Literature DB >> 24919828

Statistical issues in the comparison of quantitative imaging biomarker algorithms using pulmonary nodule volume as an example.

Nancy A Obuchowski1, Huiman X Barnhart2, Andrew J Buckler3, Gene Pennello4, Xiao-Feng Wang5, Jayashree Kalpathy-Cramer6, Hyun J Grace Kim7, Anthony P Reeves8.   

Abstract

Quantitative imaging biomarkers are being used increasingly in medicine to diagnose and monitor patients' disease. The computer algorithms that measure quantitative imaging biomarkers have different technical performance characteristics. In this paper we illustrate the appropriate statistical methods for assessing and comparing the bias, precision, and agreement of computer algorithms. We use data from three studies of pulmonary nodules. The first study is a small phantom study used to illustrate metrics for assessing repeatability. The second study is a large phantom study allowing assessment of four algorithms' bias and reproducibility for measuring tumor volume and the change in tumor volume. The third study is a small clinical study of patients whose tumors were measured on two occasions. This study allows a direct assessment of six algorithms' performance for measuring tumor change. With these three examples we compare and contrast study designs and performance metrics, and we illustrate the advantages and limitations of various common statistical methods for quantitative imaging biomarker studies.
© The Author(s) 2014 Reprints and permissions: sagepub.co.uk/journalsPermissions.nav.

Entities:  

Keywords:  agreement; bias; coverage probability; intraclass correlation coefficient; limits of agreement; repeatability; reproducibility

Mesh:

Substances:

Year:  2014        PMID: 24919828      PMCID: PMC4263699          DOI: 10.1177/0962280214537392

Source DB:  PubMed          Journal:  Stat Methods Med Res        ISSN: 0962-2802            Impact factor:   3.021


  18 in total

Review 1.  Measuring agreement in method comparison studies.

Authors:  J M Bland; D G Altman
Journal:  Stat Methods Med Res       Date:  1999-06       Impact factor: 3.021

2.  New guidelines to evaluate the response to treatment in solid tumors. European Organization for Research and Treatment of Cancer, National Cancer Institute of the United States, National Cancer Institute of Canada.

Authors:  P Therasse; S G Arbuck; E A Eisenhauer; J Wanders; R S Kaplan; L Rubinstein; J Verweij; M Van Glabbeke; A T van Oosterom; M C Christian; S G Gwyther
Journal:  J Natl Cancer Inst       Date:  2000-02-02       Impact factor: 13.506

3.  Three-dimensional segmentation and growth-rate estimation of small pulmonary nodules in helical CT images.

Authors:  William J Kostis; Anthony P Reeves; David F Yankelevitz; Claudia I Henschke
Journal:  IEEE Trans Med Imaging       Date:  2003-10       Impact factor: 10.048

4.  Zone of transition: a potential source of error in tumor volume estimation.

Authors:  Lijuan Zhang; David F Yankelevitz; Claudia I Henschke; Artit C Jirapatnakul; Anthony P Reeves; Darryl Carter
Journal:  Radiology       Date:  2010-08       Impact factor: 11.105

5.  The Lung Image Database Consortium (LIDC): a comparison of different size metrics for pulmonary nodule measurements.

Authors:  Anthony P Reeves; Alberto M Biancardi; Tatiyana V Apanasovich; Charles R Meyer; Heber MacMahon; Edwin J R van Beek; Ella A Kazerooni; David Yankelevitz; Michael F McNitt-Gray; Geoffrey McLennan; Samuel G Armato; Claudia I Henschke; Denise R Aberle; Barbara Y Croft; Laurence P Clarke
Journal:  Acad Radiol       Date:  2007-12       Impact factor: 3.173

6.  The emerging science of quantitative imaging biomarkers terminology and definitions for scientific studies and regulatory submissions.

Authors:  Larry G Kessler; Huiman X Barnhart; Andrew J Buckler; Kingshuk Roy Choudhury; Marina V Kondratovich; Alicia Toledano; Alexander R Guimaraes; Ross Filice; Zheng Zhang; Daniel C Sullivan
Journal:  Stat Methods Med Res       Date:  2014-06-11       Impact factor: 3.021

7.  Pulmonary nodules detected at lung cancer screening: interobserver variability of semiautomated volume measurements.

Authors:  Hester A Gietema; Ying Wang; Dongming Xu; Rob J van Klaveren; Harry de Koning; Ernst Scholten; Johny Verschakelen; Gerhard Kohl; Matthijs Oudkerk; Mathias Prokop
Journal:  Radiology       Date:  2006-08-14       Impact factor: 11.105

Review 8.  Quantitative imaging biomarkers: a review of statistical methods for technical performance assessment.

Authors:  David L Raunig; Lisa M McShane; Gene Pennello; Constantine Gatsonis; Paul L Carson; James T Voyvodic; Richard L Wahl; Brenda F Kurland; Adam J Schwarz; Mithat Gönen; Gudrun Zahlmann; Marina V Kondratovich; Kevin O'Donnell; Nicholas Petrick; Patricia E Cole; Brian Garra; Daniel C Sullivan
Journal:  Stat Methods Med Res       Date:  2014-06-11       Impact factor: 3.021

Review 9.  Quantitative imaging biomarkers: a review of statistical methods for computer algorithm comparisons.

Authors:  Nancy A Obuchowski; Anthony P Reeves; Erich P Huang; Xiao-Feng Wang; Andrew J Buckler; Hyun J Grace Kim; Huiman X Barnhart; Edward F Jackson; Maryellen L Giger; Gene Pennello; Alicia Y Toledano; Jayashree Kalpathy-Cramer; Tatiyana V Apanasovich; Paul E Kinahan; Kyle J Myers; Dmitry B Goldgof; Daniel P Barboriak; Robert J Gillies; Lawrence H Schwartz; Daniel C Sullivan
Journal:  Stat Methods Med Res       Date:  2014-06-11       Impact factor: 3.021

10.  Effect of nodule characteristics on variability of semiautomated volume measurements in pulmonary nodules detected in a lung cancer screening program.

Authors:  Ying Wang; Rob J van Klaveren; Hester J van der Zaag-Loonen; Geertruida H de Bock; Hester A Gietema; Dong Ming Xu; Anne L M Leusveld; Harry J de Koning; Ernst T Scholten; Johny Verschakelen; Mathias Prokop; Matthijs Oudkerk
Journal:  Radiology       Date:  2008-08       Impact factor: 11.105

View more
  19 in total

1.  Metrology Standards for Quantitative Imaging Biomarkers.

Authors:  Daniel C Sullivan; Nancy A Obuchowski; Larry G Kessler; David L Raunig; Constantine Gatsonis; Erich P Huang; Marina Kondratovich; Lisa M McShane; Anthony P Reeves; Daniel P Barboriak; Alexander R Guimaraes; Richard L Wahl
Journal:  Radiology       Date:  2015-08-12       Impact factor: 11.105

2.  No-gold-standard evaluation of image-acquisition methods using patient data.

Authors:  Abhinav K Jha; Eric Frey
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-03-10

3.  Shear-wave elastography of the ulnar collateral ligament of the elbow in healthy volunteers: a pilot study.

Authors:  Nakul Gupta; John S Labis; Joshua Harris; Michael A Trakhtenbroit; Leif E Peterson; Robert A Jack; Patrick C McCulloch
Journal:  Skeletal Radiol       Date:  2019-01-31       Impact factor: 2.199

4.  Variability in CT lung-nodule volumetry: Effects of dose reduction and reconstruction methods.

Authors:  Stefano Young; Hyun J Grace Kim; Moe Moe Ko; War War Ko; Carlos Flores; Michael F McNitt-Gray
Journal:  Med Phys       Date:  2015-05       Impact factor: 4.071

Review 5.  Quality assurance and quantitative imaging biomarkers in low-dose CT lung cancer screening.

Authors:  Chara E Rydzak; Samuel G Armato; Ricardo S Avila; James L Mulshine; David F Yankelevitz; David S Gierada
Journal:  Br J Radiol       Date:  2017-10-27       Impact factor: 3.039

6.  Volumetry of low-contrast liver lesions with CT: Investigation of estimation uncertainties in a phantom study.

Authors:  Qin Li; Yongguang Liang; Qiao Huang; Min Zong; Benjamin Berman; Marios A Gavrielides; Lawrence H Schwartz; Binsheng Zhao; Nicholas Petrick
Journal:  Med Phys       Date:  2016-12       Impact factor: 4.071

Review 7.  Statistical Issues in Testing Conformance with the Quantitative Imaging Biomarker Alliance (QIBA) Profile Claims.

Authors:  Nancy A Obuchowski; Andrew Buckler; Paul Kinahan; Heather Chen-Mayer; Nicholas Petrick; Daniel P Barboriak; Jennifer Bullen; Huiman Barnhart; Daniel C Sullivan
Journal:  Acad Radiol       Date:  2016-02-18       Impact factor: 3.173

8.  Measurement Accuracy of Atherosclerotic Plaque Structure on CT Using Phantoms to Establish Ground Truth.

Authors:  Samantha St Pierre; Jenifer Siegelman; Nancy A Obuchowski; Xiaonan Ma; David Paik; Andrew J Buckler
Journal:  Acad Radiol       Date:  2017-05-24       Impact factor: 3.173

Review 9.  Quantitative imaging biomarkers: a review of statistical methods for computer algorithm comparisons.

Authors:  Nancy A Obuchowski; Anthony P Reeves; Erich P Huang; Xiao-Feng Wang; Andrew J Buckler; Hyun J Grace Kim; Huiman X Barnhart; Edward F Jackson; Maryellen L Giger; Gene Pennello; Alicia Y Toledano; Jayashree Kalpathy-Cramer; Tatiyana V Apanasovich; Paul E Kinahan; Kyle J Myers; Dmitry B Goldgof; Daniel P Barboriak; Robert J Gillies; Lawrence H Schwartz; Daniel C Sullivan
Journal:  Stat Methods Med Res       Date:  2014-06-11       Impact factor: 3.021

10.  Interpreting Change in Quantitative Imaging Biomarkers.

Authors:  Nancy A Obuchowski
Journal:  Acad Radiol       Date:  2017-12-01       Impact factor: 3.173

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.