Literature DB >> 2224829

Neuron imaging with Neurolucida--a PC-based system for image combining microscopy.

J R Glaser1, E M Glaser.   

Abstract

Neurolucida is a new software package for performing 3-D neuron mapping and tracing to 0.5 micron precision through the oculars of a microscope. It incorporates computer controlled stage movement in three dimensions. Sections are limited in size only by the stage dimensions. An on-line, direct view image editor is provided as are dynamic image rotations in color and morphometric analyses. Neurolucida is written in 'C' and runs on PC ATs, XTs, and PS/2s using DOS and VGA, EGA, or NTSC graphics. Neurolucida has a video mode compatible with frame grabbers, thereby permitting its application to video microscopy.

Mesh:

Year:  1990        PMID: 2224829     DOI: 10.1016/0895-6111(90)90105-k

Source DB:  PubMed          Journal:  Comput Med Imaging Graph        ISSN: 0895-6111            Impact factor:   4.790


  50 in total

1.  The DIADEM metric: comparing multiple reconstructions of the same neuron.

Authors:  Todd A Gillette; Kerry M Brown; Giorgio A Ascoli
Journal:  Neuroinformatics       Date:  2011-09

2.  Improved biocytin labeling and neuronal 3D reconstruction.

Authors:  Manuel Marx; Robert H Günter; Werner Hucko; Gabriele Radnikow; Dirk Feldmeyer
Journal:  Nat Protoc       Date:  2012-02-02       Impact factor: 13.491

3.  Whole-body tissue stabilization and selective extractions via tissue-hydrogel hybrids for high-resolution intact circuit mapping and phenotyping.

Authors:  Ken Y Chan; Nicholas C Flytzanis; Bin Yang; Jennifer B Treweek; Benjamin E Deverman; Alon Greenbaum; Antti Lignell; Cheng Xiao; Long Cai; Mark S Ladinsky; Pamela J Bjorkman; Charless C Fowlkes; Viviana Gradinaru
Journal:  Nat Protoc       Date:  2015-10-22       Impact factor: 13.491

4.  Measuring carotid artery stenosis--comparison of postmortem arteriograms with the planimetric gold standard.

Authors:  Gernot Schulte-Altedorneburg; Dirk W Droste; Józef Kollár; Torsten Beyna; Szabolcs Felszeghy; László Módis; Csaba Hegedüs; E Bernd Ringelstein; László Csiba
Journal:  J Neurol       Date:  2005-03-23       Impact factor: 4.849

5.  A cross-platform freeware tool for digital reconstruction of neuronal arborizations from image stacks.

Authors:  Kerry M Brown; Duncan E Donohue; Giampaolo D'Alessandro; Giorgio A Ascoli
Journal:  Neuroinformatics       Date:  2005

Review 6.  Brain maps and connectivity representation.

Authors:  Alessandro Vercelli
Journal:  Neuroinformatics       Date:  2006

7.  The natverse, a versatile toolbox for combining and analysing neuroanatomical data.

Authors:  Alexander Shakeel Bates; James D Manton; Sridhar R Jagannathan; Marta Costa; Philipp Schlegel; Torsten Rohlfing; Gregory Sxe Jefferis
Journal:  Elife       Date:  2020-04-14       Impact factor: 8.140

8.  Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging.

Authors:  Firdaus Janoos; Kishore Mosaliganti; Xiaoyin Xu; Raghu Machiraju; Kun Huang; Stephen T C Wong
Journal:  Med Image Anal       Date:  2008-07-24       Impact factor: 8.545

9.  ISAVS: Interactive Scalable Analysis and Visualization System.

Authors:  Steve Petruzza; Aniketh Venkat; Attila Gyulassy; Giorgio Scorzelli; Valerio Pascucci; Frederick Federer; Alessandra Angelucci; Peer-Timo Bremer
Journal:  SIGGRAPH Asia 2017 Symp Vis (2017)       Date:  2017-11

Review 10.  Neuronal morphology goes digital: a research hub for cellular and system neuroscience.

Authors:  Ruchi Parekh; Giorgio A Ascoli
Journal:  Neuron       Date:  2013-03-20       Impact factor: 17.173

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