modules in cat primary visual cortex.

Authors:  A Peters; B R Payne
Journal:  Cereb Cortex       Date:  1993 Jan-Feb       Impact factor: 5.357

Review 7.  Dendritic anomalies in disorders associated with mental retardation.

Authors:  W E Kaufmann; H W Moser
Journal:  Cereb Cortex       Date:  2000-10       Impact factor: 5.357

8.  An inverse approach for elucidating dendritic function.

Authors:  Benjamin Torben-Nielsen; Klaus M Stiefel
Journal:  Front Comput Neurosci       Date:  2010-09-23       Impact factor: 2.380

9.  One rule to grow them all: a general theory of neuronal branching and its practical application.

Authors:  Hermann Cuntz; Friedrich Forstner; Alexander Borst; Michael Häusser
Journal:  PLoS Comput Biol       Date:  2010-08-05       Impact factor: 4.475
  9 in total
  8 in total

1.  Morphological Neuron Classification Based on Dendritic Tree Hierarchy.

Authors:  Evelyn Perez Cervantes; Cesar Henrique Comin; Roberto Marcondes Cesar Junior; Luciano da Fontoura Costa
Journal:  Neuroinformatics       Date:  2019-01

2.  N3DFix: an Algorithm for Automatic Removal of Swelling Artifacts in Neuronal Reconstructions.

Authors:  Eduardo Conde-Sousa; Peter Szücs; Hanchuan Peng; Paulo Aguiar
Journal:  Neuroinformatics       Date:  2017-01

3.  Efficient metadata mining of web-accessible neural morphologies.

Authors:  Masood A Akram; Bengt Ljungquist; Giorgio A Ascoli
Journal:  Prog Biophys Mol Biol       Date:  2021-05-19       Impact factor: 3.667

4.  Circuit-Specific Dendritic Development in the Piriform Cortex.

Authors:  Laura Moreno-Velasquez; Hung Lo; Stephen Lenzi; Malte Kaehne; Jörg Breustedt; Dietmar Schmitz; Sten Rüdiger; Friedrich W Johenning
Journal:  eNeuro       Date:  2020-06-19

5.  Adaptations during Maturation in an Identified Honeybee Interneuron Responsive to Waggle Dance Vibration Signals.

Authors:  Ajayrama Kumaraswamy; Hiroyuki Ai; Kazuki Kai; Hidetoshi Ikeno; Thomas Wachtler
Journal:  eNeuro       Date:  2019-09-06

6.  REMOD: A Tool for Analyzing and Remodeling the Dendritic Architecture of Neural Cells.

Authors:  Panagiotis Bozelos; Stefanos S Stefanou; Georgios Bouloukakis; Constantinos Melachrinos; Panayiota Poirazi
Journal:  Front Neuroanat       Date:  2016-01-06       Impact factor: 3.856

7.  An open repository for single-cell reconstructions of the brain forest.

Authors:  Masood A Akram; Sumit Nanda; Patricia Maraver; Rubén Armañanzas; Giorgio A Ascoli
Journal:  Sci Data       Date:  2018-02-27       Impact factor: 6.444

8.  Predicting Synaptic Connectivity for Large-Scale Microcircuit Simulations Using Snudda.

Authors:  J J Johannes Hjorth; Jeanette Hellgren Kotaleski; Alexander Kozlov
Journal:  Neuroinformatics       Date:  2021-07-19
  8 in total

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